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Volumn 99, Issue 1, 2009, Pages 73-81

A nested-polymerase chain reaction protocol for detection and population biology studies of Peronospora arborescens, the downy mildew pathogen of opium poppy, using herbarium specimens and asymptomatic, fresh plant tissues

Author keywords

Ancient DNA; Biogeography; Seed detection

Indexed keywords

PLANT DNA; RIBOSOMAL SPACER DNA;

EID: 58149218217     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/PHYTO-99-1-0073     Document Type: Article
Times cited : (12)

References (44)
  • 1
    • 0033787290 scopus 로고    scopus 로고
    • Seed transmission of maize downy mildew (Peronosclerospora sorghi) in Nigeria
    • Adenle, V. O., and Cardwell, K. F. 2000. Seed transmission of maize downy mildew (Peronosclerospora sorghi) in Nigeria. Plant Pathol. 49:628-634.
    • (2000) Plant Pathol , vol.49 , pp. 628-634
    • Adenle, V.O.1    Cardwell, K.F.2
  • 2
    • 26244465164 scopus 로고    scopus 로고
    • Phylogenetic analysis and real time PCR detection of a presumably undescribed Peronospora species on sweet basil and sage
    • Belbahri, L., Calmin, G., Pawlowski, J., and Lefort, F. 2005. Phylogenetic analysis and real time PCR detection of a presumably undescribed Peronospora species on sweet basil and sage. Mycol. Res. 109:1276-1287.
    • (2005) Mycol. Res , vol.109 , pp. 1276-1287
    • Belbahri, L.1    Calmin, G.2    Pawlowski, J.3    Lefort, F.4
  • 4
    • 0028006015 scopus 로고
    • In vitro spore germination and infection of cultivars of Rubus and Rosa by downy mildews from both hosts
    • Breese, W. A., Schattock, R. C., Williamson, B., and Hackett, C. 1994. In vitro spore germination and infection of cultivars of Rubus and Rosa by downy mildews from both hosts. Ann. Appl. Biol. 125:73-85.
    • (1994) Ann. Appl. Biol , vol.125 , pp. 73-85
    • Breese, W.A.1    Schattock, R.C.2    Williamson, B.3    Hackett, C.4
  • 5
    • 1242322026 scopus 로고    scopus 로고
    • Diversity of the Hyaloperonospora parasitica complex from core brassicaceous hosts based on ITS rDNA sequences
    • Choi, Y.-J., Hong, S.-B., and Shin, H.-D. 2003. Diversity of the Hyaloperonospora parasitica complex from core brassicaceous hosts based on ITS rDNA sequences. Mycol. Res. 107:1314-1322.
    • (2003) Mycol. Res , vol.107 , pp. 1314-1322
    • Choi, Y.-J.1    Hong, S.-B.2    Shin, H.-D.3
  • 6
    • 23744441677 scopus 로고    scopus 로고
    • A re-consideration of Pseudoperonospora cubensis and P. humuli based on molecular and morphological data
    • Choi, Y.-J., Hong, S.-B., and Shin, H.-D. 2005. A re-consideration of Pseudoperonospora cubensis and P. humuli based on molecular and morphological data. Mycol. Res. 109:841-848.
    • (2005) Mycol. Res , vol.109 , pp. 841-848
    • Choi, Y.-J.1    Hong, S.-B.2    Shin, H.-D.3
  • 7
    • 34249287352 scopus 로고    scopus 로고
    • Re-consideration of Peronospora farinosa infecting Spinacia oleracea as distinct species, Peronospora effusa
    • Choi Y.-J., Hong, S.-B., and Shin, H.-D. 2007. Re-consideration of Peronospora farinosa infecting Spinacia oleracea as distinct species, Peronospora effusa. Mycol. Res. 111:381-391.
    • (2007) Mycol. Res , vol.111 , pp. 381-391
    • Choi, Y.-J.1    Hong, S.-B.2    Shin, H.-D.3
  • 8
    • 0000341498 scopus 로고
    • Seed infection and latent infection of sunflowers by Plasmopara halstedii
    • Cohen, Y., and Sackston, W. E. 1974. Seed infection and latent infection of sunflowers by Plasmopara halstedii. Can. J. Bot. 52:231-238.
    • (1974) Can. J. Bot , vol.52 , pp. 231-238
    • Cohen, Y.1    Sackston, W.E.2
  • 9
    • 0036329760 scopus 로고    scopus 로고
    • Peronospora-like fungi (Chromista, Peronosporales) parasitic on Brassicaceae and related hosts
    • Constantinescu, O., and Fatehi, J. 2002. Peronospora-like fungi (Chromista, Peronosporales) parasitic on Brassicaceae and related hosts. Nova Hedwigia 74:291-338.
    • (2002) Nova Hedwigia , vol.74 , pp. 291-338
    • Constantinescu, O.1    Fatehi, J.2
  • 10
    • 0242556092 scopus 로고    scopus 로고
    • An ITS-based phylogenetic analysis of the relationships between Peronospora and Phytophthora
    • P. T. N. Spencer, U. Gisi, and A. Lebeda, eds. Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Cooke, D. E. L., Williams, N. A., Williamson, B., and Duncan, J. M. 2002. An ITS-based phylogenetic analysis of the relationships between Peronospora and Phytophthora. Pages 161-165 in: Advances in Downy Mildew Research. P. T. N. Spencer, U. Gisi, and A. Lebeda, eds. Kluwer Academic Publishers, Dordrecht, The Netherlands.
    • (2002) Advances in Downy Mildew Research , pp. 161-165
    • Cooke, D.E.L.1    Williams, N.A.2    Williamson, B.3    Duncan, J.M.4
  • 11
    • 0032243129 scopus 로고    scopus 로고
    • Downy mildew of Papaver somniferum in Tasmania
    • Cotterill, P. J., and Pascoe, I. G. 1998. Downy mildew of Papaver somniferum in Tasmania. Australas. Plant Pathol. 27:263-264.
    • (1998) Australas. Plant Pathol , vol.27 , pp. 263-264
    • Cotterill, P.J.1    Pascoe, I.G.2
  • 12
    • 4043144336 scopus 로고    scopus 로고
    • Towards an understanding of the evolution of the downy mildews
    • P. T. N. Spencer, U. Gisi, and A. Lebeda, eds. Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Dick, M. W. 2002. Towards an understanding of the evolution of the downy mildews. Pages 1-57 in: Advances in Downy Mildew Research. P. T. N. Spencer, U. Gisi, and A. Lebeda, eds. Kluwer Academic Publishers, Dordrecht, The Netherlands.
    • (2002) Advances in Downy Mildew Research , pp. 1-57
    • Dick, M.W.1
  • 13
    • 58149264164 scopus 로고
    • The nature of systemic invasion of stem and leaves of sunflowers by Plasmopara helianthi Novot. var. helianthi Novot. with mechanism of sporulation and zoospore release
    • Döken, M. T. 1986. The nature of systemic invasion of stem and leaves of sunflowers by Plasmopara helianthi Novot. var. helianthi Novot. with mechanism of sporulation and zoospore release. J. Phytopathol. 117:270-275.
    • (1986) J. Phytopathol , vol.117 , pp. 270-275
    • Döken, M.T.1
  • 14
    • 1542448662 scopus 로고    scopus 로고
    • Systematic Botany and Mycology Laboratory, U. S. Dep. Agric. Agric. Res. Serv. Online publication retrieved June 2, 2008, from
    • Farr, D. F., Rossman, A. Y., Palm, M. E., and McCray, E. B. Fungal Databases, Systematic Botany and Mycology Laboratory, U. S. Dep. Agric. Agric. Res. Serv. Online publication retrieved June 2, 2008, from http://nt.ars-grin. gov/fungaldatabases/.
    • Fungal Databases
    • Farr, D.F.1    Rossman, A.Y.2    Palm, M.E.3    McCray, E.B.4
  • 16
    • 34247502891 scopus 로고    scopus 로고
    • Preliminary checklist of Albuginales and Peronosporales (Chromista) reported from the Iberian Peninsula and Balearic Islands
    • Garcia-Blazquez, G., Constantinescu, O., Telleria, M. T., and Martin, M. P. 2006. Preliminary checklist of Albuginales and Peronosporales (Chromista) reported from the Iberian Peninsula and Balearic Islands. Mycotaxon 98:185-188.
    • (2006) Mycotaxon , vol.98 , pp. 185-188
    • Garcia-Blazquez, G.1    Constantinescu, O.2    Telleria, M.T.3    Martin, M.P.4
  • 17
    • 5344279619 scopus 로고    scopus 로고
    • Taxonomic aspects of Peronosporaceae inferred from Bayesian molecular phylogenetics
    • Göker, M., Voglmayr, H., Riethmüller, A.,Weiß, M., and Oberwinkler, F. 2003. Taxonomic aspects of Peronosporaceae inferred from Bayesian molecular phylogenetics. Can. J. Bot. 81:672-683.
    • (2003) Can. J. Bot , vol.81 , pp. 672-683
    • Göker, M.1    Voglmayr, H.2    Riethmüller, A.3    Weiß, M.4    Oberwinkler, F.5
  • 18
    • 34247547604 scopus 로고
    • The genus Peronospora in the Iberian peninsula, especially in northern Spain and Andorra
    • Gustavsson, A. 1991. The genus Peronospora in the Iberian peninsula, especially in northern Spain and Andorra. An. Jard. Bot. Madrid 49:3-38.
    • (1991) An. Jard. Bot. Madrid , vol.49 , pp. 3-38
    • Gustavsson, A.1
  • 19
    • 0030301268 scopus 로고    scopus 로고
    • Modern approaches to species concepts in downy mildews
    • Hall, G. S. 1996. Modern approaches to species concepts in downy mildews. Plant Pathol. 45:1009-1026.
    • (1996) Plant Pathol , vol.45 , pp. 1009-1026
    • Hall, G.S.1
  • 20
    • 0242660322 scopus 로고
    • Seed transmission of spinach downy mildew
    • Inava, T., Takahashi, K., and Morinaka, T. 1983. Seed transmission of spinach downy mildew. Plant Dis. 67:1139-1141.
    • (1983) Plant Dis , vol.67 , pp. 1139-1141
    • Inava, T.1    Takahashi, K.2    Morinaka, T.3
  • 21
    • 0036867254 scopus 로고    scopus 로고
    • Detection of Phytophthora nicotianae and P. citrophthora in citrus roots and soils by nested PCR
    • Ippolito, A., Schena, L., and Nigro, F. 2002. Detection of Phytophthora nicotianae and P. citrophthora in citrus roots and soils by nested PCR. Eur. J. Plant Pathol. 108:855-868.
    • (2002) Eur. J. Plant Pathol , vol.108 , pp. 855-868
    • Ippolito, A.1    Schena, L.2    Nigro, F.3
  • 22
    • 35348944452 scopus 로고    scopus 로고
    • Three new races of the spinach downy mildew pathogen identified by a modified set of spinach differentials
    • Irish, B. M., Correll, J. C., Koike, S. T., and Morelock, T. E. 2007. Three new races of the spinach downy mildew pathogen identified by a modified set of spinach differentials. Plant Dis. 91:1392-1396.
    • (2007) Plant Dis , vol.91 , pp. 1392-1396
    • Irish, B.M.1    Correll, J.C.2    Koike, S.T.3    Morelock, T.E.4
  • 24
    • 36049007650 scopus 로고    scopus 로고
    • First report of downy mildew of opium poppy caused by Peronospora arborescens in Spain
    • Landa, B. B., Montes-Borrego, M., Muñoz-Ledesma, F. J., and Jiménez-Díaz, R. M. 2005. First report of downy mildew of opium poppy caused by Peronospora arborescens in Spain. Plant Dis. 89:338.
    • (2005) Plant Dis , vol.89 , pp. 338
    • Landa, B.B.1    Montes-Borrego, M.2    Muñoz-Ledesma, F.J.3    Jiménez-Díaz, R.M.4
  • 25
    • 36049029944 scopus 로고    scopus 로고
    • Phylogenetic analysis of downy mildew pathogens of opium poppy and PCR-based in-planta and seed detection of Peronospora arborescens
    • Landa, B. B., Montes-Borrego, M., Muñoz-Ledesma, F. J., and Jiménez-Díaz, R. M. 2007. Phylogenetic analysis of downy mildew pathogens of opium poppy and PCR-based in-planta and seed detection of Peronospora arborescens. Phytopathology 97:1380-1390.
    • (2007) Phytopathology , vol.97 , pp. 1380-1390
    • Landa, B.B.1    Montes-Borrego, M.2    Muñoz-Ledesma, F.J.3    Jiménez-Díaz, R.M.4
  • 26
    • 33646015090 scopus 로고    scopus 로고
    • Amplification of DNA of Xanthomonas axonopodis pv. citri from historic citrus canker herbarium specimens
    • Li, W., Brlansky, R. H., and Hartung, J. S. 2006. Amplification of DNA of Xanthomonas axonopodis pv. citri from historic citrus canker herbarium specimens. J. Microbiol. Methods 65:237-246.
    • (2006) J. Microbiol. Methods , vol.65 , pp. 237-246
    • Li, W.1    Brlansky, R.H.2    Hartung, J.S.3
  • 27
    • 44349169510 scopus 로고    scopus 로고
    • Downy mildew of commercial opium poppy crops in France is caused by Peronospora arborescens
    • Montes-Borrego, M., Muñoz-Ledesma, F. J., Jiménez- Díaz, R. M., and Landa, B. B. 2008. Downy mildew of commercial opium poppy crops in France is caused by Peronospora arborescens. Plant Dis. 92:834.
    • (2008) Plant Dis , vol.92 , pp. 834
    • Montes-Borrego, M.1    Muñoz-Ledesma, F.J.2    Jiménez- Díaz, R.M.3    Landa, B.B.4
  • 28
    • 0032978831 scopus 로고    scopus 로고
    • Postulation of virulence groups and resistance factors in the quinoa/downy mildew pathosystem using material from Ecuador
    • Ochoa, J., Frinking, H. D., and Jacobs T. H. 2005. Postulation of virulence groups and resistance factors in the quinoa/downy mildew pathosystem using material from Ecuador. Plant Pathol. 48:425-430.
    • (2005) Plant Pathol , vol.48 , pp. 425-430
    • Ochoa, J.1    Frinking, H.D.2    Jacobs, T.H.3
  • 30
    • 0033789605 scopus 로고    scopus 로고
    • A comparison of Peronospora parasitica (downy mildew) isolates from Arabidopsis thaliana and Brassica oleracea using amplified fragment length polymorphism and internal transcribed spacer 1 (ITS1) sequence analyses
    • Rehmany, A. P., Lynn, J. R., Tör, M., Holub, E. B., and Beynon, J. L. 2000. A comparison of Peronospora parasitica (downy mildew) isolates from Arabidopsis thaliana and Brassica oleracea using amplified fragment length polymorphism and internal transcribed spacer 1 (ITS1) sequence analyses. Fungal Genet. Biol. 30:95-103.
    • (2000) Fungal Genet. Biol , vol.30 , pp. 95-103
    • Rehmany, A.P.1    Lynn, J.R.2    Tör, M.3    Holub, E.B.4    Beynon, J.L.5
  • 31
    • 1842613259 scopus 로고
    • New or interesting British plant diseases
    • Reid, D. A. 1969. New or interesting British plant diseases. Trans. Br. Mycol. Soc. 52:19-38.
    • (1969) Trans. Br. Mycol. Soc , vol.52 , pp. 19-38
    • Reid, D.A.1
  • 32
    • 0036769336 scopus 로고    scopus 로고
    • Phylogenetic relationships of the downy mildews (Peronosporales) and related groups based on nuclear large subunit ribosomal DNA sequences
    • Riethmuller, A., Voglmayr, H., Göker, M., Weiß, M., and Oberwinkler, F. 2002. Phylogenetic relationships of the downy mildews (Peronosporales) and related groups based on nuclear large subunit ribosomal DNA sequences. Mycologia 94:834-849.
    • (2002) Mycologia , vol.94 , pp. 834-849
    • Riethmuller, A.1    Voglmayr, H.2    Göker, M.3    Weiß, M.4    Oberwinkler, F.5
  • 33
    • 0031758195 scopus 로고    scopus 로고
    • The importance of archival and herbarium materials in understanding the role of oospores in late blight epidemics of the past
    • Ristaino, J. B. 1998. The importance of archival and herbarium materials in understanding the role of oospores in late blight epidemics of the past. Phytopathology 88:1120-1130.
    • (1998) Phytopathology , vol.88 , pp. 1120-1130
    • Ristaino, J.B.1
  • 34
    • 0035822055 scopus 로고    scopus 로고
    • PCR amplification of the Irish potato famine pathogen from historic specimens
    • Ristaino, J. B., Groves, C. T., and Parra, G. R. 2001. PCR amplification of the Irish potato famine pathogen from historic specimens. Nature 411:695-697.
    • (2001) Nature , vol.411 , pp. 695-697
    • Ristaino, J.B.1    Groves, C.T.2    Parra, G.R.3
  • 35
    • 38349011349 scopus 로고    scopus 로고
    • Development and application of a PCR-based 'molecular tool box' for the identification of Phytophthora species damaging forests and natural ecosystems
    • Schena, L., Duncan, J. M., and Cooke, D. E. L. 2008. Development and application of a PCR-based 'molecular tool box' for the identification of Phytophthora species damaging forests and natural ecosystems. Plant Pathol. 57:64-75.
    • (2008) Plant Pathol , vol.57 , pp. 64-75
    • Schena, L.1    Duncan, J.M.2    Cooke, D.E.L.3
  • 36
    • 1842483422 scopus 로고    scopus 로고
    • Phylogenetic analysis of the downy mildew pathogen of oilseed poppy in Tasmania, and its detection by PCR
    • Scott, J. B., Hay, F. S., and Wilson, C. R. 2004. Phylogenetic analysis of the downy mildew pathogen of oilseed poppy in Tasmania, and its detection by PCR. Mycol. Res. 108:98-295.
    • (2004) Mycol. Res , vol.108 , pp. 98-295
    • Scott, J.B.1    Hay, F.S.2    Wilson, C.R.3
  • 37
    • 0037569435 scopus 로고    scopus 로고
    • Spatiotemporal analysis of epiphytotics of downy mildew of oilseed poppy in Tasmania, Australia
    • Scott, J. B., Hay, F. S., Wilson, C. R., Cotterill, P. J., and Fist, A. J. 2003. Spatiotemporal analysis of epiphytotics of downy mildew of oilseed poppy in Tasmania, Australia. Phytopathology 93:752-757.
    • (2003) Phytopathology , vol.93 , pp. 752-757
    • Scott, J.B.1    Hay, F.S.2    Wilson, C.R.3    Cotterill, P.J.4    Fist, A.J.5
  • 38
    • 23944445380 scopus 로고    scopus 로고
    • Development of specific PCR primers for identification and detection of Phytophthora capsici Leon
    • Silvar, C., Duncan, J. M., Cooke, D. E. L., Williams, N. A., Díaz, J., and Merino, F. 2005. Development of specific PCR primers for identification and detection of Phytophthora capsici Leon. Eur. J. Plant Pathol. 112:3-52.
    • (2005) Eur. J. Plant Pathol , vol.112 , pp. 3-52
    • Silvar, C.1    Duncan, J.M.2    Cooke, D.E.L.3    Williams, N.A.4    Díaz, J.5    Merino, F.6
  • 39
    • 4644286053 scopus 로고    scopus 로고
    • On the necessity of new characters for classification and systematics of biotrophic Peronosporomycetes
    • Spring, O., and Thines, M. 2004. On the necessity of new characters for classification and systematics of biotrophic Peronosporomycetes. Planta 219:910-914.
    • (2004) Planta , vol.219 , pp. 910-914
    • Spring, O.1    Thines, M.2
  • 40
    • 34848868122 scopus 로고    scopus 로고
    • Specific detection of Peronospora tabacina by PCR-amplified rDNA Sequences
    • Tsay, J.-G., Chu, C., Chuang, Y.-H., and Chen, R.-S. 2006. Specific detection of Peronospora tabacina by PCR-amplified rDNA Sequences. Plant Pathol. J. 5:78-382.
    • (2006) Plant Pathol. J , vol.5 , pp. 78-382
    • Tsay, J.-G.1    Chu, C.2    Chuang, Y.-H.3    Chen, R.-S.4
  • 41
    • 0242495270 scopus 로고    scopus 로고
    • Phylogenetic relationships of Peronospora and related genera based on nuclear ribosomal ITS sequences
    • Voglmayr, H. 2003. Phylogenetic relationships of Peronospora and related genera based on nuclear ribosomal ITS sequences. Mycol. Res. 107:1132-1142.
    • (2003) Mycol. Res , vol.107 , pp. 1132-1142
    • Voglmayr, H.1
  • 42
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. T. White, eds. Academic Press Inc, New York
    • White, T. J., Bruns, T., Lee, S., and Taylor, J. W. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Pages 315-322 in: PCR Protocols: A Guide to Methods and Applications. M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. T. White, eds. Academic Press Inc., New York.
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.W.4
  • 44
    • 0037512385 scopus 로고
    • Location of oospores in buckwheat seed and probable roles of oospores and conidia of Peronospora ducometi in the disease cycle on buckwheat
    • Zimmer, R. C., McKeen, W. E., and Campbell, C. G. 1992. Location of oospores in buckwheat seed and probable roles of oospores and conidia of Peronospora ducometi in the disease cycle on buckwheat. J. Phytopathol. 135:217-223.
    • (1992) J. Phytopathol , vol.135 , pp. 217-223
    • Zimmer, R.C.1    McKeen, W.E.2    Campbell, C.G.3


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