-
1
-
-
28644445396
-
Combined bromodeoxyuridine immunocapture and terminal-restriction fragment length polymorphism analysis highlights differences in the active soil bacterial metagenome due to Glomus mosseae inoculation or plant species
-
Artursson, V., R. D. Finlay, and J. K. Jansson. 2005. Combined bromodeoxyuridine immunocapture and terminal-restriction fragment length polymorphism analysis highlights differences in the active soil bacterial metagenome due to Glomus mosseae inoculation or plant species. Environ. Microbiol. 7:1952-1966.
-
(2005)
Environ. Microbiol
, vol.7
, pp. 1952-1966
-
-
Artursson, V.1
Finlay, R.D.2
Jansson, J.K.3
-
2
-
-
0037445319
-
Nested PCR detection of archaea in defined compartments of pine mycorrhizospheres developed in boreal forest humus microcosms
-
Bomberg, M., G. Jurgens, A. Saano, R. Sen, and S. Timonen. 2003. Nested PCR detection of archaea in defined compartments of pine mycorrhizospheres developed in boreal forest humus microcosms. FEMS Microbiol. Ecol. 43:163-171.
-
(2003)
FEMS Microbiol. Ecol
, vol.43
, pp. 163-171
-
-
Bomberg, M.1
Jurgens, G.2
Saano, A.3
Sen, R.4
Timonen, S.5
-
3
-
-
35148865682
-
Distribution of Cren- and Euryarchaeota in Scots pine mycorrhizospheres and boreal forest humus
-
Bomberg, M., and S. Timonen. 2007. Distribution of Cren- and Euryarchaeota in Scots pine mycorrhizospheres and boreal forest humus. Microb. Ecol. 54:406-416.
-
(2007)
Microb. Ecol
, vol.54
, pp. 406-416
-
-
Bomberg, M.1
Timonen, S.2
-
4
-
-
0031733317
-
Phylogenetic analysis of nonthermophilic members of the kingdom Crenarchaeota and their diversity and abundance in soils
-
Buckley, D. H., J. R. Graber, and T. M. Schmidt. 1998. Phylogenetic analysis of nonthermophilic members of the kingdom Crenarchaeota and their diversity and abundance in soils. Appl. Environ. Microbiol. 64:4333-4339.
-
(1998)
Appl. Environ. Microbiol
, vol.64
, pp. 4333-4339
-
-
Buckley, D.H.1
Graber, J.R.2
Schmidt, T.M.3
-
5
-
-
0034964968
-
The diversity of Archaea and Bacteria in association with the roots of Zea mays L
-
Chelius, M. K., and E. W. Triplett. 2001. The diversity of Archaea and Bacteria in association with the roots of Zea mays L. Microb. Ecol. 41:252-263.
-
(2001)
Microb. Ecol
, vol.41
, pp. 252-263
-
-
Chelius, M.K.1
Triplett, E.W.2
-
6
-
-
0026755238
-
Archaea in coastal marine environments
-
DeLong, E. F. 1992. Archaea in coastal marine environments. Proc. Natl. Acad. Sci. USA 89:5685-5689.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 5685-5689
-
-
DeLong, E.F.1
-
7
-
-
0031769609
-
Everything in moderation: Archaea as 'non-extremophiles'
-
DeLong, E. F. 1998. Everything in moderation: archaea as 'non-extremophiles'. Curr. Opin. Genet. Dev. 8:649-654.
-
(1998)
Curr. Opin. Genet. Dev
, vol.8
, pp. 649-654
-
-
DeLong, E.F.1
-
8
-
-
0040336333
-
Novel euryarchaeotal lineages detected on rice roots and in the anoxic bulk soil of flooded rice microcosms
-
Großkopf, R., S. Stubner, and W. Liesack. 1998. Novel euryarchaeotal lineages detected on rice roots and in the anoxic bulk soil of flooded rice microcosms. Appl. Environ. Microbiol. 64:4983-4989.
-
(1998)
Appl. Environ. Microbiol
, vol.64
, pp. 4983-4989
-
-
Großkopf, R.1
Stubner, S.2
Liesack, W.3
-
9
-
-
0029669072
-
Effect of season and four tree species on soluble carbon content in fresh and decomposing litter of temperate forests
-
Harris, M. M., and L. O. Safford. 1996. Effect of season and four tree species on soluble carbon content in fresh and decomposing litter of temperate forests. Soil Sci. 161:130-135.
-
(1996)
Soil Sci
, vol.161
, pp. 130-135
-
-
Harris, M.M.1
Safford, L.O.2
-
10
-
-
0032784378
-
Diversity of soil Archaea in boreal forest before, and after clear-cutting and prescribed burning
-
Jurgens, G., and A. Saano. 1999. Diversity of soil Archaea in boreal forest before, and after clear-cutting and prescribed burning. FEMS Microbiol. Ecol. 29:205-213.
-
(1999)
FEMS Microbiol. Ecol
, vol.29
, pp. 205-213
-
-
Jurgens, G.1
Saano, A.2
-
11
-
-
0033771975
-
Identification of novel Archaea in bacterioplankton of a boreal forest lake by phylogenetic analysis and fluorescent in situ hybridization
-
Jurgens, G., F. Glöckner, R. Amann, A. Saano, L. Montonen, M. Likolammi, and U. Münster. 2000. Identification of novel Archaea in bacterioplankton of a boreal forest lake by phylogenetic analysis and fluorescent in situ hybridization. FEMS Microbiol. Ecol. 34:45-56.
-
(2000)
FEMS Microbiol. Ecol
, vol.34
, pp. 45-56
-
-
Jurgens, G.1
Glöckner, F.2
Amann, R.3
Saano, A.4
Montonen, L.5
Likolammi, M.6
Münster, U.7
-
12
-
-
0030894624
-
Novel group within the kingdom Crenarchaeota from boreal forest soil
-
Jurgens, G., K. Lindström, and A. Saano. 1997. Novel group within the kingdom Crenarchaeota from boreal forest soil. Appl. Environ. Microbiol. 63:803-805.
-
(1997)
Appl. Environ. Microbiol
, vol.63
, pp. 803-805
-
-
Jurgens, G.1
Lindström, K.2
Saano, A.3
-
13
-
-
34249106390
-
High abundance of Crenarchaeota in a temperate acidic forest soil
-
Kemnitz, D., S. Kolb, and R. Conrad. 2007. High abundance of Crenarchaeota in a temperate acidic forest soil. FEMS Microbiol. Ecol. 60:442-448.
-
(2007)
FEMS Microbiol. Ecol
, vol.60
, pp. 442-448
-
-
Kemnitz, D.1
Kolb, S.2
Conrad, R.3
-
14
-
-
25644435673
-
Isolation of an autotrophic ammonia-oxidizing marine archaeon
-
Könneke, M., A. E. Bernhard, J. R. de la Torre, C. B. Walker, J. B. Waterbury, and D. A. Stahl. 2005. Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature 437:543-546.
-
(2005)
Nature
, vol.437
, pp. 543-546
-
-
Könneke, M.1
Bernhard, A.E.2
de la Torre, J.R.3
Walker, C.B.4
Waterbury, J.B.5
Stahl, D.A.6
-
15
-
-
33748954703
-
Bacterial community composition and activity in rhizospheres of roots colonised by arbuscular mycorrhizal fungi
-
K. G. Mukerji, C. Manoharachary, and J. Singh ed, Springer-Verlag, Berlin, Germany
-
Marschner, P., and S. Timonen. 2005. Bacterial community composition and activity in rhizospheres of roots colonised by arbuscular mycorrhizal fungi, p. 139-149. In K. G. Mukerji, C. Manoharachary, and J. Singh (ed.), Microbial activity in the rhizosphere. Springer-Verlag, Berlin, Germany.
-
(2005)
Microbial activity in the rhizosphere
, pp. 139-149
-
-
Marschner, P.1
Timonen, S.2
-
17
-
-
33947221558
-
Afforestation of moorland leads to changes in crenarchaeal community structure
-
Nicol, G. W., C. D. Campbell, S. J. Chapman, and J. I. Prosser. 2007. Afforestation of moorland leads to changes in crenarchaeal community structure. FEMS Microbiol. Ecol. 60:51-59.
-
(2007)
FEMS Microbiol. Ecol
, vol.60
, pp. 51-59
-
-
Nicol, G.W.1
Campbell, C.D.2
Chapman, S.J.3
Prosser, J.I.4
-
18
-
-
2142858733
-
Spatial analysis of archaeal community structure in grassland soil
-
Nicol, G. W., L. A. Glover, and J. I. Prosser. 2003. Spatial analysis of archaeal community structure in grassland soil. Appl. Environ. Microbiol. 69:7420-7429.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 7420-7429
-
-
Nicol, G.W.1
Glover, L.A.2
Prosser, J.I.3
-
19
-
-
33745792553
-
Crenarchaeal community assembly and microdiversity in developing soils at two sites associated with deglaciation
-
Nicol, G. W., D. Tscherko, L. Chang, U. Hammesfahr, and J. I. Prosser. 2006. Crenarchaeal community assembly and microdiversity in developing soils at two sites associated with deglaciation. Environ. Microbiol. 8:1382-1393.
-
(2006)
Environ. Microbiol
, vol.8
, pp. 1382-1393
-
-
Nicol, G.W.1
Tscherko, D.2
Chang, L.3
Hammesfahr, U.4
Prosser, J.I.5
-
20
-
-
14344252220
-
Primary succession of soil Crenarchaeota across a receding glacier foreland
-
Nicol, G. W., D. Tscherko, T. M. Embley, and J. I. Prosser. 2005. Primary succession of soil Crenarchaeota across a receding glacier foreland. Environ. Microbiol. 7:337-347.
-
(2005)
Environ. Microbiol
, vol.7
, pp. 337-347
-
-
Nicol, G.W.1
Tscherko, D.2
Embley, T.M.3
Prosser, J.I.4
-
21
-
-
0042853314
-
Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16S RNA surveys and real time PCR
-
Ochsenreiter, T., D. Selezi, A. Quaiser, L. Bonch-Osmolovskaya, and C. Schleper. 2003. Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16S RNA surveys and real time PCR. Environ. Microbiol. 5:787-797.
-
(2003)
Environ. Microbiol
, vol.5
, pp. 787-797
-
-
Ochsenreiter, T.1
Selezi, D.2
Quaiser, A.3
Bonch-Osmolovskaya, L.4
Schleper, C.5
-
22
-
-
33845402281
-
Biogeography and landscape-scale diversity of the dominant Crenarchaeota of soil
-
Oline, D. K., S. K. Schmidt, and M. C. Grant. 2006. Biogeography and landscape-scale diversity of the dominant Crenarchaeota of soil. Microb. Ecol. 52:480-490.
-
(2006)
Microb. Ecol
, vol.52
, pp. 480-490
-
-
Oline, D.K.1
Schmidt, S.K.2
Grant, M.C.3
-
23
-
-
0034105806
-
Succession of microbial communities during hot composting as detected by PCR-single-strand-conformation polymorphism-based genetic profiles of small-subunit rRNA genes
-
Peters, S., S. Koschinsky, F. Schwieger, and C. C. Tebbe. 2000. Succession of microbial communities during hot composting as detected by PCR-single-strand-conformation polymorphism-based genetic profiles of small-subunit rRNA genes. Appl. Environ. Microbiol. 66:930-936.
-
(2000)
Appl. Environ. Microbiol
, vol.66
, pp. 930-936
-
-
Peters, S.1
Koschinsky, S.2
Schwieger, F.3
Tebbe, C.C.4
-
24
-
-
58149376031
-
-
Prescott, C. E., L. L. Blevins, and C. Staley. 2004. Litter decomposition in British Columbia forests: controlling factors and influences of forestry activities. BC J. Ecosyst. Manage. 5:44-57.
-
Prescott, C. E., L. L. Blevins, and C. Staley. 2004. Litter decomposition in British Columbia forests: controlling factors and influences of forestry activities. BC J. Ecosyst. Manage. 5:44-57.
-
-
-
-
25
-
-
15844365305
-
A psychrophilic crenarchaeon inhabits a marine sponge: Cenarchaeum symbiosum gen. nov., sp
-
Natl. Acad. Sci. USA
-
Preston, C. M., K. Y. Wu, T. F. Molinski, and E. F. DeLong. 1996. A psychrophilic crenarchaeon inhabits a marine sponge: Cenarchaeum symbiosum gen. nov., sp. nov. Proc. Natl. Acad. Sci. USA 93:6241-6246.
-
(1996)
nov. Proc
, vol.93
, pp. 6241-6246
-
-
Preston, C.M.1
Wu, K.Y.2
Molinski, T.F.3
DeLong, E.F.4
-
26
-
-
85047676746
-
Microbial biomass and activity in soil and litter under Pinus sylvestris, Picea abies and Betula pendula at originally similar field afforestation sites
-
Priha, O., and A. Smolander. 1997. Microbial biomass and activity in soil and litter under Pinus sylvestris, Picea abies and Betula pendula at originally similar field afforestation sites. Biol. Fertil. Soils 24:45-54.
-
(1997)
Biol. Fertil. Soils
, vol.24
, pp. 45-54
-
-
Priha, O.1
Smolander, A.2
-
27
-
-
84982546614
-
Observations on the mycorrhizal status of some alpine plant communities
-
Read, D. J., and K. H. Wandter. 1980. Observations on the mycorrhizal status of some alpine plant communities. New Phytol. 88:341-352.
-
(1980)
New Phytol
, vol.88
, pp. 341-352
-
-
Read, D.J.1
Wandter, K.H.2
-
28
-
-
32144451691
-
Performance and microbial communities of a continuous stirred tank anaerobic reactor treating two-phases olive mill solid wastes at low organic loading rates
-
Rincon, B., F. Raposo, R. Borja, J. M. Gonzalez, M. C. Portillo, and C. Saiz-Jimenez. 2006. Performance and microbial communities of a continuous stirred tank anaerobic reactor treating two-phases olive mill solid wastes at low organic loading rates. J. Biotechnol. 121:534-543.
-
(2006)
J. Biotechnol
, vol.121
, pp. 534-543
-
-
Rincon, B.1
Raposo, F.2
Borja, R.3
Gonzalez, J.M.4
Portillo, M.C.5
Saiz-Jimenez, C.6
-
30
-
-
0032792809
-
Abundance and diversity of Archaea in heavy-metal-contaminated soils
-
Sandaa, R. A., O. Enger, and V. Torsvik. 1999. Abundance and diversity of Archaea in heavy-metal-contaminated soils. Appl. Environ. Microbiol. 65:3293-3297.
-
(1999)
Appl. Environ. Microbiol
, vol.65
, pp. 3293-3297
-
-
Sandaa, R.A.1
Enger, O.2
Torsvik, V.3
-
32
-
-
23744458464
-
Cultivation of mesophilic soil crenarchaeotes in enrichment cultures from plant roots
-
Simon, H. M., C. E. Jahn, L. T. Bergerud, M. K. Sliwinski, P. J. Weimer, D. K. Willis, and R. M. Goodman. 2005. Cultivation of mesophilic soil crenarchaeotes in enrichment cultures from plant roots. Appl. Environ. Microbiol. 71:4751-4760.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 4751-4760
-
-
Simon, H.M.1
Jahn, C.E.2
Bergerud, L.T.3
Sliwinski, M.K.4
Weimer, P.J.5
Willis, D.K.6
Goodman, R.M.7
-
33
-
-
38049158156
-
Relationship between assemblages of mycorrhizal fungi and bacteria on grass roots
-
Singh, B. K., N. Nunan, K. P. Ridgway, J. McNicol, J. P. W. Young, T. J. Daniell, J. I. Prosser, and P. Millard. 2008. Relationship between assemblages of mycorrhizal fungi and bacteria on grass roots. Environ. Microbiol. 10:534-541.
-
(2008)
Environ. Microbiol
, vol.10
, pp. 534-541
-
-
Singh, B.K.1
Nunan, N.2
Ridgway, K.P.3
McNicol, J.4
Young, J.P.W.5
Daniell, T.J.6
Prosser, J.I.7
Millard, P.8
-
34
-
-
1642267395
-
Comparison of crenarchaeal consortia inhabiting the rhizosphere of diverse terrestrial plants with those in bulk soil in native environments
-
Sliwinski, M. K., and R. M. Goodman. 2004. Comparison of crenarchaeal consortia inhabiting the rhizosphere of diverse terrestrial plants with those in bulk soil in native environments. Appl. Environ. Microbiol. 70:1821-1826.
-
(2004)
Appl. Environ. Microbiol
, vol.70
, pp. 1821-1826
-
-
Sliwinski, M.K.1
Goodman, R.M.2
-
35
-
-
0003341851
-
Development and application of nucleic acid probes in bacterial systematics
-
E. Stackebrandt and M. Goodfellow ed, 1st ed. John Wiley & Sons, Ltd, Chichester, United Kingdom
-
Stahl, D. A., and R. Amann. 1991. Development and application of nucleic acid probes in bacterial systematics. p. 205-248. In E. Stackebrandt and M. Goodfellow (ed.), Nucleic acid techniques in bacterial systematics, 1st ed. John Wiley & Sons, Ltd., Chichester, United Kingdom.
-
(1991)
Nucleic acid techniques in bacterial systematics
, pp. 205-248
-
-
Stahl, D.A.1
Amann, R.2
-
36
-
-
0002423606
-
Identification of cytosceletal components in pine ectomycorrhizas
-
Timonen, S., R. D. Finlay, B. Söderström, and M. Raudaskoski. 1993. Identification of cytosceletal components in pine ectomycorrhizas. New Phytol. 124:83-92.
-
(1993)
New Phytol
, vol.124
, pp. 83-92
-
-
Timonen, S.1
Finlay, R.D.2
Söderström, B.3
Raudaskoski, M.4
-
37
-
-
0031866080
-
Bacterial community structure at defined locations of Pinus sylvestris Suillus bovinus and Pinus sylvestris Paxillus involutus mycorrhizospheres in dry pine forest humus and nursery peat
-
Timonen, S., K. S. Jørgensen, K. Haahtela, and R. Sen. 1998. Bacterial community structure at defined locations of Pinus sylvestris Suillus bovinus and Pinus sylvestris Paxillus involutus mycorrhizospheres in dry pine forest humus and nursery peat. Can. J. Microbiol. 44:499-513.
-
(1998)
Can. J. Microbiol
, vol.44
, pp. 499-513
-
-
Timonen, S.1
Jørgensen, K.S.2
Haahtela, K.3
Sen, R.4
-
38
-
-
0034861052
-
Estimation of the biomass and seasonal growth of external mycelium of ectomycorrhizal fungi in the field
-
Wallander, H., L. O. Nilsson, D. Hagerberg, and E. Bååth. 2001. Estimation of the biomass and seasonal growth of external mycelium of ectomycorrhizal fungi in the field. New Phytol. 151:753-760.
-
(2001)
New Phytol
, vol.151
, pp. 753-760
-
-
Wallander, H.1
Nilsson, L.O.2
Hagerberg, D.3
Bååth, E.4
-
39
-
-
0026067797
-
16S ribosomal DNA amplification for phylogenetic study
-
Weisburg, W. G., S. M. Barns, D. A. Pelletier, and D. J. Lane. 1991. 16S ribosomal DNA amplification for phylogenetic study. J. Bacteriol. 173:697-703.
-
(1991)
J. Bacteriol
, vol.173
, pp. 697-703
-
-
Weisburg, W.G.1
Barns, S.M.2
Pelletier, D.A.3
Lane, D.J.4
-
40
-
-
0842267508
-
Wood ash fertilization alters the forest humus Archaea community
-
Yrjälä, K., R. Katainen, G. Jurgens, U. Saarela, A. Saano, M. Romantchuk, and H. Fritze. 2004. Wood ash fertilization alters the forest humus Archaea community. Soil Biol. Biochem. 36:199-201.
-
(2004)
Soil Biol. Biochem
, vol.36
, pp. 199-201
-
-
Yrjälä, K.1
Katainen, R.2
Jurgens, G.3
Saarela, U.4
Saano, A.5
Romantchuk, M.6
Fritze, H.7
|