Grapevine virus A-mediated gene silencing in Nicotiana benthamiana and Vitis vinifera

Journal of Virological Methods

Volumn 155, Issue 2, 2009, Pages 167-174

  Muruganantham, Mookkan ^a   Moskovitz, Yoni ^a   Haviv, Sabrina ^a   Horesh, Tamar ^a   Fenigstein, Annie ^a   Preez, Jacques du ^b   Stephan, Dirk ^b   Burger, Johan T ^b   Mawassi, Munir ^a  

^a VOLCANI CENTER   (Israel)

^b STELLENBOSCH UNIVERSITY   (South Africa)

Author keywords

Agroinoculation; Grapevine; Grapevine virus A; Phytoene desaturase; Virus vector; Virus induced gene silencing

Indexed keywords

PHYTOENE DESATURASE; UNCLASSIFIED DRUG; UNCLASSIFIED ENZYME; VIRUS VECTOR; OXIDOREDUCTASE; PHYTOENE DEHYDROGENASE;

ARTICLE; CONTROLLED STUDY; FUNCTIONAL GENOMICS; GENE SILENCING; GRAPE; NICOTIANA BENTHAMIANA; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; RHIZOBIUM; TOBACCO; VITIVIRUS; EVALUATION; FLEXIVIRIDAE; GENE EXPRESSION REGULATION; GENE VECTOR; GENETIC ENGINEERING; GENETICS; METABOLISM; PLANT GENE; PLANT LEAF; TRANSGENIC PLANT; VIROLOGY;

AGROBACTERIUM; FLEXIVIRIDAE; GRAPEVINE VIRUS A; NICOTIANA BENTHAMIANA; VITIS; VITIS VINIFERA; VITIVIRUS;

FLEXIVIRIDAE; GENE EXPRESSION REGULATION, PLANT; GENE SILENCING; GENES, PLANT; GENETIC ENGINEERING; GENETIC VECTORS; OXIDOREDUCTASES; PLANT LEAVES; PLANTS, GENETICALLY MODIFIED; RHIZOBIUM; TOBACCO; VITIS;

EID: 57749198637     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jviromet.2008.10.010     Document Type: Article

References (32)

1. Atkinson R.G., Bieleski L.R.F., Gleave A.P., Janssen B.J., and Morris B.A.M. Post-transcriptional silencing of chalcone synthase in petunia using a geminivirus-based episomal vector. Plant J. 15 (1998) 593-604
2. Baulcombe D.C. Fast forward genetics based on virus-induced gene silencing. Curr. Opin. Plant Biol. 2 (1999) 109-113
3. Bernstein E., Caudy A.A., Hammond S.M., and Hannon G.J. Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature 409 (2001) 363-366
4. Brigneti G., Martin-Hernandez A.M., Jin H., Chen J., and Baulcombe D.C. Virus-induced gene silencing in Solanum species. Plant J. 39 (2004) 264-272
5. Burch-Smith T.M., Anderson J.C., Martin G.B., and Dinesh-Kumar S.P. Applications and advantages of virus-induced gene silencing for gene function studies in plants. Plant J. 39 (2004) 734-746
6. Burton R.A., Gibeaut D.M., Bacic A., Findlay K., Roberts K., Hamilton A., Baulcombe D.C., and Fincher G.B. Virus-induced gene silencing of a plant cellulose synthase gene. Plant Cell 12 (2000) 691-706
7. Chang S., Puryear J., and Cairney J. A simple and efficient method for isolating RNA from pine trees. Plant Mol. Biol. Rep. 11 (1993) 113-116
8. Chevalier S., Greif C., Clauzel J.M., Walter B., and Fritsch C. Use of an immunocapture-polymerase chain reaction procedure for the detection of grapevine virus A in Kober stem grooving infected grapevines. J. Phytopathol. 143 (1995) 369-373
9. Chevalier, S., Digiaro, M., Savino, V., 1997. Further evidence that grapevine virus A is the agent of Kober stem grooving. Extended Abstracts, 12th Meeting of ICVG, Lisbon, pp. 39-40.
10. Chiba M., Reed J.C., Prokhnevsky A.I., Chapman E.J., Mawassi M., Koonin E.V., Carrington J.C., and Dolja V.V. Diverse suppressors of RNA silencing enhance agroinfection by a viral replicon. Virology 346 (2006) 7-14
11. Galiakparov N., Tanne E., Sela I., and Gafny R. Infectious RNA transcripts from Grapevine virus A cDNA clone. Virus Genes 19 (1999) 235-242
12. Galiakparov N., Goszczynski D.E., Che X., Batuman O., Bar-Joseph M., and Mawassi M. Two classes of subgenomic RNA of Grapevine Virus A produced by internal controller elements. Virology 312 (2003) 434-448
13. Galiakparov N., Tanne E., Mawassi M., Gafny R., and Sela I. ORF 5 of Grapevine Virus A encodes a nucleic acid-binding protein and affects pathogenesis. Virus Genes 27 (2003) 257-262
14. Galiakparov N., Tanne E., Sela I., and Gafny R. Functional analysis of the Grapevine Virus A genome. Virology 306 (2003) 42-50
15. Garau R., Prota V.A., Piredda R., Boscia D., and Prota U. On the possible relationship between Kober stem grooving and Grapevine Virus A. Vitis 33 (1994) 161-163
16. Haviv S., Galiakparov N., Goszczynski E.D., Batuman O., Czosnek H., and Mawassi M. Engineering the genome of Grapevine Virus A into a vector for expression of proteins in herbaceous plants. J. Virol. Meth. 132 (2006) 227-231
17. Holzberg S., Brosio P., Gross C., and Pogue G.P. Barley stripe mosaic virus-induced gene silencing in a monocot plant. Plant J. 30 (2002) 193-200
18. Johansen L.K., and Carrington J.C. Silencing on the spot. Induction and suppression of RNA silencing in the Agrobacterium-mediated transient expression system. Plant Physiol. 126 (2001) 930-938
19. Kumagai M.H., Donson J., Della-Cioppa G., Harvey D., Hanley K., and Grill L.K. Cytoplasmic inhibition of carotenoid biosynthesis with virus-derived RNA. Proc. Natl. Acad. Sci. U.S.A. 92 (1995) 1679-1683
20. Liu Y., Schiff M., Marathe R., and Dinesh-Kumar S.P. Tobacco Rar1, EDS1 and NPR1/NIM1 like genes are required for N-mediated resistance to tobacco mosaic virus. Plant J. 30 (2002) 415-429
21. Lu R., Martin-Hernandez A.M., Peart J.R., Malcuit I., and Baulcombe D.C. Virus-induced gene silencing in plants. Methods 30 (2003) 296-303
22. Martelli G.P., Adams M.J., Kreuze J.F., and Dolja V.V. Family Flexiviridae: a case study in virion and genome plasticity. Annu. Rev. Phytopathol. 45 (2007) 73-100
23. Murashige T., and Skoog F. A revised medium for rapid growth and bioassays with tobacco tissue cultures. Plant Physiol. 15 (1962) 473-497
24. Nykanen A., Haley B., and Zamore P.D. ATP requirements and small interfering RNA structure in the RNA interference pathway. Cell 107 (2001) 309-321
25. Ratcliff F., Martin-Hernandez A.M., and Baulcombe D.C. Tobacco rattle virus as a vector for analysis of gene function by silencing. Plant J. 25 (2001) 237-245
26. Ruiz M.T., Vionnet O., and Baulcombe D.C. Initiation and maintenance of virus-induced gene silencing. Plant Cell 10 (1998) 937-946
27. Ryu C.M., Anand A., Kang L., and Mysore K.S. Agrodrench: A novel and effective agroinoculation method for virus-induced gene silencing in roots and diverse Solanaceous species. Plant J. 40 (2004) 322-331
28. Saldarelli P., Dell'Orco M., and Minafra A. Infectious cDNA clones of two grapevine viruses. Arch. Virol. 145 (2000) 397-405
29. Satyanarayana T., Bar-Joseph M., Mawassi M., Albiach-Marti M.R., Ayllon M.A., Gowda S., Hilf M.E., Moreno P., Garnsey S.M., and Dawson W.O. Amplification of citrus tristeza virus from a cDNA clone and infection of citrus trees. Virology 280 (2001) 87-96
30. Shi B.J., Ding S.W., and Symons R.H. Plasmid vector for cloning infectious cDNAs from plant RNA viruses: high infectivity of cDNA clones of tomato aspermy cucumovirus. J. Gen. Virol. 78 (1997) 1181-1185
31. Wang Q., Mawassi M., Li P., Gafny R., Sela I., and Tanne E. Elimination of Grapevine Virus A (GVA) by cryopreservation of in vitro-grown shoot tips of Vitis vinifera L. Plant Sci. 165 (2003) 321-327
32. Zhou Z.Sh., Dell'Orco M., Saldarelli P., Turturo C., Minafra A., and Martelli G.P. Identification of an RNA-silencing suppressor in the genome of Grapevine Virus A. J. Gen. Virol. 87 (2006) 2387-2395