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Volumn 291, Issue 1, 2009, Pages 50-58

Cold-induced gene expression profiles of Vibrio parahaemolyticus: a time-course analysis: RESEARCH LETTER

Author keywords

Cold shock; CspA; Expression profiling; Microarray; Time course; Vibrio parahaemolyticus

Indexed keywords

COLD SHOCK PROTEIN; MESSENGER RNA;

EID: 58149299629     PISSN: 03781097     EISSN: 15746968     Source Type: Journal    
DOI: 10.1111/j.1574-6968.2008.01434.x     Document Type: Article
Times cited : (37)

References (36)
  • 1
    • 35448958030 scopus 로고    scopus 로고
    • Microarray-based characterization of the Listeria monocytogenes cold regulon in log- and stationary-phase cells
    • Chan YC, Raengpradub S, Boor KJ Wiedmann M (2007) Microarray-based characterization of the Listeria monocytogenes cold regulon in log- and stationary-phase cells. Appl Environ Microbiol 73 : 6484 6498.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 6484-6498
    • Chan, Y.C.1    Raengpradub, S.2    Boor, K.J.3    Wiedmann, M.4
  • 3
    • 0014432516 scopus 로고
    • Limited capacity for protein synthesis at zero degrees centigrade in Escherichia coli
    • Das HK Goldstein A (1968) Limited capacity for protein synthesis at zero degrees centigrade in Escherichia coli. J Mol Biol 31 : 209 226.
    • (1968) J Mol Biol , vol.31 , pp. 209-226
    • Das, H.K.1    Goldstein, A.2
  • 4
    • 0242489330 scopus 로고    scopus 로고
    • Cold shock response and major cold shock proteins of Vibrio cholerae
    • Datta PP Bhadra RK (2003) Cold shock response and major cold shock proteins of Vibrio cholerae. Appl Environ Microb 69 : 6361 6369.
    • (2003) Appl Environ Microb , vol.69 , pp. 6361-6369
    • Datta, P.P.1    Bhadra, R.K.2
  • 5
    • 0038105399 scopus 로고    scopus 로고
    • Enzyme-linked immunosorbent assay to differentiate the antibody responses of animals infected with Brucella species from those of animals infected with Yersinia enterocolitica O9
    • Erdenebaatar J, Bayarsaikhan B, Watarai M, Makino S Shirahata T (2003) Enzyme-linked immunosorbent assay to differentiate the antibody responses of animals infected with Brucella species from those of animals infected with Yersinia enterocolitica O9. Clin Diagn Lab Immunol 10 : 710 714.
    • (2003) Clin Diagn Lab Immunol , vol.10 , pp. 710-714
    • Erdenebaatar, J.1    Bayarsaikhan, B.2    Watarai, M.3    Makino, S.4    Shirahata, T.5
  • 6
    • 33646344978 scopus 로고    scopus 로고
    • STEM: a tool for the analysis of short time series gene expression data
    • Ernst J Bar-Joseph Z (2006) STEM: a tool for the analysis of short time series gene expression data. BMC Bioinformatics 7 : 191.
    • (2006) BMC Bioinformatics , vol.7 , pp. 191
    • Ernst, J.1    Bar-Joseph, Z.2
  • 7
    • 0031974010 scopus 로고    scopus 로고
    • Role of the cold-box region in the 5′ untranslated region of the cspA mRNA in its transient expression at low temperature in Escherichia coli
    • Fang L, Hou Y Inouye M (1998) Role of the cold-box region in the 5′ untranslated region of the cspA mRNA in its transient expression at low temperature in Escherichia coli. J Bacteriol 180 : 90 95.
    • (1998) J Bacteriol , vol.180 , pp. 90-95
    • Fang, L.1    Hou, Y.2    Inouye, M.3
  • 8
    • 33745005291 scopus 로고    scopus 로고
    • Global transcriptome analysis of the cold shock response of Shewanella oneidensis MR-1 and mutational analysis of its classical cold shock proteins
    • Gao H, Yang ZK, Wu L, Thompson DK Zhou J (2006) Global transcriptome analysis of the cold shock response of Shewanella oneidensis MR-1 and mutational analysis of its classical cold shock proteins. J Bacteriol 188 : 4560 4569.
    • (2006) J Bacteriol , vol.188 , pp. 4560-4569
    • Gao, H.1    Yang, Z.K.2    Wu, L.3    Thompson, D.K.4    Zhou, J.5
  • 9
    • 0036488842 scopus 로고    scopus 로고
    • Virulence and the heat shock response
    • Gophna U Ron EZ (2003) Virulence and the heat shock response. Int J Med Microbiol 292 : 453 461.
    • (2003) Int J Med Microbiol , vol.292 , pp. 453-461
    • Gophna, U.1    Ron, E.Z.2
  • 10
    • 0043166304 scopus 로고    scopus 로고
    • Transcriptional and post-transcriptional control of cold-shock genes
    • Gualerzi CO, Giuliodori AM Pon CL (2003) Transcriptional and post-transcriptional control of cold-shock genes. J Mol Biol 331 : 527 539.
    • (2003) J Mol Biol , vol.331 , pp. 527-539
    • Gualerzi, C.O.1    Giuliodori, A.M.2    Pon, C.L.3
  • 11
    • 20944439397 scopus 로고    scopus 로고
    • DNA microarray analysis of the heat- and cold-shock stimulons in Yersinia pestis
    • Han Y, Zhou D, Pang X et al 2005) DNA microarray analysis of the heat- and cold-shock stimulons in Yersinia pestis. Microbes Infect 7 : 335 348.
    • (2005) Microbes Infect , vol.7 , pp. 335-348
    • Han, Y.1    Zhou, D.2    Pang, X.3
  • 13
    • 0036549167 scopus 로고    scopus 로고
    • HtpG plays a role in cold acclimation in cyanobacteria
    • Hossain MM Nakamoto H (2002) HtpG plays a role in cold acclimation in cyanobacteria. Curr Microbiol 44 : 291 296.
    • (2002) Curr Microbiol , vol.44 , pp. 291-296
    • Hossain, M.M.1    Nakamoto, H.2
  • 14
    • 0030043216 scopus 로고    scopus 로고
    • Cold shock induces a major ribosomal-associated protein that unwinds double-stranded RNA in Escherichia coli
    • Jones PG, Mitta M, Kim Y, Jiang W Inouye M (1996) Cold shock induces a major ribosomal-associated protein that unwinds double-stranded RNA in Escherichia coli. P Natl Acad Sci USA 93 : 76 80.
    • (1996) P Natl Acad Sci USA , vol.93 , pp. 76-80
    • Jones, P.G.1    Mitta, M.2    Kim, Y.3    Jiang, W.4    Inouye, M.5
  • 17
    • 1642361660 scopus 로고    scopus 로고
    • The ClpB/Hsp104 molecular chaperone - a protein disaggregating machine
    • Lee S, Sowa ME, Choi JM Tsai FT (2004) The ClpB/Hsp104 molecular chaperone - a protein disaggregating machine. J Struct Biol 146 : 99 105.
    • (2004) J Struct Biol , vol.146 , pp. 99-105
    • Lee, S.1    Sowa, M.E.2    Choi, J.M.3    Tsai, F.T.4
  • 18
    • 17344390490 scopus 로고    scopus 로고
    • Pandemic spread of an O3:K6 clone of Vibrio parahaemolyticus and emergence of related strains evidenced by arbitrarily primed PCR and toxRS sequence analyses
    • Matsumoto C, Okuda J, Ishibashi M et al 2000) Pandemic spread of an O3:K6 clone of Vibrio parahaemolyticus and emergence of related strains evidenced by arbitrarily primed PCR and toxRS sequence analyses. J Clin Microbiol 38 : 578 585.
    • (2000) J Clin Microbiol , vol.38 , pp. 578-585
    • Matsumoto, C.1    Okuda, J.2    Ishibashi, M.3
  • 20
    • 0029065574 scopus 로고
    • Thermostable direct hemolysin gene of Vibrio parahaemolyticus: a virulence gene acquired by a marine bacterium
    • Nishibuchi M Kaper JB (1995) Thermostable direct hemolysin gene of Vibrio parahaemolyticus: a virulence gene acquired by a marine bacterium. Infect Immun 63 : 2093 2099.
    • (1995) Infect Immun , vol.63 , pp. 2093-2099
    • Nishibuchi, M.1    Kaper, J.B.2
  • 21
    • 0024421011 scopus 로고
    • Detection with synthetic oligonucleotide probes of nucleotide sequence variations in the genes encoding enterotoxins of Escherichia coli
    • Nishibuchi M, Murakami A, Arita M, Jikuya H, Takano J, Honda T Miwatani T (1989) Detection with synthetic oligonucleotide probes of nucleotide sequence variations in the genes encoding enterotoxins of Escherichia coli. J Clin Microbiol 27 : 2272 2276.
    • (1989) J Clin Microbiol , vol.27 , pp. 2272-2276
    • Nishibuchi, M.1    Murakami, A.2    Arita, M.3    Jikuya, H.4    Takano, J.5    Honda, T.6    Miwatani, T.7
  • 22
    • 7044239478 scopus 로고    scopus 로고
    • PCR-based identification of pandemic group Vibrio parahaemolyticus with a novel group-specific primer pair
    • Okura M, Osawa R, Iguchi A, Takagi M, Arakawa E, Terajima J Watanabe H (2004) PCR-based identification of pandemic group Vibrio parahaemolyticus with a novel group-specific primer pair. Microbiol Immunol 48 : 787 790.
    • (2004) Microbiol Immunol , vol.48 , pp. 787-790
    • Okura, M.1    Osawa, R.2    Iguchi, A.3    Takagi, M.4    Arakawa, E.5    Terajima, J.6    Watanabe, H.7
  • 23
    • 1942467448 scopus 로고    scopus 로고
    • Recent developments in bacterial cold-shock response
    • Phadtare S (2004) Recent developments in bacterial cold-shock response. Curr Issues Mol Biol 6 : 125 136.
    • (2004) Curr Issues Mol Biol , vol.6 , pp. 125-136
    • Phadtare, S.1
  • 24
    • 4944221553 scopus 로고    scopus 로고
    • Genome-wide transcriptional analysis of the cold shock response in wild-type and cold-sensitive, quadruple-csp-deletion strains of Escherichia coli
    • Phadtare S Inouye M (2004) Genome-wide transcriptional analysis of the cold shock response in wild-type and cold-sensitive, quadruple-csp-deletion strains of Escherichia coli. J Bacteriol 186 : 7007 7014.
    • (2004) J Bacteriol , vol.186 , pp. 7007-7014
    • Phadtare, S.1    Inouye, M.2
  • 26
    • 0030840922 scopus 로고    scopus 로고
    • Induction of the heat shock protein ClpB affects cold acclimation in the cyanobacterium Synechococcus sp. strain PCC 7942
    • Porankiewicz J Clarke AK (1997) Induction of the heat shock protein ClpB affects cold acclimation in the cyanobacterium Synechococcus sp. strain PCC 7942. J Bacteriol 179 : 5111 5117.
    • (1997) J Bacteriol , vol.179 , pp. 5111-5117
    • Porankiewicz, J.1    Clarke, A.K.2
  • 27
    • 0028019551 scopus 로고
    • Characterization of a glucose transport system in Vibrio parahaemolyticus
    • Sarker RI, Ogawa W, Tsuda M, Tanaka S Tsuchiya T (1994) Characterization of a glucose transport system in Vibrio parahaemolyticus. J Bacteriol 176 : 7378 7382.
    • (1994) J Bacteriol , vol.176 , pp. 7378-7382
    • Sarker, R.I.1    Ogawa, W.2    Tsuda, M.3    Tanaka, S.4    Tsuchiya, T.5
  • 28
    • 0031873712 scopus 로고    scopus 로고
    • Regulation of heat-shock response in bacteria
    • Segal G Ron EZ (1998) Regulation of heat-shock response in bacteria. Ann NY Acad Sci 851 : 147 151.
    • (1998) Ann NY Acad Sci , vol.851 , pp. 147-151
    • Segal, G.1    Ron, E.Z.2
  • 29
    • 34047115739 scopus 로고    scopus 로고
    • Vibrio parahaemolyticus: a concern of seafood safety
    • Su YC Liu C (2007) Vibrio parahaemolyticus: a concern of seafood safety. Food Microbiol 24 : 549 558.
    • (2007) Food Microbiol , vol.24 , pp. 549-558
    • Su, Y.C.1    Liu, C.2
  • 30
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • Tusher VG, Tibshirani R Chu G (2001) Significance analysis of microarrays applied to the ionizing radiation response. P Natl Acad Sci USA 98 : 5116 5121.
    • (2001) P Natl Acad Sci USA , vol.98 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3
  • 31
    • 0041909570 scopus 로고    scopus 로고
    • Bacterial cold shock responses
    • Weber MH Marahiel MA (2003) Bacterial cold shock responses. Sci Prog 86 : 9 75.
    • (2003) Sci Prog , vol.86 , pp. 9-75
    • Weber, M.H.1    Marahiel, M.A.2
  • 32
    • 0037155253 scopus 로고    scopus 로고
    • The Cold Box stem-loop proximal to the 5′-end of the Escherichia coli cspA gene stabilizes its mRNA at low temperature
    • Xia B, Ke H, Jiang W Inouye M (2002) The Cold Box stem-loop proximal to the 5′-end of the Escherichia coli cspA gene stabilizes its mRNA at low temperature. J Biol Chem 277 : 6005 6011.
    • (2002) J Biol Chem , vol.277 , pp. 6005-6011
    • Xia, B.1    Ke, H.2    Jiang, W.3    Inouye, M.4
  • 33
    • 0033222326 scopus 로고    scopus 로고
    • Cold shock response in Escherichia coli
    • Yamanaka K (1999) Cold shock response in Escherichia coli. J Mol Microbiol Biotechnol 1 : 193 202.
    • (1999) J Mol Microbiol Biotechnol , vol.1 , pp. 193-202
    • Yamanaka, K.1
  • 34
    • 22844447191 scopus 로고    scopus 로고
    • Epidemiology, pathogenesis, and prevention of foodborne Vibrio parahaemolyticus infections
    • Yeung PS Boor KJ (2004) Epidemiology, pathogenesis, and prevention of foodborne Vibrio parahaemolyticus infections. Foodborne Pathog Dis 1 : 74 88.
    • (2004) Foodborne Pathog Dis , vol.1 , pp. 74-88
    • Yeung, P.S.1    Boor, K.J.2
  • 35
    • 0027385183 scopus 로고
    • Regulation of the heat-shock response in bacteria
    • Yura T, Nagai H Mori H (1993) Regulation of the heat-shock response in bacteria. Annu Rev Microbiol 47 : 321 350.
    • (1993) Annu Rev Microbiol , vol.47 , pp. 321-350
    • Yura, T.1    Nagai, H.2    Mori, H.3
  • 36
    • 55849089933 scopus 로고    scopus 로고
    • The cyclic AMP receptor protein, CRP, is required for both virulence and expression of the minimal CRP regulon in Yersinia pestis biovar microtus
    • Zhan L, Han Y, Yang L et al 2008) The cyclic AMP receptor protein, CRP, is required for both virulence and expression of the minimal CRP regulon in Yersinia pestis biovar microtus. Infect Immun 76 : 5028 5037.
    • (2008) Infect Immun , vol.76 , pp. 5028-5037
    • Zhan, L.1    Han, Y.2    Yang, L.3


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