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Volumn 45, Issue , 2008, Pages 211-222

Standards and ontologies in computational systems biology

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; BIOLOGY; COMPUTER LANGUAGE; REVIEW; STANDARD; SYSTEMS BIOLOGY;

EID: 58149240299     PISSN: 00711365     EISSN: None     Source Type: Journal    
DOI: 10.1042/BSE0450211     Document Type: Article
Times cited : (24)

References (25)
  • 1
    • 0027370376 scopus 로고
    • Gepasi: A software package for modelling the dynamics, steady states and control of biochemical and other systems
    • Mendes, P. (1993) Gepasi: a software package for modelling the dynamics, steady states and control of biochemical and other systems. Comp. Appl. Biosci. 9, 563-571
    • (1993) Comp. Appl. Biosci , vol.9 , pp. 563-571
    • Mendes, P.1
  • 2
    • 0002823609 scopus 로고
    • Scamp: A metabolic simulator and control analysis program
    • Sauro, H.M. & Fell, D.A. (1991) Scamp: a metabolic simulator and control analysis program. Math. Comp. Modelling 15, 15-28
    • (1991) Math. Comp. Modelling , vol.15 , pp. 15-28
    • Sauro, H.M.1    Fell, D.A.2
  • 6
    • 0002203999 scopus 로고    scopus 로고
    • Jarnac: A system for interactive metabolic analysis
    • Hofmeyer, J.-H.S, Rohwer, J.M. & Snoep, J.L, eds, Stellenbosch University Press, Stellenbosch, South Africa
    • Sauro, H.M. (2000) Jarnac: a system for interactive metabolic analysis. In Animating the Cellular Map: Proceedings of the 9th International Meeting on BioThermoKinetics (Hofmeyer, J.-H.S., Rohwer, J.M. & Snoep, J.L., eds), Stellenbosch University Press, Stellenbosch, South Africa
    • (2000) Animating the Cellular Map: Proceedings of the 9th International Meeting on BioThermoKinetics
    • Sauro, H.M.1
  • 7
    • 0347511691 scopus 로고    scopus 로고
    • Next generation simulation tools: The systems biology workbench and biospice integration
    • Sauro, H.M., Hucka, M., Finney, A., Wellock, C., Bolouri, H., Doyle, J. & Kitano, H. (2003) Next generation simulation tools: the systems biology workbench and biospice integration. OMICS, 7, 355-372
    • (2003) OMICS , vol.7 , pp. 355-372
    • Sauro, H.M.1    Hucka, M.2    Finney, A.3    Wellock, C.4    Bolouri, H.5    Doyle, J.6    Kitano, H.7
  • 8
    • 0348049802 scopus 로고    scopus 로고
    • Systems biology markup language: Level 2 and beyond
    • Finney, A. & Hucka, M. (2003) Systems biology markup language: level 2 and beyond. Biochem. Soc Trans. 31, 1472-1473
    • (2003) Biochem. Soc Trans , vol.31 , pp. 1472-1473
    • Finney, A.1    Hucka, M.2
  • 10
    • 33947623106 scopus 로고    scopus 로고
    • SBMLeditor: Effective creation of models in the systems biology markup language (SBML)
    • Rodriguez, N., Donizelli, M. & Le Novere, N. (2007) SBMLeditor: effective creation of models in the systems biology markup language (SBML). BMC Bioinformatics 8, 79
    • (2007) BMC Bioinformatics , vol.8 , pp. 79
    • Rodriguez, N.1    Donizelli, M.2    Le Novere, N.3
  • 11
    • 33947680868 scopus 로고    scopus 로고
    • Model storage, exchange and integration
    • Le Novere, N. (2006) Model storage, exchange and integration. BMC Neurosci. 7 (Suppl I), S11
    • (2006) BMC Neurosci , vol.7 , Issue.SUPPL. I
    • Le Novere, N.1
  • 13
    • 33745075591 scopus 로고    scopus 로고
    • Tools for kinetic modeling of biochemical networks
    • Alves, R., Antunes, F. & Salvador, A. (2006) Tools for kinetic modeling of biochemical networks. Not Biotechnol. 24, 667-672
    • (2006) Not Biotechnol , vol.24 , pp. 667-672
    • Alves, R.1    Antunes, F.2    Salvador, A.3
  • 14
    • 33747825750 scopus 로고    scopus 로고
    • A model diagram layout extension for SBML
    • Gauges, R., Kummer, U., Sahle, S. & Wegner, K. (2006) A model diagram layout extension for SBML. Bioinformatics 22, 1879-1885
    • (2006) Bioinformatics , vol.22 , pp. 1879-1885
    • Gauges, R.1    Kummer, U.2    Sahle, S.3    Wegner, K.4
  • 17
    • 0014322529 scopus 로고
    • A machine-independent language for the simulation of complex chemical and biochemical systems
    • Garflnkel, D. (1968) A machine-independent language for the simulation of complex chemical and biochemical systems. Comput Biomed. Res. 2, 31-44
    • (1968) Comput Biomed. Res , vol.2 , pp. 31-44
    • Garflnkel, D.1
  • 20
    • 0032492834 scopus 로고    scopus 로고
    • Predicting temporal fluctuations in an intracellular signalling pathway
    • Morton-Firth, C.J. & Bray, D. (1998) Predicting temporal fluctuations in an intracellular signalling pathway. J. Theor. Biol. 192, 117-128
    • (1998) J. Theor. Biol , vol.192 , pp. 117-128
    • Morton-Firth, C.J.1    Bray, D.2
  • 21
    • 14844289958 scopus 로고    scopus 로고
    • Automatic generation of cellular reaction networks with moleculizer 1.0
    • Lok, L & Brent, R. (2005) Automatic generation of cellular reaction networks with moleculizer 1.0. Not Biotechnol. 23, 131-136
    • (2005) Not Biotechnol , vol.23 , pp. 131-136
    • Lok, L.1    Brent, R.2
  • 23
    • 0032776303 scopus 로고    scopus 로고
    • Molecular interaction map of the mammalian cell cycle control and dna repair systems
    • Kohn, K.W. (1999) Molecular interaction map of the mammalian cell cycle control and dna repair systems. Mol. Biol. Cell 10, 2703-2734
    • (1999) Mol. Biol. Cell , vol.10 , pp. 2703-2734
    • Kohn, K.W.1
  • 24
    • 33750735728 scopus 로고    scopus 로고
    • Depicting combinatorial complexity with the molecular interaction map notation
    • Kohn, K.W., Aladjem, M.I., Kim, S., Weinstein, J.N. & Pommier, Y. (2006) Depicting combinatorial complexity with the molecular interaction map notation. Mol. Syst Biol. 2, 51
    • (2006) Mol. Syst Biol , vol.2 , pp. 51
    • Kohn, K.W.1    Aladjem, M.I.2    Kim, S.3    Weinstein, J.N.4    Pommier, Y.5
  • 25
    • 23444439817 scopus 로고    scopus 로고
    • Using process diagrams for the graphical representation of biological networks
    • Kitano, H., Funahashi, A., Matsuoka, Y. & Oda, K. (2005) Using process diagrams for the graphical representation of biological networks. Not Biotechnol. 23, 961-966
    • (2005) Not Biotechnol , vol.23 , pp. 961-966
    • Kitano, H.1    Funahashi, A.2    Matsuoka, Y.3    Oda, K.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.