The ADP-ribosylating thermozyme from Sulfolobus solfataricus is a DING protein

Biological Chemistry

Volumn 390, Issue 1, 2009, Pages 27-30

  Di Maro, Antimo ^a   De Maio, Anna ^b,c   Castellano, Sabrina ^b   Parente, Augusto ^a   Farina, Benedetta ^b,c   Faraone Mennella, Maria Rosaria ^b,c  

^a SECOND UNIVERSITY OF NAPLES   (Italy)

^b UNIVERSITY OF NAPLES FEDERICO II   (Italy)

^c NATIONAL INSTITUTE OF BIOSTRUCTURES AND BIOSYSTEMS   (Italy)

Author keywords

Archaeon; DING protein; Edman degradation; Poly(ADP ribose) polymerase; Sulfolobus solfataricus; Thermoprotein

Indexed keywords

BACTERIAL PROTEIN; PROTEIN DING; UNCLASSIFIED DRUG;

ADENOSINE DIPHOSPHATE RIBOSYLATION; AMINO ACID SEQUENCE; AMINO TERMINAL SEQUENCE; ARTICLE; BACTERIUM; CONTROLLED STUDY; NONHUMAN; PRIORITY JOURNAL; SULFOLOBUS SOLFATARICUS;

ADENOSINE DIPHOSPHATE; AMINO ACID MOTIFS; AMINO ACID SEQUENCE; ARCHAEAL PROTEINS; CONSERVED SEQUENCE; HUMANS; MOLECULAR SEQUENCE DATA; POLY(ADP-RIBOSE) POLYMERASES; SEQUENCE ALIGNMENT; SULFOLOBUS SOLFATARICUS;

ANIMALIA; ARCHAEA; BACTERIA (MICROORGANISMS); SULFOLOBUS SOLFATARICUS;

EID: 58249112168     PISSN: 14316730     EISSN: 14374315     Source Type: Journal    
DOI: 10.1515/BC.2009.006     Document Type: Article

References (22)

1. Ahn, S., Moniot, S., Elias, M., Chabriere, E., Kim, D., and Scott, K. (2007). Structure-function relationships in a bacterial DING protein. FEBS Lett. 581, 3455-3460.
2. Berna, A., Bernier, F., Scott, K., and Stuhlmuller, B. (2002). Ring up the curtain on DING proteins. FEBS Lett. 524, 6-10.
3. Berna, A., Bernier, F., Chabrière, E., Perera, T., and Scott, K. (2008). DING proteins; novel members of a prokaryotic phosphate-binding protein superfamily which extends into the eukaryotic kingdom. Int. J. Biochem. Cell Biol. 40, 170-175.
4. Chambery, A., Di Maro, A., Monti, M.M., Stirpe, F., and Parente, A. (2004). Volkensin from Adenia volkensii Harms (kilyambiti plant), a type 2 ribosome-inactivating protein. Eur. J. Biochem. 271, 108-117.
5. Contreras-Martel, C., Carpentier, P., Morales, R., Renault, F., Chesne-Seck, M.-L., Rochu, D., Masson, P., Fontecilla-Camps, J.C., and Chabriere, E. (2006). Crystallization and preliminary X-ray diffraction analysis of the human phosphate binding protein (HPBP). Acta Crystallogr. F62, 67-69.
6. SJ, a novel protein in St. John's wort, that suppresses expression of HIV-1 genome. Gene Ther. 13, 288-295.
7. Di Maro, A., Ferranti, P., Mastronicola, M., Polito, L., Bolognesi, A., Stirpe, F., Malorni, A., and Parente, A. (2001). Reliable sequence determination of ribosome-inactivating proteins by combining electrospray mass spectrometry and Edman degradation. J. Mass Spectrom. 36, 38-46.
8. Faraone-Mennella, M.R. and Farina, B. (1995). In the thermophilic archaeon Sulfolobus solfataricus a DNA-binding protein is in vitro (ADP-ribosyl)ated. Biochem. Biophys. Res. Commun. 208, 55-62.
9. Faraone-Mennella, M.R., Gambacorta, A., Nicolaus, B., and Farina B. (1996). Immunochemical detection of ADP-ribosylating enzymes in the archaeon Sulfolobus solfataricus. FEBS Lett. 378, 199-201.
10. Faraone-Mennella, M.R., Gambacorta, A., Nicolaus, B., and Farina B. (1998). Purification and biochemical characterization of a poly(ADP-ribose) polymerase-like enzyme from the thermophilic archaeon Sulfolobus solfataricus. Biochem. J. 335, 441-447.
11. Faraone-Mennella, M.R., Castellano, S., De Luca, P., Discenza, A., Gambacorta, A., Nicolaus, B., and Farina, B. (2000). Comparison of the ADP-ribosylating thermozyme from Sulfolobus solfataricus and the mesophilic poly(ADP-ribose) polymerases. FEMS Microbiol. Lett. 192, 9-14.
12. Faraone-Mennella, M.R., De Luca, P., Giordano, A., Gambacorta, A., Nicolaus, B., and Farina, B. (2002). High stability binding of poly(ADPribose) polymerase-like thermozyme from S. solfataricus with circular DNA. J. Cell. Biochem. 85, 158-166.
13. Hassa, P.O. and Hottiger, M.O. (2008). The diverse biological roles of mammalian PARPs, a small but powerful family of poly-ADP-ribose polymerases. Front. Biosci. 13, 3046-3082.
14. Laemmli, U.K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, 680-685.
15. Lewis, A.P. and Crowther, D. (2005). DING proteins are from Pseudomonas. FEMS Microbiol. Lett. 252, 215-222.
16. Morales, R., Berna, A., Carpentier, P., Contreras-Martel, C., Renault, F., Nicodeme, M., Chesne-Seck, M.-L., Bernier, E., Dupuy, J., Schaeffer, C., et al. (2006). Serendipitous discovery and X-ray structure of a human phosphate binding apolipoprotein. Structure 14, 601-609.
17. Pantazaki, A.A., Tsolkas, G. P., and Kyriakidis, D.A. (2008). A DING phosphatase in Thermus thermophilus. Amino Acids 34, 437-448.
18. Perera, T., Berna, A., Scott, K., Lemaitre-Guillier, C., and Bernier, F. (2008). Proteins related to St. John's Wort p27SJ, a suppressor of HIV-1 expression, are ubiquitous in plants. Phytochemistry 69, 865-872.
19. Scott, K. and Wu, L. (2005). Functional properties of a recombinant bacterial DING protein: comparison with a homologous human protein. Biochim. Biophys. Acta 1744, 234-244.
20. Stone, K.L. and Williams, K.R. (1993). Enzymatic digestion of proteins and HPLC peptide isolation. In: A Practical Guide to Protein and Peptide Purification for Microsequencing, P. Matsudaira, ed. (San Diego, CA, USA: Academic Press), pp. 59-61.
21. Stover, C.K., Pham, X.Q., Erwin, A.L., Mizoguchi, S.D.,Warrener, P., Hickey, M.J., Brinkman, F.S., Hufnagle, W.O., Kowalik, D.J., Lagrou, M., et al. (2000). Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen. Nature 406, 959-964.
22. Zhang, X.X., Scott, K., Meffin, R., and Rainey, P.B. (2007). Genetic characterization of psp encoding the DING protein in Pseudomonas fluorescens SBW25. BMC Microbiol. 7, 114.