Electrochemical branched-DNA assay for polymerase chain reaction-free detection and quantification of oncogenes in messenger RNA

Analytical Chemistry

Volumn 80, Issue 24, 2008, Pages 9402-9410

  Lee, Ai Cheng ^a,b   Dai, Ziyu ^a   Chen, Baowei ^a   Wu, Hong ^a   Wang, Jun ^a   Zhang, Aiguo ^c,d   Zhang, Lurong ^e   Lim, Tit Meng ^b   Lin, Yuehe ^a  

^a PACIFIC NORTHWEST NATIONAL LABORATORY   (United States)

^b NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

^c Panomics Inc   (United States)

^d DiaCarta LLC   (United States)

^e UNIVERSITY OF ROCHESTER MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALKALINE PHOSPHATASES; CELL LINES; COPY NUMBERS; DETECTION LIMITS; DIRECT DETECTIONS; DIRECT USES; DISEASE DIAGNOSES; DNA ASSAYS; HIGH LOADINGS; MESSENGER RIBONUCLEIC ACIDS; MICROPLATE WELLS; PCR AMPLIFICATIONS; PCR-FREE; POLYMERASE CHAIN REACTIONS; QUANTITATIVE ANALYSES; QUANTITATIVE TOOLS; TARGET SIGNALS; VOLTAMMETRIC; WIDE DYNAMIC RANGES;

AMPLIFICATION; CELL CULTURE; COSMIC RAYS; DNA; GENES; NUCLEIC ACIDS; ONCOGENIC VIRUSES; ORGANIC ACIDS; POLYMERIZATION; PUMPS; RNA; TROPOSPHERE;

TARGETS;

ALKALINE PHOSPHATASE; BRANCHED DNA SIGNAL AMPLIFICATION ASSAY; ELECTROCHEMISTRY; FUSION PROTEINS, BCR-ABL; HUMANS; LEUKEMIA, MYELOID, CHRONIC-PHASE; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER; SENSITIVITY AND SPECIFICITY; TUMOR CELLS, CULTURED;

EID: 58149132281     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac801263r     Document Type: Article

References (25)

1. Radich, J. P. Best Practice Res. Clin. Haematol. 2002, 15, 91-103.
2. Zhou, L.; Otulakowski, G.; Lau, C. Y. Methods Enzymol. 1997, 282, 64-76.
3. Capaldi, S.; Getts, R. C.; Jayasena, S. D. Nucleic Acids Res. 2000, 28, e21.
4. Collins, M. L.; Irvine, B.; Tyner, D.; Fine, E.; Zayati, C.; Chang, C. A.; Horn, T.; Ahle, D.; Detmer, J.; Shen, L. P.; Kolberg, J.; Bushnell, S.; Urdea, M. S.; Ho, D. D. Nucleic Acids Res. 1997, 25, 2979-2984.
5. Wang, J.; Polsky, R.; Merkoci, A.; Turner, K. L. Langmuir 2003, 19, 989-991.
6. Liu, G.; Wang, J.; Wu, H.; Lin, Y. Anal. Chem. 2006, 78, 7417-7423.
7. Lee, A. C.; Ye, J. S.; Tan, S. N.; Poenar, D. P.; Sheu, F. S.; Heng, C. K.; Lim, T. M. Nanotechnology 2007, 18, 455102.
8. Wang, J.; Liu, G.; Rasul Jan, M. J. Am. Chem. Soc. 2004, 126, 3010-3011.
9. Munge, B.; Liu, G.; Collins, G.; Wang, J. Anal. Chem. 2005, 77, 4662-4666.
10. Patolsky, F.; Lichtenstein, A.; Kotler, M.; Willner, I. Angew. Chem., Int. Ed. 2001, 40, 2261-2265.
11. Patolsky, F.; Lichtenstein, A.; Willner, I. Chem. Eur. J. 2003, 9, 1137-1145.
12. Nilsen, T. W.; Grayzel, J.; Prensky, W. J. Theor. Biol. 1997, 187, 273-284.
13. Demidov, V. V. Expert Rev. Mol. Diagn. 2003, 3, 121-124.
14. Detmer, J.; Lagier, R.; Flynn, J.; Zayati, C.; Kolberg, J.; Collins, M.; Urdea, M.; Sánchez-Pescador, R. J. Clin. Microbiol. 1996, 34, 901-907.
15. Hendricks, D. A.; Stowe, B. J.; Hoo, B. S.; Kolberg, J.; Irvine, B. D.; Neuwald, P. D.; Urdea, M. S.; Perrillo, R. P. Am. J. Clin. Pathol 1995, 104, 537-546.
16. Zaaijer, H. L.; ter Borg, F.; Cuypers, H. T.; Hermus, M. C.; Lelie, P. N. J. Clin. Microbiol. 1994, 32, 2088-2091.
17. Grimes, R. M.; Lewis, S. T.; Visnegarwala, F.; Goodly, J.; Sutton, R.; Rodriguez-Barradas, M. HIV Clin. Trials 2003, 4, 92-98.
18. Pasquier, C.; Sandres, K.; Salama, G.; Puel, J.; Izopet, J. J. Virol. Methods 1999, 81, 123-129.
19. Nolte, F. S.; Boysza, J.; Thurmond, C.; Clark, W. S.; Lennox, J. L. J. Clin. Microbiol. 1998, 36, 716-720.
20. Wu, S. J.; Spink, D. C.; Spink, B. C.; Kaminsky, L. S. Anal. Biochem. 2003, 312, 162-166.
21. Xie, H.; Yu, Y. H.; Xie, F.; Lao, Y. Z.; Gao, Z. Anal. Chem. 2004, 76, 4023-4029.
22. Zhang, N.; Harrex, A. L.; Holland, B. R.; Fenton, L. E.; Cannon, R.; Schmid, J. Genome Res. 2003, 13, 2005-2017.
23. SuperScript First-Strand Synthesis System for RT-PCR Instruction Manual, Version D; Invitrogen: Carlsbad, CA, 2003; p27.
24. Oligotex® Handbook, 2nd ed.; Qiagen: Valencia, CA,2002; p 94.
25. Collins, M. L.; Zayati, C.; Detmer, J. J.; Daly, B.; Kolberg, J. A.; Cha, T. A.; Irvine, B. D.; Tucker, J.; Urdea, M. S. Anal. Biochem. 1995, 226, 120-129.