Phylogenetic analysis and arsenate reduction effect of the arsenic-reducing bacteria enriched from contaminated soils at an abandoned smelter site

Journal of Environmental Sciences

Volumn 20, Issue 12, 2008, Pages 1501-1507

  ZHANG, Xuexia ^a,b   JIA, Yongfeng ^a   WANG, Xin ^a   XU, Liying ^a  

^a INSTITUTE OF APPLIED ECOLOGY   (China)

^b UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

Author keywords

arsenic; microbial; phylogenetic analysis; reduction

Indexed keywords

BACTERIOLOGY; CLONING; NONMETALS; SCANNING ELECTRON MICROSCOPY; SMELTING; SOIL POLLUTION; SOILS; X RAY ANALYSIS; X RAY DIFFRACTION ANALYSIS;

16S RDNA; AQUEOUS ENVIRONMENTS; AQUEOUS PHASE; ARSENIC SULFIDES; CLONE NUMBERS; CONTAMINATED SOILS; ENERGY DISPERSIVE; FERRIC HYDROXIDES; GENE CLONE LIBRARIES; MICROBIAL; MICROBIAL DIVERSITIES; MICROBIAL REDUCTIONS; MOLECULAR PHYLOGENIES; PHYLOGENETIC ANALYSIS; REDUCTION EFFECTS; RESTRICTION FRAGMENT LENGTH POLYMORPHISMS; SEM-EDS; SLURRY EXPERIMENTS; X-RAY DIFFRACTIONS; YELLOW SOLIDS;

ARSENIC;

ARSENIC ACID DERIVATIVE; ARSENOUS ACID DERIVATIVE; BACTERIAL DNA; RNA 16S;

ARSENATE; GENETIC ANALYSIS; INCUBATION; PHYLOGENETICS; PHYLOGENY; SCANNING ELECTRON MICROSCOPY; SMELTING; SOIL BIOTA; SOIL POLLUTION; X-RAY DIFFRACTION;

ANAEROBIC BACTERIUM; ARTICLE; CHEMISTRY; GENETICS; INDUSTRIAL WASTE; METABOLISM; METALLURGY; MICROBIOLOGY; PHYLOGENY; POLYMERASE CHAIN REACTION; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SCANNING ELECTRON MICROSCOPY; SOIL POLLUTANT; X RAY DIFFRACTION;

ARSENATES; ARSENITES; BACTERIA, ANAEROBIC; DNA, BACTERIAL; INDUSTRIAL WASTE; METALLURGY; MICROSCOPY, ELECTRON, SCANNING; PHYLOGENY; POLYMERASE CHAIN REACTION; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RNA, RIBOSOMAL, 16S; SOIL MICROBIOLOGY; SOIL POLLUTANTS; X-RAY DIFFRACTION;

BACILLUS (BACTERIUM); BACTERIA (MICROORGANISMS); CALORAMATOR; CLOSTRIDIUM; OTUS;

EID: 57649193072     PISSN: 10010742     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1001-0742(08)62556-5     Document Type: Article

References (28)

1. Ahmann D., Krumholz L.K., Hemond H.F., Loveley D.R., and Morel F.M.M. Microbial mobilization of arsenic from sediments of the aberjona watershed. Environ Sci Technol 31 (1997) 2923-2930
2. Ahmann D., Roberts A.L., Krumholz L.R., and Morel F.M.M. Microbe grows by reducing arsenic. Nature (London) 371 (1994) 750
3. Ausubel F.M., Brent R., Kingston R.E., Seidman J.G., Moore D.D., Smith J.A., and Struhl K. Short Protocols in Molecular Biology. 4th ed. (2005), Science Press, Beijing 55
4. Coker V.S., Gault A.G., Pearce C.I., Van der Laan G., Telling N.D., Charnock J.M., Polya D.A., and Lloyd J.M. XAS and XMCD evidence for species-dependent partitioning of arsenic during microbial reduction of ferrihydrite to magnetite. Environ Sci Technol 40 (2006) 7745-7750
5. Cullen W.R., and Reimer K.J. Arsenic speciation in the environment. Chem Rev 89 (1989) 713-764
6. Dixit S., and Hering J.G. Comparison of As(V) and As(III) sorption onto iron oxide minerals: implications for arsenic mobility. Environ Sci Technol 37 (2003) 4182-4189
7. Fredrickson J.K., Zachara J.M., Kennedy D.W., Dong H., Onstott T.C., Hinman N.W., and Li S. Biogenic iron mineralization accompanying the dissimilatory reduction of hydrous ferric oxide by a groundwater bacterium. Geochim Cosmochim Acta 62 (1998) 3239-3257
8. Hansel C.M., Benner S.G., Neiss J., Dohnalkova A., Kukkadapu R.K., and Fendorf S. Secondary mineralization pathways induced by dissimilatory iron reduction of ferrihydrite under advective flow. Geochim Cosmochim Acta 67 16 (2003) 2977-2992
9. Huber R.M., Sacher M., Vollmann A., Huber H., and Rose D. Respiration of arsenate and selenate by hyperthermophilic archaea. Syst Appl Microbiol 23 3 (2000) 305-314
10. Hungate R.E. A roll rube method for cultivation of strict anaerobes. In: Norris J.R., and Ribbons D.W. (Eds). Methods in Microbiology Vol 3B (1969), Academic Press, New York 117-132
11. Islam F.S., Gault A.G., Boothman C., Polya D.A., Charnock J.M., Chatterjee D., and Lloyd J.R. Role of metal-reducing bacteria in arsenic release from Bengal delta sediments. Nature 430 (2004) 68-71
12. Islam F.S., Pederick R.L., Gault A.G., Adams L.K., Polya D.A., Charnock J.M., and Lloyd J.R. Interactions between the Fe(III)-reducing bacterium Geobacter sulfurreducens and arsenate, and capture of the metalloid by biogenic Fe(II). Appl Environ Microbiol 71 12 (2005) 8642-8648
13. Kirk M.F., Holm T.R., Park J., Jin Q., Sanford R.A., Fouke B.W., and Bethke C.M. Bacterial sulfate reduction limits natural arsenic contamination in groundwater. Geology 32 11 (2004) 953-956
14. Maity S., Chakravarty S., Thakur P., Gupta K.K., Bhattacharjee S., and Roy B.C. Evaluation and standardisation of a simple HG-AAS method for rapid speciation of As(III) and As(V) in some contaminated groundwater samples of West Bengal, India. Chemosphere 54 (2004) 1199-1206
15. Mukhopadhyay R., Rosen B.P., Phung L.T., and Silver S. Microbial arsenic: from geocycles to genes and enzymes. FEMS Microbiol Rev 26 (2002) 311-325
16. Newman D.K., Deveridge T.J., and Morel F.M.M. Precipitation of arsenic trisulfide by Desulfotomaculum auripigmentum. Appl Environ Microbiol 63 5 (1997) 2022-2028
17. Newman D.K., Kennedy E.K., Coates J.D., Ahmann D., Ellis D.J., Lovley D.R., and Morel F.M.M. Dissimilatory arsenate and sulfate reduction in Desulfotomaculum auripigmentum sp. nov. Arch Microbiol 168 (1997) 380-388
18. Oremland R.S., and Stolz J.F. The ecology of arsenic. Science 300 (2003) 939-944
19. Quináia S.P., and Rollemberg M. Selective reduction of arsenic species by hydride generation - atomic absorption spectrometry. Part 2: sample storage and arsenic determination in natural waters. J Braz Chem Soc 12 1 (2001) 37-41
20. Raven K.P., Jain A., and Loeppert R.H. Arsenite and arsenate adsorption on ferrihydrite: kinetics, equilibrium, and adsorption envelopes. Environ Sci Technol 32 (1998) 344-349
21. Schwertmann U., and Cornell R.M. In Iron Oxides in the Laboratory: Preparation and Characterization (1991), Wiley-VCH, New York
22. Smedley P.L., and Kinniburgh D.G. A review of the source, behaviour and distribution of arsenic in natural waters. Appl Geochem 17 (2002) 517-568
23. Sracek O., Bhattacharya P., Jacks G., Gustafsson J.P., and von Brömssen. Behavior of arsenic and geochemical modeling of arsenic enrichment in aqueous environments. Appl Geochem 19 (2004) 169-180
24. Stolz J.F., and Oremland R.S. Bacterial respiration of arsenic and selenium. FEMS Microbiol Rev 23 5 (1999) 615-627
25. USEPA (U.S. Environmental Protection Agency) Quináia. National primary drinking water regulations: arsenic and clarifications to compliance and new source contaminants monitoring. Federal Register 66 (2001) 6975-7066
26. WHO (World Health Organizatin). Guidelines for Drinking-Water Quality. Recommendations. 2nd ed. Volume 1 (1993), WHO, Geneva
27. Zachara J.M., Kukkadapu R.K., Fredrickson J.K., Gorby Y.A., and Smith S.C. Biomineralization of poorly crystalline Fe(III) oxides by dissimilatory metal reducing bacteria (DMRB). Geomicrobiol J 19 2 (2002) 179-207
28. Zobrist J., Dowdle P.R., Davis J.A., and Oremland R.S. Mobilization of arsenite by dissimilatory reduction of adsorbed arsenate. Environ Sci Technol 34 (2000) 4747-4753