메뉴 건너뛰기




Volumn 6, Issue 2, 2008, Pages 167-174

SSR and SNP diversity in a barley germplasm collection

Author keywords

Barley; eSSR; gSSR; Molecular markers; SNP

Indexed keywords

HORDEUM;

EID: 58149379694     PISSN: 14792621     EISSN: 1479263X     Source Type: Journal    
DOI: 10.1017/S1479262108993187     Document Type: Article
Times cited : (10)

References (27)
  • 2
    • 0034094869 scopus 로고    scopus 로고
    • The development and use of microsatellite markers for genetic analysis and plant breeding with emphasis on bread wheat
    • Gupta PK and Varshney RK (2000) The development and use of microsatellite markers for genetic analysis and plant breeding with emphasis on bread wheat. Euphytica 113: 163-185.
    • (2000) Euphytica , vol.113 , pp. 163-185
    • Gupta, P.K.1    Varshney, R.K.2
  • 3
  • 4
    • 0036306905 scopus 로고    scopus 로고
    • Generation and comparison of EST-derived SSRs and SNPs in barley (Hordeum vulgare L.)
    • Kota R, Varshney RK, Thiel T, Dehmer KJ and Graner A (2001a) Generation and comparison of EST-derived SSRs and SNPs in barley (Hordeum vulgare L.). Hereditas 135: 145-151.
    • (2001) Hereditas , vol.135 , pp. 145-151
    • Kota, R.1    Varshney, R.K.2    Thiel, T.3    Dehmer, K.J.4    Graner, A.5
  • 5
    • 0034888019 scopus 로고    scopus 로고
    • Application of DHPLC for mapping of single nucleotide polymorphisms (SNPs) in barley (Hordeum vulgare L.)
    • Kota R, Wolf M, Michalek W and Graner A (2001b) Application of DHPLC for mapping of single nucleotide polymorphisms (SNPs) in barley (Hordeum vulgare L.). Genome 44: 523-528.
    • (2001) Genome , vol.44 , pp. 523-528
    • Kota, R.1    Wolf, M.2    Michalek, W.3    Graner, A.4
  • 6
    • 45249123230 scopus 로고    scopus 로고
    • EST-derived single nucleotide polymorphism (SNP) markers for assembling genetic and physical maps of the barley genome
    • doi: 10.1007/s10142-007-0060-9
    • Kota R, Varshney RK, Prasad M, Zhang H, Stein N and Graner A (2007) EST-derived single nucleotide polymorphism (SNP) markers for assembling genetic and physical maps of the barley genome. Functional and Integrative Genomics, doi: 10.1007/s10142-007-0060-9.
    • (2007) Functional and Integrative Genomics
    • Kota, R.1    Varshney, R.K.2    Prasad, M.3    Zhang, H.4    Stein, N.5    Graner, A.6
  • 8
    • 58149375360 scopus 로고    scopus 로고
    • Liedloff A (1999) Mantel non Parametric Test Calculator, Version 2.0. School of Natural Resource Sciences, Queensland University of Technology, Queensland, Australia
    • Liedloff A (1999) Mantel non Parametric Test Calculator, Version 2.0. School of Natural Resource Sciences, Queensland University of Technology, Queensland, Australia.
  • 9
    • 0030450464 scopus 로고    scopus 로고
    • Development of simple sequence repeat DNA markers and their integration into a barley linkage map
    • Liu ZW, Biyashev RM and Saghai Maroof MA (1996) Development of simple sequence repeat DNA markers and their integration into a barley linkage map. Theoretical and Applied Genetics 93: 869-876.
    • (1996) Theoretical and Applied Genetics , vol.93 , pp. 869-876
    • Liu, Z.W.1    Biyashev, R.M.2    Saghai Maroof, M.A.3
  • 10
    • 33645067401 scopus 로고    scopus 로고
    • Analysis of molecular diversity, population structure and linkage disequilibrium in a worldwide survey of cultivated barley germplasm (Hordeum vulgare L.)
    • Malysheva-Otto LV, Ganal MW and Röder MS (2006) Analysis of molecular diversity, population structure and linkage disequilibrium in a worldwide survey of cultivated barley germplasm (Hordeum vulgare L.). BMC Genetics 7: 6.
    • (2006) BMC Genetics , vol.7 , pp. 6
    • Malysheva-Otto, L.V.1    Ganal, M.W.2    Röder, M.S.3
  • 11
    • 0014054519 scopus 로고
    • The detection of disease clustering and a generalized regression approach
    • Mantel N (1967) The detection of disease clustering and a generalized regression approach. Cancer Research 27: 209-220.
    • (1967) Cancer Research , vol.27 , pp. 209-220
    • Mantel, N.1
  • 12
    • 34047124194 scopus 로고    scopus 로고
    • The Horn of Africa as a centre of barley diversification and a potential domestication site
    • Orabi J, Backes G, Wolday A, Yahyaoui A and Jahoor A (2007) The Horn of Africa as a centre of barley diversification and a potential domestication site. Theoretical and Applied Genetics 114: 1117-1127.
    • (2007) Theoretical and Applied Genetics , vol.114 , pp. 1117-1127
    • Orabi, J.1    Backes, G.2    Wolday, A.3    Yahyaoui, A.4    Jahoor, A.5
  • 13
    • 33746396980 scopus 로고    scopus 로고
    • Genetic relatedness and population differentiation of Himalayan hulless barley (Hordeum vulgare L.) landraces inferred with SSRs
    • Pandey M, Wagner C, Friedt W and Ordon F (2006) Genetic relatedness and population differentiation of Himalayan hulless barley (Hordeum vulgare L.) landraces inferred with SSRs. Theoretical and Applied Genetics 113: 715-729.
    • (2006) Theoretical and Applied Genetics , vol.113 , pp. 715-729
    • Pandey, M.1    Wagner, C.2    Friedt, W.3    Ordon, F.4
  • 14
    • 84919868379 scopus 로고    scopus 로고
    • Genes and genome changes during domestication of cereals
    • Gupta PK and Varshney RK eds, Dordrecht: Kluwer Academic Publishers, pp
    • Pozzi C, Rossini L, Vecchietti A and Salamini F (2004) Genes and genome changes during domestication of cereals. In: Gupta PK and Varshney RK (eds) Cereal Genomics. Dordrecht: Kluwer Academic Publishers, pp. 165-198.
    • (2004) Cereal Genomics , pp. 165-198
    • Pozzi, C.1    Rossini, L.2    Vecchietti, A.3    Salamini, F.4
  • 17
    • 58149395787 scopus 로고    scopus 로고
    • Rohlf FJ (1998) NTSYS-pc numerical taxonomy and multivariate analysis system. Version 2.02. Exeter Publications Setauket, New York
    • Rohlf FJ (1998) NTSYS-pc numerical taxonomy and multivariate analysis system. Version 2.02. Exeter Publications Setauket, New York.
  • 20
    • 2542420339 scopus 로고    scopus 로고
    • A comparison of sequence-based polymorphism and haplotype content in transcribed and anonymous regions of the barley genome
    • Russell J, Booth A, Fuller J, Harrower B, Hedley P, Machray G and Powell W (2004) A comparison of sequence-based polymorphism and haplotype content in transcribed and anonymous regions of the barley genome. Genome 47: 389-398.
    • (2004) Genome , vol.47 , pp. 389-398
    • Russell, J.1    Booth, A.2    Fuller, J.3    Harrower, B.4    Hedley, P.5    Machray, G.6    Powell, W.7
  • 21
    • 0031823220 scopus 로고    scopus 로고
    • The use of microsatellite markers for detection of genetic diversity in barley populations
    • Struss P and Plieske J (1998) The use of microsatellite markers for detection of genetic diversity in barley populations. Theoretical and Applied Genetics 97: 308-315.
    • (1998) Theoretical and Applied Genetics , vol.97 , pp. 308-315
    • Struss, P.1    Plieske, J.2
  • 22
    • 0037854629 scopus 로고    scopus 로고
    • Exploiting EST databases for the development of cDNA derived microsatellite markers in barley (Hordeum vulgare L.)
    • Thiel T, Michalek W, Varshney RK and Graner A (2003) Exploiting EST databases for the development of cDNA derived microsatellite markers in barley (Hordeum vulgare L.). Theoretical and Applied Genetics 106: 411-422.
    • (2003) Theoretical and Applied Genetics , vol.106 , pp. 411-422
    • Thiel, T.1    Michalek, W.2    Varshney, R.K.3    Graner, A.4
  • 25
    • 34047186312 scopus 로고    scopus 로고
    • Single nucleotide polymorphisms in rye (Secale cereale L.): Discovery, frequency, and applications for genome mapping and diversity studies
    • Varshney RK, Beier U, Khlestkina EK, Kota R, Korzun V, Graner A and Börner A (2007a) Single nucleotide polymorphisms in rye (Secale cereale L.): discovery, frequency, and applications for genome mapping and diversity studies. Theoretical and Applied Genetics 114: 1105-1116.
    • (2007) Theoretical and Applied Genetics , vol.114 , pp. 1105-1116
    • Varshney, R.K.1    Beier, U.2    Khlestkina, E.K.3    Kota, R.4    Korzun, V.5    Graner, A.6    Börner, A.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.