Modulation of the activity of RNase E in vitro by RNA sequences and secondary structures 5' to cleavage sites

Journal of Biological Chemistry

Volumn 272, Issue 1, 1997, Pages 609-616

  Mackie, George A ^a   Genereaux, Julie L ^a   Masterman, Stephanie K ^a  

^a UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; RIBONUCLEASE; RIBOSOME PROTEIN;

ARTICLE; BACTERIAL GENETICS; ENZYME ACTIVITY; ENZYME SUBSTRATE; ESCHERICHIA COLI; NONHUMAN; PRIORITY JOURNAL; PROTEIN SECONDARY STRUCTURE; RNA SEQUENCE;

BACTERIAL PROTEINS; BINDING SITES; ENDORIBONUCLEASES; ESCHERICHIA COLI; NUCLEIC ACID CONFORMATION; RIBOSOMAL PROTEINS; RNA, MESSENGER; RNA-BINDING PROTEINS; STRUCTURE-ACTIVITY RELATIONSHIP; SUBSTRATE SPECIFICITY;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 0031031467     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.272.1.609     Document Type: Article

References (34)

1. Ehretsmann, C. P., Carpousis, A. J., and Krisch, H. M. (1992) Genes Dev. 6, 149-159
2. Melefors, Ö., Lundberg, U., and von Gabain, A. (1993) in Control of Messenger RNA Stability (Belasco, J. and Brawerman, G., eds) pp. 53-70, Academic Press, New York
3. Tomcsányi, T., and Apirion, D. (1985) J. Mol. Biol. 185, 713-720
4. Mackie, G. A. (1991) J. Bacterial. 173, 2488-2497
5. McDowall, K. J., Lin-Chao, S., and Cohen, S. H. (1994) J. Biol. Chem. 269, 10790-10796
6. Lin-Chao, S., Wong, T.-T., McDowall, K. J., and Cohen, S. N. (1994) J. Biol. Chem. 269, 10797-10803
7. Cormack, R. S., and Mackie, G. A. (1992) J. Mol. Biol. 228, 1078-1090
8. Mackie, G. A. (1992) J. Biol. Chem. 267, 1054-1061
9. McDowall, K. J., Kaberdin, V. R., Wu, S.-W., Cohen, S. N., and Lin-Chao, S. (1995) Nature 374, 287-290
10. Mackie, G. A., and Genereaux, J. L. (1993) J. Mol. Biol. 234, 998-1012
11. Emory, S. A. Bouvet, P., and Belasco, J. G. (1992) Genes Dev. 6, 135-148
12. Chen, L.-H., Emory, S. A., Bricker, A. L., Bouvet, P., and Belasco, J. G. (1991) J. Bacteriol. 173, 4578-4586
13. Hansen, M. J., Chen, L.-H., Fejzo, M. L. S., and Belasco, J. L. (1994) Mol. Microbiol 12, 707-716
14. Bouvet, P., and Belasco, J. (1992) Nature 360, 488-491
15. Mead, D. A., Szczesna-Skorupa, E., and Kemper, B. (1986) Protein Eng. 1, 67-74
16. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
17. Melton, D. A., Krieg, P. A., Rebagliatti, M. R., Maniatis, T., Zinn, K., and Green, M. R. (1984) Nucleic Acids Res. 12, 7035-7056
18. Biggin, M. D., Gibson, T. J., and Hong, G. F. (1983) Proc. Natl Acad. Sci. U. S. A. 80, 3963-3965
19. Zhu, L., Gangopadhyay, T., Padmanabha, K. P., and Deutscher, M. P. (1990) J. Bacteriol. 172, 3146-3151
20. Cormack, R. S., Genereaux, J. L., and Mackie, G. A. (1993) Proc. Natl. Acad. Sci. U. S. A. 90, 9006-9010
21. Krämer, A., Keller, W., Appel, B., and Lührmann, R. (1984) Cell 38, 299-307
22. Freier, S. M., Kierzek, R., Jaeger, J. A., Sugimoto, N., Caruthers, M. H., Neilson, T., and Turner, D. H- (1986) Proc. Natl. Acad. Sci. U. S. A. 83, 9373-9377
23. Bartel, D. P., Zapp, M. L., Green, M. R., and Szostak, J. W. (1991) Cell 67, 529-536
24. Iwai, S., Pritchard, D., Mann, D. A., Kara, J., and Gait, M. J. (1992) Nucleic Acids Res. 20, 6465-6472
25. Westhof, E., Romby, P., Romaniuk, P. J., Ebel, J.-P., Ehresmann, C., and Ehresmann, B. (1989) J. Mol. Biol. 207, 417-431
26. Woese, C. R., Gutell, R., Gupta, R., and Noller, H. F. (1983) Microbiol. Rev. 47, 621-669
27. Turner, D. H. (1996) Curr. Opin. Struct. Biol. 6, 299-304
28. Carpousis, A. J., Van Houwe, G., Ehretsmann, C., and Krisch, H. (1994) Cell 76, 889-900
29. Py, B., Higgins, C. F., Krisch, H. M., and Carpousis, A. J. (1996) Nature 381, 169-172
30. Miczak, A., Kaberdin, V. R., Wei, C.-L., and Lin-Chao, S. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 3865-3869
31. Cohen, S. N. (1995) Cell 80, 829-832
32. Taraseviciene, L., Björk, G. R., and Uhlin, B. E. (1995) J. Biol. Chem. 270, 26391-26398
33. McDowall, K. J., and Cohen, S. N. (1996) J. Mol. Biol. 256, 349-355
34. Kaberdin, V. R., Chao, Y.-H., and Lin-Chao, S. (1996) J. Biol. Chem. 271, 13103-13109