-
1
-
-
24344434584
-
A phylogeny of bacterial nucleotidyltransferases: Bacillus halodurans contains two tRNA nucleotidyltransferases
-
Bralley, P., S. A. Chang, and G. H. Jones. 2005. A phylogeny of bacterial nucleotidyltransferases: Bacillus halodurans contains two tRNA nucleotidyltransferases. J. Bacteriol. 187:5927-5936.
-
(2005)
J. Bacteriol
, vol.187
, pp. 5927-5936
-
-
Bralley, P.1
Chang, S.A.2
Jones, G.H.3
-
2
-
-
33645106095
-
RNA 3′-tail synthesis in Streptomyces: In vitro and in vivo activities of RNase PH, the SCO3896 gene product and PNPase
-
Bralley, P., B. Gust, S. A. Chang, K. F. Chater, and G. H. Jones. 2006. RNA 3′-tail synthesis in Streptomyces: in vitro and in vivo activities of RNase PH, the SCO3896 gene product and PNPase. Microbiology 152:627-636.
-
(2006)
Microbiology
, vol.152
, pp. 627-636
-
-
Bralley, P.1
Gust, B.2
Chang, S.A.3
Chater, K.F.4
Jones, G.H.5
-
3
-
-
0036267108
-
cDNA cloning confirms the polyadenylation of RNA decay intermediates in Streptomyces coelicolor
-
Bralley, P., and G. H. Jones. 2002. cDNA cloning confirms the polyadenylation of RNA decay intermediates in Streptomyces coelicolor. Microbiology 148:1421-1425.
-
(2002)
Microbiology
, vol.148
, pp. 1421-1425
-
-
Bralley, P.1
Jones, G.H.2
-
4
-
-
0041923884
-
Overexpression of the polynucleotide phosphorylase gene (pnp) of Streptomyces antibioticus affects mRNA stability and poly(A) tail length but not ppGpp levels
-
Bralley, P., and G. H. Jones. 2003. Overexpression of the polynucleotide phosphorylase gene (pnp) of Streptomyces antibioticus affects mRNA stability and poly(A) tail length but not ppGpp levels. Microbiology 149:2173-2182.
-
(2003)
Microbiology
, vol.149
, pp. 2173-2182
-
-
Bralley, P.1
Jones, G.H.2
-
5
-
-
0034978592
-
Poly(A) polymerase activity and RNA polyadenylation in Streptomyces coelicolor A3(2)
-
Bralley, P., and G. H. Jones. 2001. Poly(A) polymerase activity and RNA polyadenylation in Streptomyces coelicolor A3(2). Mol. Microbiol. 40:1155-1164.
-
(2001)
Mol. Microbiol
, vol.40
, pp. 1155-1164
-
-
Bralley, P.1
Jones, G.H.2
-
6
-
-
0028050079
-
Geobacter sulfurreducens sp. nov., a hydrogen- and acetate-oxidizing dissimilatory metal-reducing microorganism
-
Caccavo, F., Jr., D. J. Lonergan, D. R. Lovley, M. Davis, J. F. Stolz, and M. J. McInerney. 1994. Geobacter sulfurreducens sp. nov., a hydrogen- and acetate-oxidizing dissimilatory metal-reducing microorganism. Appl. Environ. Microbiol. 60:3752-3759.
-
(1994)
Appl. Environ. Microbiol
, vol.60
, pp. 3752-3759
-
-
Caccavo Jr., F.1
Lonergan, D.J.2
Lovley, D.R.3
Davis, M.4
Stolz, J.F.5
McInerney, M.J.6
-
7
-
-
21844443073
-
Addition of poly(A) and heteropolymeric 3′ ends in Bacillus subtilis wild-type and polynucleotide phosphorylase-deficient strains
-
Campos-Guillén, J., P. Bralley, G. H. Jones, D. H. Bechhofer, and G. Almeda-Alvarez. 2005. Addition of poly(A) and heteropolymeric 3′ ends in Bacillus subtilis wild-type and polynucleotide phosphorylase-deficient strains. J. Bacteriol. 187:4698-4706.
-
(2005)
J. Bacteriol
, vol.187
, pp. 4698-4706
-
-
Campos-Guillén, J.1
Bralley, P.2
Jones, G.H.3
Bechhofer, D.H.4
Almeda-Alvarez, G.5
-
8
-
-
0026475908
-
Identification of the gene for an Escherichia coli poly(A) polymerase
-
Cao, G. J., and N. Sarkar. 1992. Identification of the gene for an Escherichia coli poly(A) polymerase. Proc. Natl. Acad. Sci. USA 89:10380-10384.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 10380-10384
-
-
Cao, G.J.1
Sarkar, N.2
-
9
-
-
0032916509
-
mRNA degradation: A tale of poly(A) and multiprotein machines
-
Carpousis, A. J., N. F. Vanzo, and L. C. Raynal. 1999. mRNA degradation: a tale of poly(A) and multiprotein machines. Trends Genet. 15:24-28.
-
(1999)
Trends Genet
, vol.15
, pp. 24-28
-
-
Carpousis, A.J.1
Vanzo, N.F.2
Raynal, L.C.3
-
10
-
-
37549012162
-
Kinetics of polynucleotide phosphorylase: Comparison of enzymes from Streptomyces and Escherichia coli and effects of nucleoside diphosphates
-
Chang, S. A., M. Cozad, G. A. Mackie, and G. H. Jones. 2008. Kinetics of polynucleotide phosphorylase: comparison of enzymes from Streptomyces and Escherichia coli and effects of nucleoside diphosphates. J. Bacteriol. 190:98-106.
-
(2008)
J. Bacteriol
, vol.190
, pp. 98-106
-
-
Chang, S.A.1
Cozad, M.2
Mackie, G.A.3
Jones, G.H.4
-
11
-
-
0023019585
-
Cloning, sequencing, and species relatedness of the Escherichia coli cca gene encoding the enzyme tRNA nucleotidyltransferase
-
Cudny, H., J. R. Lupski, G. N. Godson, and M. Deutscher. 1986. Cloning, sequencing, and species relatedness of the Escherichia coli cca gene encoding the enzyme tRNA nucleotidyltransferase. J. Biol. Chem. 261:6444-6449.
-
(1986)
J. Biol. Chem
, vol.261
, pp. 6444-6449
-
-
Cudny, H.1
Lupski, J.R.2
Godson, G.N.3
Deutscher, M.4
-
12
-
-
58149483673
-
-
Felsenstein, J. 1989. PHYLIP, phylogeny inference package version 3.2, Cladistics 5:164-166
-
Felsenstein, J. 1989. PHYLIP - phylogeny inference package (version 3.2). Cladistics 5:164-166.
-
-
-
-
13
-
-
0029360327
-
DNA polymerase beta belongs to an ancient nucleotidyltransferase superfamily
-
Holm, L., and C. Sander. 1995. DNA polymerase beta belongs to an ancient nucleotidyltransferase superfamily. Trends Biochem. Sci. 20:345-347.
-
(1995)
Trends Biochem. Sci
, vol.20
, pp. 345-347
-
-
Holm, L.1
Sander, C.2
-
14
-
-
0034710943
-
Polynucleotide phosphorylase functions both as a 3′-5′ exonuclease and a poly(A) polymerase in Escherichia coli
-
Mohanty, B. K., and S. R. Kushner. 2000. Polynucleotide phosphorylase functions both as a 3′-5′ exonuclease and a poly(A) polymerase in Escherichia coli. Proc. Natl. Acad. Sci. USA 97:11966-11971.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 11966-11971
-
-
Mohanty, B.K.1
Kushner, S.R.2
-
15
-
-
0028131972
-
Interaction of the 3′-end of tRNA with ribonuclease P RNA
-
Oh, B. K., and N. R. Pace. 1994. Interaction of the 3′-end of tRNA with ribonuclease P RNA. Nucleic Acids Res. 22:4087-4094.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4087-4094
-
-
Oh, B.K.1
Pace, N.R.2
-
16
-
-
0032939521
-
mRNA degradation in bacteria
-
Rauhut, R., and G. Klug. 1999. mRNA degradation in bacteria. FEMS Microbiol. Rev. 23:353-370.
-
(1999)
FEMS Microbiol. Rev
, vol.23
, pp. 353-370
-
-
Rauhut, R.1
Klug, G.2
-
17
-
-
0038182527
-
RNA polyadenylation and degradation in cyanobacteria are similar to the chloroplast but different from E. coli
-
Rott, R., G. Zipor, V. Portnoy, V. Liveanu, and G. Schuster. 2003. RNA polyadenylation and degradation in cyanobacteria are similar to the chloroplast but different from E. coli. J. Biol. Chem. 278:15771-15777.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 15771-15777
-
-
Rott, R.1
Zipor, G.2
Portnoy, V.3
Liveanu, V.4
Schuster, G.5
-
18
-
-
0029854299
-
Polyadenylation of mRNA in bacteria
-
Sarkar, N. 1996. Polyadenylation of mRNA in bacteria. Microbiology 142:3125-3133.
-
(1996)
Microbiology
, vol.142
, pp. 3125-3133
-
-
Sarkar, N.1
-
19
-
-
0031009317
-
Polyadenylation of mRNA in prokaryotes
-
Sarkar, N. 1997. Polyadenylation of mRNA in prokaryotes. Annu. Rev. Biochem. 66:173-197.
-
(1997)
Annu. Rev. Biochem
, vol.66
, pp. 173-197
-
-
Sarkar, N.1
-
20
-
-
0032487745
-
Identification of stable RNA hairpins causing band compression in transcriptional sequencing and their elimination by use of inosine triphosphate
-
Sasaki, N., M. Izawa, Y. Sugahara, T. Tanaka, M. Watahiki, K. Ozawa, E. Ohara, H. Funaki, Y. Yoneda, S. Matsuura, M. Muramatsu, Y. Okazaki, and Y. Hayashizaki. 1998. Identification of stable RNA hairpins causing band compression in transcriptional sequencing and their elimination by use of inosine triphosphate. Gene 222:17-23.
-
(1998)
Gene
, vol.222
, pp. 17-23
-
-
Sasaki, N.1
Izawa, M.2
Sugahara, Y.3
Tanaka, T.4
Watahiki, M.5
Ozawa, K.6
Ohara, E.7
Funaki, H.8
Yoneda, Y.9
Matsuura, S.10
Muramatsu, M.11
Okazaki, Y.12
Hayashizaki, Y.13
-
21
-
-
0345097567
-
The Streptomyces coelicolor polynucleotide phosphorylase homologue, and not the putative poly(A) polymerase, can polyadenylate RNA
-
Sohlberg, B., J. Huang, and S. N. Cohen. 2003. The Streptomyces coelicolor polynucleotide phosphorylase homologue, and not the putative poly(A) polymerase, can polyadenylate RNA. J. Bacteriol. 185:7273-7278.
-
(2003)
J. Bacteriol
, vol.185
, pp. 7273-7278
-
-
Sohlberg, B.1
Huang, J.2
Cohen, S.N.3
-
22
-
-
0037073727
-
Closely related CC- and A-adding enzymes collaborate to construct and repair the 3′-terminal CCA of tRNA in Synechocystsis sp. and Deinococcus radiodurans
-
Tomita, K., and A. M. Weiner. 2002. Closely related CC- and A-adding enzymes collaborate to construct and repair the 3′-terminal CCA of tRNA in Synechocystsis sp. and Deinococcus radiodurans. J. Biol. Chem. 277:48192-48198.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 48192-48198
-
-
Tomita, K.1
Weiner, A.M.2
-
23
-
-
0035834385
-
Collaboration between CC- and A-adding enzymes to build and repair the 3′-terminal CCA of tRNA in Aquifex aeolicus
-
Tomita, K., and A. M. Weiner. 2001. Collaboration between CC- and A-adding enzymes to build and repair the 3′-terminal CCA of tRNA in Aquifex aeolicus. Science 294:1334-1336.
-
(2001)
Science
, vol.294
, pp. 1334-1336
-
-
Tomita, K.1
Weiner, A.M.2
-
24
-
-
6944236106
-
tRNA maturation: RNA polymerization without a nucleic acid template
-
Weiner, A. M. 2004. tRNA maturation: RNA polymerization without a nucleic acid template. Curr. Biol. 14:R883-R885.
-
(2004)
Curr. Biol
, vol.14
-
-
Weiner, A.M.1
-
25
-
-
0034934778
-
Polynucleotide phosphorylase functions as both an exonuclease and a poly(A) polymerase in spinach chloroplasts
-
Yehudai-Resheff, S., M. Hirsh, and G. Schuster. 2001. Polynucleotide phosphorylase functions as both an exonuclease and a poly(A) polymerase in spinach chloroplasts. Mol. Cell. Biol. 21:5408-5416.
-
(2001)
Mol. Cell. Biol
, vol.21
, pp. 5408-5416
-
-
Yehudai-Resheff, S.1
Hirsh, M.2
Schuster, G.3
-
26
-
-
0034160029
-
Characterization of the E. coli poly(A) polymerase: Nucleotide specificity, RNA-binding affinities and RNA structure dependence
-
Yehudai-Resheff, S., and G. Schuster. 2000. Characterization of the E. coli poly(A) polymerase: nucleotide specificity, RNA-binding affinities and RNA structure dependence. Nucleic Acids Res. 28:1139-1144.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 1139-1144
-
-
Yehudai-Resheff, S.1
Schuster, G.2
-
27
-
-
0029903451
-
CCA-adding enzymes and poly(A) polymerases are all members of the same nucleotidyl transferase superfamily:characterization of the hyperthermophile Sulfolobus shibatae
-
Yue, D., N. Maizels, and A. M. Weiner. 1996. CCA-adding enzymes and poly(A) polymerases are all members of the same nucleotidyl transferase superfamily:characterization of the hyperthermophile Sulfolobus shibatae. RNA 2:895-908.
-
(1996)
RNA
, vol.2
, pp. 895-908
-
-
Yue, D.1
Maizels, N.2
Weiner, A.M.3
|