Lamin A/C and polymeric actin in genome organization

Molecules and Cells

Volumn 26, Issue 4, 2008, Pages 356-361

  Ondřej, Vladan ^a,b   Lukasová, Emilie ^a   Krejčí, Jana ^a   Matula, Pavel ^c   Kozubek, Stanislav ^a  

^a INSTITUTE OF BIOPHYSICS   (Czech Republic)

^b PALACKÝ UNIVERSITY   (Czech Republic)

^c MASARYK UNIVERSITY   (Czech Republic)

Author keywords

Chromosome territories; Lamin A C; Nuclear organization; Polymeric actin

Indexed keywords

ACTIN; CYTOCHALASIN; EMERIN; LAMIN A; LAMIN C;

ACTIN POLYMERIZATION; ARTICLE; CELL DISRUPTION; CELL NUCLEUS MEMBRANE; CELL STRAIN MCF 7; CHROMOSOME 1; CHROMOSOME 13; CHROMOSOME 2; CHROMOSOME STRUCTURE; CONTROLLED STUDY; DOWN REGULATION; GENE EXPRESSION REGULATION; GENE SILENCING; GENETIC LINKAGE; GENOME ANALYSIS; HETEROCHROMATIN; HUMAN; HUMAN CELL;

ACTINS; CELL LINE, TUMOR; CELL NUCLEUS; CELL SHAPE; CHROMOSOMES, HUMAN; DOWN-REGULATION; GENOME, HUMAN; HUMANS; LAMIN TYPE A; MICROSCOPY, CONFOCAL;

EID: 58049200249     PISSN: 10168478     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (28)

1. Albiez, H., Cremer, M., Tieri, C., Vecchio, L., Schermelleh, L., Dittrich, S., Küpper, K., Joffe, B., Thormeyer, T., von Hase, J., et al. (2006). Chromatin domains and the interchromatin compartment form structurally defined and functionally interacting nuclear networks. Chrom. Res. 14, 707-733.
2. Bettinger, B.T., Gilbert, D.M., and Amber, D.C. (2004). Actin up in the nucleus. Mol. Cell. Biol. 5, 410-415.
3. Bolzer, A., Kreth, G., Solovei, I., Koehler, D., Saracoglu, K., Fauth, Ch., Muller, S., Eils, R., Cremer, Ch., Speicher, M.R., et al. (2005). Three-dimensional maps of all chromosomes in human male fibroblast nuclei and prometaphase rosettes. PLoS Biol. 3, e157.
4. Boyle, S., Gilchrist, S., Bridger, J.M., Mahy, N.L., Ellis, J.A., and Bickmore, W.A. (2001). The spatial organization of human chromosomes within the nuclei of normal and emerin-mutant cells. Hum. Mol. Genet. 10, 211-219.
5. Caron, H., van Schaik, B., van der Mee, M., Baas, F., Riggins, G., van Sluis, P., Hermus, M.Ch., van Asperen, R., Boon, K., Voute, P.A., et al. (2001). The human transcriptome map: Clustering of highly expressed genes in chromosomal domains. Science 291, 1289-1292.
6. Cremer, T., and Cremer, C. (2001). Chromosome territories, nuclear architecture and gene regulation in mammalian cells. Nat. Rev. Genet. 2, 292-301.
7. Croft, J., Bridger, J., Perry, P., Boyle, S., Teague, P., and Bickmore, W. (1999). Differences in the localization and morphology of chromosomes in the human nucleus. J. Cell Biol. 145, 1119-1131.
8. Dunham, A., Matthews, L.H., Burton, J., Ashurst, J.L., Howe, K.L., Ashcroft, K.J., Beare, D.M., Burford, D.C., Hunt, S.E., Griffiths- Jones, S., et al. (2004). The DNA sequence and analysis of human chromosome 13. Nature 428, 522-528.
9. Goetze, S., Mateos-Langerak, J., Gierman, H.J., de Leeuw, W., Giromus, O., Indemans, M.H.G., Koster, J., Ondrej, V., Versteeg, R., and van Driel, R. (2007). The 3D structure of human interphase chromosome is related to the transcriptome map. Mol. Cell. Biol. 27, 4475-4487.
10. Guelen, L., Pagie, L., Brasset, E., Meuleman, W., Faza, M.B., Talhout, W., Eussen, B.H., de Klein, A., Wessels, L., de Laat, W., et al. (2008). Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions. Nature 453, 948-951.
11. Hofmann, W., Reichart, B., Ewald, A., Müller, E., Schmitt, I., Stauber, R.H., Lottspeich, F., Jockusch, B.M., Scheer, U., Hauber, J., et al. (2001). Cofactor requirements for nuclear export of Rev response element (RRE)- and constitutive transport element (CTE)-containing retroviral RNAs. An unexpected role for actin. J. Cell Biol. 152, 895-910.
12. Hofmann, W., Stojiljkovic, L., Fuchsova, B., Vargas, G.M., Mavrommatis, E., Philimonenko, V., Kysela, K., Goodrich, J.A., Lessard, J.L., Hope, T.J., et al. (2004). Actin is part of pre-initiation complexes and is necessary for transcription by RNA polymerase II. Nat. Cell. Biol. 5, 1094-1101.
13. Holaska, J.M., Wilson, K.L., and Mansharami, M. (2002). The nuclear envelope, lamins and nuclear assembly. Curr. Opin. Cell Biol. 14, 357-364.
14. Holaska, J.M., Kowalski, A.K., and Wilson, K.L. (2004). Emerin caps the pointed end of actin filaments: evidence for an actin cortical network at the nuclear inner membrane. PLoS Biol. 2, e231.
15. Kiseleva, E., Drummond, S.P., Goldberg, M.W., Rutheford, S.A., Allen, T.D., and Wilson, K.L., (2004). Actin- and protein-4.1- containing filaments link nuclear pore complexes to subnuclear organelles in Xenupus oocyte nuclei. J. Cell Sci. 117, 2481-2490.
16. Kozubek, M., Kozubek, S., Lukášová, E., Bártová, E., Skalníková, M., Matula, P., Matula, P., Jirsová, P., Cafourková, A., and Koutná, I. (2001). Combined confocal and wide-field highresolution citometry of fluorescence in situ hybridization-stained cells. Cytometry 45, 1-12.
17. Kozubek, S., Lukášová, E., Jirsová, P., Koutná, I., Kozubek, M., Gaňová, A., Bártová, E., Falk, M., and Paseková, R. (2002). 3D structure of the human genome: order in randomness. Chromosoma 111, 321-331.
18. Le Beyec, J., Xu, R., Lee, S.Y., Nelson, C.M., Ritzki, A., Alcaraz, J., and Bissell, M.J. (2007). Cell shape regulates global histone acetylation in human mammary epithelial cells. Exp. Cell Res. 313, 3066-3075.
19. Lee, K.K., Haraguchi, T., Lee, R.S., Koujin, T., Hiraoka, Y., and Wilson, K.L. (2001). Distinct functional domains in emerin bind lamin A and DNA-bridging protein BAF. J. Cell Sci. 114, 4567-4573.
20. Libotte, T., Zaim, H., Abraham, S., Padmakumar, V.C., Schneider, M., Lu, W., Munck, M., Hutchinson, Ch., Wehnert, M., Fahrenkrog, B., et al. (2005). Lamin A/C-dependent localization of nesprin-2, a giant scaffolder at the nuclear envelope. Mol. Biol. Cell 16, 3411-3424.
21. Lin, F., and Worman H.J. (1993). Structural organization of the human gene encoding nuclear lamin A and nuclear lamin C. J. Biol. Chem. 168, 16321-16326.
22. McDonald, D., Carrero, G., Andrin, Ch., de Vries, G., and Hendzel, M.J., (2006). Nucleoplasmic β-actin exists in a dynamic equilibrium between low-mobility polymeric species and rapidly diffusing populations. J. Cell Biol. 172, 541-552.
23. Meaburn, K.J., Misteli, T., and Soutoglou, E. (2007). Spatial genome organization in the formation of chromosomal translocations. Sem. Cancer Biol. 17, 80-90.
24. Misteli, T. (2007). Beyond the sequence: cellular organization of genome function. Cell 128, 787-800.
25. Moir, R.D., Spann, T.P., Herrmann, H., and Goldman, R.D. (2000). Disruption of nuclear lamin organization blocks the elongation phase of DNA replication. J. Cell Biol. 149, 1179-1191.
26. Segura-Totten, M., and Wilson, K.L. (2004). BAF: roles in chromatin, nuclear structure and retrovirus integration. Trends Cell Biol. 14, 261-266.
27. Shumaker, D.K., Kuczmarski, E.R., and Goldman, R.D. (2003). The nucleoskeleton: lamins and actin are major players in essential nuclear functions. Curr. Opin. Cell Biol. 15, 358-366.
28. Vlcek S., and Foisner R. (2007). Lamins and lamin-associated proteins in aging and disease. Curr. Opin. Cell Biol. 19, 298-304.