A text-mining approach for classification of genomic fragments

Proceedings - 2008 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW

Volumn , Issue , 2008, Pages 107-108

  Gadia, Vinay ^a   Rosen, Gail ^a  

^a Drexel University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOINFORMATICS; NUCLEIC ACIDS; ORGANIC ACIDS; TECHNICAL PRESENTATIONS;

AREA OF INTERESTS; BP FRAGMENTS; CLASSIFICATION TECHNIQUES; DNA SAMPLES; EUCLIDEAN; FEATURE SETS; FEATURE SUBSETS; GENOMIC FRAGMENTS; PERFORMANCE APPROACHES;

TEXT PROCESSING;

EID: 58049145645     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/BIBMW.2008.4686216     Document Type: Conference Paper

References (9)

1. D. A. Benson and et al., "Genbank," Nucleic Acids Research, vol. 36, 2008.
2. P. J. Turnbaugh and et al., "The human microbiome project," Nature, vol. 449, pp. 804-810, 2007.
3. "Sequencing the microbial soup," Nature Structural and Molecular Biology, vol. 15, no. 115, 2008.
4. J. Bohannon, "Confusing kinships," Science Magazine, 2008.
5. Z. Volkovich and et al., "The method of n-grams in large-scale clustering of dna texts," Pattern Recognition, 2005.
6. V. Kirzhner and et al., "Large-scale genome clustering across life based on a linguistic approach," Elsevier Journal of Biosystems, 2005.
7. G. Salton, A. Wong, and C. S. Yang, "A vector space model for automatic indexing," Communications of the ACM, vol. 18, no. 11, pp. 613-620, 1975.
8. S. Weiss and et al., "Text mining," in Predictive Methods for Analyzing Unstructured Information, Springer Science+Business Media, Ed., 2005.
9. Y. Fofanov, Y. Luo, C. Katili, and et al., "How independent are the appearances of n-mers in different genomes?," Bioinformatics, 2004.