-
1
-
-
0002860014
-
-
Belasco J.G., and Brawerman G. (Eds), Academic Press, San Diego
-
Belasco J.G. In: Belasco J.G., and Brawerman G. (Eds). Control of Messenger RNA Stability (1993), Academic Press, San Diego 3-12
-
(1993)
Control of Messenger RNA Stability
, pp. 3-12
-
-
Belasco, J.G.1
-
2
-
-
0030779484
-
Polyphosphate kinase is a component of the Escherichia coli RNA degradosome
-
Blum E., Py B., Carpousis A.J., and Higgins C.F. Polyphosphate kinase is a component of the Escherichia coli RNA degradosome. Mol. Microbiol. 26 (1997) 387-398
-
(1997)
Mol. Microbiol.
, vol.26
, pp. 387-398
-
-
Blum, E.1
Py, B.2
Carpousis, A.J.3
Higgins, C.F.4
-
3
-
-
0033548140
-
Polyadenylation promotes degradation of 3′-structured RNA by the Escherichia coli mRNA degradosome in vitro
-
Blum E., Carpousis A.J., and Higgins C.F. Polyadenylation promotes degradation of 3′-structured RNA by the Escherichia coli mRNA degradosome in vitro. J. Biol. Chem. 274 (1999) 4009-4016
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 4009-4016
-
-
Blum, E.1
Carpousis, A.J.2
Higgins, C.F.3
-
4
-
-
0344412947
-
Quaternary structure and catalytic activity of the Escherichia coli ribonuclease E amino-terminal catalytic domain
-
Callaghan A.J., Grossmann J.G., Redko Y.U., Ilag L.L., Moncrieffe M.C., Symmons M.F., Robinson C.V., McDowall K.J., and Luisi B.F. Quaternary structure and catalytic activity of the Escherichia coli ribonuclease E amino-terminal catalytic domain. Biochem. 42 (2003) 13848-13855
-
(2003)
Biochem.
, vol.42
, pp. 13848-13855
-
-
Callaghan, A.J.1
Grossmann, J.G.2
Redko, Y.U.3
Ilag, L.L.4
Moncrieffe, M.C.5
Symmons, M.F.6
Robinson, C.V.7
McDowall, K.J.8
Luisi, B.F.9
-
5
-
-
3242802943
-
Studies of the RNA degradosome-organizing domain of the Escherichia coli ribonuclease RNase E
-
Callaghan A.J., Aurikko J.P., Ilag L.L., Grossmann J.G., Chandran V., Kühnel K., Poljak L., Carpousis A.J., Robinson C.V., Symmons M.F., and Luisi B.F. Studies of the RNA degradosome-organizing domain of the Escherichia coli ribonuclease RNase E. J. Mol. Biol. 340 (2004) 965-979
-
(2004)
J. Mol. Biol.
, vol.340
, pp. 965-979
-
-
Callaghan, A.J.1
Aurikko, J.P.2
Ilag, L.L.3
Grossmann, J.G.4
Chandran, V.5
Kühnel, K.6
Poljak, L.7
Carpousis, A.J.8
Robinson, C.V.9
Symmons, M.F.10
Luisi, B.F.11
-
6
-
-
35548995356
-
The RNA degradosome of Escherichia coli: An mRNA-degrading machine assembled on RNase E
-
Carpousis A.J. The RNA degradosome of Escherichia coli: An mRNA-degrading machine assembled on RNase E. Annu. Rev. Microbiol. 61 (2007) 71-87
-
(2007)
Annu. Rev. Microbiol.
, vol.61
, pp. 71-87
-
-
Carpousis, A.J.1
-
7
-
-
0028269435
-
Copurification of E. coli RNAase E and PNPase: Evidence for a specific association between two enzymes important in RNA processing and degradation
-
Carpousis A.J., Van Houwe G., Ehretsmann C., and Krisch H.M. Copurification of E. coli RNAase E and PNPase: Evidence for a specific association between two enzymes important in RNA processing and degradation. Cell 76 (1994) 889-900
-
(1994)
Cell
, vol.76
, pp. 889-900
-
-
Carpousis, A.J.1
Van Houwe, G.2
Ehretsmann, C.3
Krisch, H.M.4
-
9
-
-
33847117737
-
Recognition and cooperation between the ATP-dependent RNA helicase RhlB and ribonuclease RNase E
-
Chandran V., Poljak L., Vanzo N.F., Leroy A., Miguel R.N., Fernandez-Recio J., Parkinson J., Burns C., Carpousis A.J., and Luisi B.F. Recognition and cooperation between the ATP-dependent RNA helicase RhlB and ribonuclease RNase E. J. Mol. Biol. 367 (2007) 113-132
-
(2007)
J. Mol. Biol.
, vol.367
, pp. 113-132
-
-
Chandran, V.1
Poljak, L.2
Vanzo, N.F.3
Leroy, A.4
Miguel, R.N.5
Fernandez-Recio, J.6
Parkinson, J.7
Burns, C.8
Carpousis, A.J.9
Luisi, B.F.10
-
10
-
-
0032569032
-
Reconstitution of the degradation of the mRNA for ribosomal protein S20 with purified enzymes
-
Coburn G.A., and Mackie G.A. Reconstitution of the degradation of the mRNA for ribosomal protein S20 with purified enzymes. J. Mol. Biol. 279 (1998) 1061-1074
-
(1998)
J. Mol. Biol.
, vol.279
, pp. 1061-1074
-
-
Coburn, G.A.1
Mackie, G.A.2
-
11
-
-
0032617132
-
Degradation of mRNA in Escherichia coli: An old problem with some new twists
-
Coburn G.A., and Mackie G.A. Degradation of mRNA in Escherichia coli: An old problem with some new twists. Prog. Nucl. Acids Res. Mol. Biol. 62 (1999) 55-108
-
(1999)
Prog. Nucl. Acids Res. Mol. Biol.
, vol.62
, pp. 55-108
-
-
Coburn, G.A.1
Mackie, G.A.2
-
12
-
-
0033214259
-
Reconstitution of a minimal RNA degradosome demonstrates functional coordination between a 3′-exonuclease and a DEAD-box RNA helicase
-
Coburn G.A., Miao X., Briant D.J., and Mackie G.A. Reconstitution of a minimal RNA degradosome demonstrates functional coordination between a 3′-exonuclease and a DEAD-box RNA helicase. Genes Dev. 13 (1999) 2594-2603
-
(1999)
Genes Dev.
, vol.13
, pp. 2594-2603
-
-
Coburn, G.A.1
Miao, X.2
Briant, D.J.3
Mackie, G.A.4
-
13
-
-
0027380985
-
RNase E activity is conferred by a single polypeptide: Overexpression, purification, and properties of the ams/rne/hmp1 gene product
-
Cormack R.S., Genereaux J.L., and Mackie G.A. RNase E activity is conferred by a single polypeptide: Overexpression, purification, and properties of the ams/rne/hmp1 gene product. Proc. Natl. Acad. Sci. USA 90 (1993) 9006-9010
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 9006-9010
-
-
Cormack, R.S.1
Genereaux, J.L.2
Mackie, G.A.3
-
14
-
-
32644435694
-
Degradation of RNA in bacteria: Comparison of mRNA and stable RNA
-
Deutscher M.P. Degradation of RNA in bacteria: Comparison of mRNA and stable RNA. Nucl. Acids Res. 34 (2006) 659-666
-
(2006)
Nucl. Acids Res.
, vol.34
, pp. 659-666
-
-
Deutscher, M.P.1
-
15
-
-
0018034154
-
Structural analysis and in vitro processing to p5 rRNA of a 9S RNA molecule isolated from an rne mutant of E. coli
-
Ghora B.K., and Apirion D. Structural analysis and in vitro processing to p5 rRNA of a 9S RNA molecule isolated from an rne mutant of E. coli. Cell 15 (1978) 1055-1066
-
(1978)
Cell
, vol.15
, pp. 1055-1066
-
-
Ghora, B.K.1
Apirion, D.2
-
16
-
-
0019258624
-
Elution of proteins from sodium dodecyl sulfate-polyacrylamide gels, removal of sodium dodecyl sulfate, and renaturation of enzymatic activity: Results with sigma subunit of Escherichia coli RNA polymerase, wheat germ DNA topoisomerase, and other enzymes
-
Hager D.A., and Burgess R.R. Elution of proteins from sodium dodecyl sulfate-polyacrylamide gels, removal of sodium dodecyl sulfate, and renaturation of enzymatic activity: Results with sigma subunit of Escherichia coli RNA polymerase, wheat germ DNA topoisomerase, and other enzymes. Anal. Biochem. 109 (1980) 76-86
-
(1980)
Anal. Biochem.
, vol.109
, pp. 76-86
-
-
Hager, D.A.1
Burgess, R.R.2
-
18
-
-
9644277144
-
The RNase E of Escherichia coli has at least two binding sites for DEAD-box RNA helicases: Functional replacement of RhlB by RhlE
-
Khemici V., Toesca I., Poljak L., Vanzo N.F., and Carpousis A.J. The RNase E of Escherichia coli has at least two binding sites for DEAD-box RNA helicases: Functional replacement of RhlB by RhlE. Mol. Microbiol. 54 (2004) 1422-1430
-
(2004)
Mol. Microbiol.
, vol.54
, pp. 1422-1430
-
-
Khemici, V.1
Toesca, I.2
Poljak, L.3
Vanzo, N.F.4
Carpousis, A.J.5
-
19
-
-
0035955548
-
Crystal structure of the Escherichia coli RNA degradosome component enolase
-
Kühnel K., and Luisi B.F. Crystal structure of the Escherichia coli RNA degradosome component enolase. J. Mol. Biol. 313 (2001) 583-592
-
(2001)
J. Mol. Biol.
, vol.313
, pp. 583-592
-
-
Kühnel, K.1
Luisi, B.F.2
-
20
-
-
0035793043
-
RNA degradosomes exist in vivo in Escherichia coli as multicomponent complexes associated with the cytoplasmic membrane via the N-terminal region of ribonuclease E
-
Liou G.-G., Jane W.-N., Cohen S.N., Lin N.-S., and Lin-Chao S. RNA degradosomes exist in vivo in Escherichia coli as multicomponent complexes associated with the cytoplasmic membrane via the N-terminal region of ribonuclease E. Proc. Natl. Acad. Sci. USA 98 (2001) 63-68
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 63-68
-
-
Liou, G.-G.1
Jane, W.-N.2
Cohen, S.N.3
Lin, N.-S.4
Lin-Chao, S.5
-
21
-
-
0037174922
-
DEAD box RhlB RNA helicase physically associates with exoribonuclease PNPase to degrade double-stranded RNA independent of the degradosome-assembling region of RNase E
-
Liou G.G., Chang H.Y., Lin C.S., and Lin-Chao S. DEAD box RhlB RNA helicase physically associates with exoribonuclease PNPase to degrade double-stranded RNA independent of the degradosome-assembling region of RNase E. J. Biol Chem. 277 (2002) 41157-41162
-
(2002)
J. Biol Chem.
, vol.277
, pp. 41157-41162
-
-
Liou, G.G.1
Chang, H.Y.2
Lin, C.S.3
Lin-Chao, S.4
-
22
-
-
0025796969
-
Specific endonucleolytic cleavage of the mRNA for ribosomal protein S20 of Escherichia coli requires the product of the ams gene in vivo and in vitro
-
Mackie G.A. Specific endonucleolytic cleavage of the mRNA for ribosomal protein S20 of Escherichia coli requires the product of the ams gene in vivo and in vitro. J. Bacteriol. 173 (1991) 2488-2497
-
(1991)
J. Bacteriol.
, vol.173
, pp. 2488-2497
-
-
Mackie, G.A.1
-
23
-
-
0031031467
-
Modulation of the activity of RNase E in vitro by RNA sequences and secondary structures 5′ to cleavage sites
-
Mackie G.A., Genereaux J.L., and Masterman S.K. Modulation of the activity of RNase E in vitro by RNA sequences and secondary structures 5′ to cleavage sites. J. Biol. Chem. 272 (1997) 609-616
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 609-616
-
-
Mackie, G.A.1
Genereaux, J.L.2
Masterman, S.K.3
-
24
-
-
0034804409
-
Preparation of Escherichia coli Rne protein and reconstitution of RNA degradosome
-
Mackie G.A., Coburn G.A., Miao X., Briant D.J., and Prud'homme-Généreux A. Preparation of Escherichia coli Rne protein and reconstitution of RNA degradosome. Method Enzymol. 342B (2001) 346-356
-
(2001)
Method Enzymol.
, vol.342 B
, pp. 346-356
-
-
Mackie, G.A.1
Coburn, G.A.2
Miao, X.3
Briant, D.J.4
Prud'homme-Généreux, A.5
-
25
-
-
0025740223
-
mRNA degradation by processive 3′ to 5′-exoribonucleases in vitro and the implications for prokaryotic mRNA decay in vivo
-
McLaren R.S., Newbury S.F., Dance G.S.C., Causton H.C., and Higgins C.F. mRNA degradation by processive 3′ to 5′-exoribonucleases in vitro and the implications for prokaryotic mRNA decay in vivo. J. Mol. Biol. 221 (1991) 81-95
-
(1991)
J. Mol. Biol.
, vol.221
, pp. 81-95
-
-
McLaren, R.S.1
Newbury, S.F.2
Dance, G.S.C.3
Causton, H.C.4
Higgins, C.F.5
-
26
-
-
0002494745
-
-
Belasco J.G., and Brawerman G. (Eds), Academic Press, San Diego
-
Melefors O., Lundberg U., and von Gabain A. In: Belasco J.G., and Brawerman G. (Eds). Control of Messenger RNA Stability (1993), Academic Press, San Diego 53-70
-
(1993)
Control of Messenger RNA Stability
, pp. 53-70
-
-
Melefors, O.1
Lundberg, U.2
von Gabain, A.3
-
27
-
-
0029976430
-
Proteins associated with RNase E in a multicomponent ribonucleolytic complex
-
Miczak A., Kaberdin V.R., Wei C.-L., and Lin-Chao S. Proteins associated with RNase E in a multicomponent ribonucleolytic complex. Proc. Nat. Acad. Sci. USA 93 (1996) 3865-3869
-
(1996)
Proc. Nat. Acad. Sci. USA
, vol.93
, pp. 3865-3869
-
-
Miczak, A.1
Kaberdin, V.R.2
Wei, C.-L.3
Lin-Chao, S.4
-
28
-
-
0018582283
-
RNase E, an RNA processing enzyme from Escherichia coli
-
Misra T.K., and Apirion D. RNase E, an RNA processing enzyme from Escherichia coli. J. Biol. Chem. 254 (1979) 11154-11159
-
(1979)
J. Biol. Chem.
, vol.254
, pp. 11154-11159
-
-
Misra, T.K.1
Apirion, D.2
-
29
-
-
24944507588
-
RNase E-based ribonucleoprotein complexes: Mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs
-
Morita T., Maki K., and Aiba H. RNase E-based ribonucleoprotein complexes: Mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs. Genes Dev. 19 (2005) 2176-2186
-
(2005)
Genes Dev.
, vol.19
, pp. 2176-2186
-
-
Morita, T.1
Maki, K.2
Aiba, H.3
-
30
-
-
33845688194
-
RNase E-based ribonucleoprotein complexes: Mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs
-
Erratum in
-
Morita T., Maki K., and Aiba H. RNase E-based ribonucleoprotein complexes: Mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs. Genes Dev 20 (2006) 3487 Erratum in
-
(2006)
Genes Dev
, vol.20
, pp. 3487
-
-
Morita, T.1
Maki, K.2
Aiba, H.3
-
31
-
-
0036571060
-
Initiation of tRNA maturation by RNase E is essential for cell viability in E. coli
-
Ow M.C., and Kushner S.R. Initiation of tRNA maturation by RNase E is essential for cell viability in E. coli. Genes Dev. 16 (2002) 1102-1115
-
(2002)
Genes Dev.
, vol.16
, pp. 1102-1115
-
-
Ow, M.C.1
Kushner, S.R.2
-
32
-
-
9644284618
-
Physical and functional interactions among RNase E, polynucleotide phosphorylase and the cold-shock protein, CsdA: Evidence for a "cold shock degradosome."
-
Prud'homme-Généreux A., Beran R.K., Iost I., Ramey C.S., Mackie G.A., and Simons R.S. Physical and functional interactions among RNase E, polynucleotide phosphorylase and the cold-shock protein, CsdA: Evidence for a "cold shock degradosome.". Mol. Microbiol. 54 (2004) 1409-1421
-
(2004)
Mol. Microbiol.
, vol.54
, pp. 1409-1421
-
-
Prud'homme-Généreux, A.1
Beran, R.K.2
Iost, I.3
Ramey, C.S.4
Mackie, G.A.5
Simons, R.S.6
-
33
-
-
0029922992
-
A DEAD-box RNA helicase in the Escherichia coli RNA degradosome
-
Py B., Higgins C.F., Krisch H.M., and Carpousis A.J. A DEAD-box RNA helicase in the Escherichia coli RNA degradosome. Nature 381 (1996) 169-172
-
(1996)
Nature
, vol.381
, pp. 169-172
-
-
Py, B.1
Higgins, C.F.2
Krisch, H.M.3
Carpousis, A.J.4
-
34
-
-
0034435974
-
A duplicated fold is the structural basis for polynucleotide phosphorylase catalytic activity, processivity, and regulation
-
Symmons M.F., Jones G.H., and Luisi B.F. A duplicated fold is the structural basis for polynucleotide phosphorylase catalytic activity, processivity, and regulation. Structure 8 (2000) 1215-1226
-
(2000)
Structure
, vol.8
, pp. 1215-1226
-
-
Symmons, M.F.1
Jones, G.H.2
Luisi, B.F.3
-
35
-
-
33846818898
-
RNase E and the other constituents of the RNA degradosome are components of the bacterial cytoskeleton
-
Taghbalout A., and Rothfield L. RNase E and the other constituents of the RNA degradosome are components of the bacterial cytoskeleton. Proc. Nat. Acad. Sci. USA 104 (2007) 1667-1672
-
(2007)
Proc. Nat. Acad. Sci. USA
, vol.104
, pp. 1667-1672
-
-
Taghbalout, A.1
Rothfield, L.2
-
36
-
-
0028234555
-
Immunoaffinity purification of the Escherichia coli rne gene product. Evidence that the rne gene encodes the processing endoribonuclease RNase E
-
Taraseviciene L., Naureckiene S., and Uhlin B.E. Immunoaffinity purification of the Escherichia coli rne gene product. Evidence that the rne gene encodes the processing endoribonuclease RNase E. J. Biol. Chem. 269 (1994) 12167-12172
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 12167-12172
-
-
Taraseviciene, L.1
Naureckiene, S.2
Uhlin, B.E.3
-
37
-
-
3543037550
-
Ribonuclease E organizes the protein interactions in the Escherichia coli RNA degradosome
-
Vanzo N.F., Li Y.S., Py B., Blum E., Higgins C.F., Raynal L.C., Krisch H.M., and Carpousis A.J. Ribonuclease E organizes the protein interactions in the Escherichia coli RNA degradosome. Genes Devel. 12 (1998) 2770-2781
-
(1998)
Genes Devel.
, vol.12
, pp. 2770-2781
-
-
Vanzo, N.F.1
Li, Y.S.2
Py, B.3
Blum, E.4
Higgins, C.F.5
Raynal, L.C.6
Krisch, H.M.7
Carpousis, A.J.8
-
38
-
-
51249099359
-
Reconstituion and analysis of the multienzyme Escherichia coli RNA degradosome
-
Worrall J.A.R., Gorna M., Crump N.T., Phillips L.G., Tuck A.C., Price A.J., Bavro V.N., and Luisi B.F. Reconstituion and analysis of the multienzyme Escherichia coli RNA degradosome. J. Mol. Biol. 382 (2008) 870-883
-
(2008)
J. Mol. Biol.
, vol.382
, pp. 870-883
-
-
Worrall, J.A.R.1
Gorna, M.2
Crump, N.T.3
Phillips, L.G.4
Tuck, A.C.5
Price, A.J.6
Bavro, V.N.7
Luisi, B.F.8
|