-
1
-
-
33745259286
-
Protein secondary structure prediction for a single sequence using hidden semi-Markov models
-
Z. Aydin, Y. Altunbasak, and M. Borodovsky, "Protein secondary structure prediction for a single sequence using hidden semi-Markov models," BMC Bioinformatics, vol. 7, no. 178, 2006.
-
(2006)
BMC Bioinformatics
, vol.7
, Issue.178
-
-
Aydin, Z.1
Altunbasak, Y.2
Borodovsky, M.3
-
2
-
-
0019887799
-
Identification of common molecular subsequences
-
T. Smith and M. Waterman, "Identification of common molecular subsequences," J. Mol. Biol., vol. 147, pp. 195-197.
-
J. Mol. Biol
, vol.147
, pp. 195-197
-
-
Smith, T.1
Waterman, M.2
-
3
-
-
0025183708
-
A basic local alignment search tool
-
S. F. Altschul, W. Gish, W. Miller, E. Y. Myers, and D. J. Lipman, "A basic local alignment search tool," J. Mol. Biol., vol. 215, pp. 403-410.
-
J. Mol. Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.Y.4
Lipman, D.J.5
-
4
-
-
0025272240
-
Rapid and sensitive sequence comparisons with FASTP and FASTA
-
W. R. Pearson, "Rapid and sensitive sequence comparisons with FASTP and FASTA," Methods in Enzymology, vol. 183, pp. 63-98.
-
Methods in Enzymology
, vol.183
, pp. 63-98
-
-
Pearson, W.R.1
-
5
-
-
0023375315
-
Profile analysis: Detection of distantly related proteins
-
M. Gribskov, A. McLachlan, and D. Eisenberg, "Profile analysis: Detection of distantly related proteins," P.N.A.S., USA, vol. 84, pp. 4355-4358.
-
P.N.A.S., USA
, vol.84
, pp. 4355-4358
-
-
Gribskov, M.1
McLachlan, A.2
Eisenberg, D.3
-
6
-
-
0028181441
-
Hidden Markov models in computational biology: Applications to protein modeling
-
A. Krogh, M. Brown, I. S. Mian, K. Sjolander, and D. Haussler, "Hidden Markov models in computational biology: Applications to protein modeling," J. Mol. Biol., vol. 235, pp. 1501-1531.
-
J. Mol. Biol
, vol.235
, pp. 1501-1531
-
-
Krogh, A.1
Brown, M.2
Mian, I.S.3
Sjolander, K.4
Haussler, D.5
-
7
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
S. F. Altschul, T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman, "Gapped BLAST and PSI-BLAST: A new generation of protein database search programs," Nucleic Acids Research, vol. 25, pp. 3389-3402.
-
Nucleic Acids Research
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
8
-
-
0032438987
-
Hidden Markov models for detecting remote homologies
-
K. Karplus, C. Barrett, and R. Hugley, "Hidden Markov models for detecting remote homologies," Bioinformatics, vol. 14, pp. 846-856.
-
Bioinformatics
, vol.14
, pp. 846-856
-
-
Karplus, K.1
Barrett, C.2
Hugley, R.3
-
9
-
-
0030931336
-
Seventy-five percent accuracy in protein secondary structure prediction
-
D Frishman and P Argos, "Seventy-five percent accuracy in protein secondary structure prediction," Proteins, vol. 27, pp. 329-335, 1997.
-
(1997)
Proteins
, vol.27
, pp. 329-335
-
-
Frishman, D.1
Argos, P.2
-
11
-
-
0028961335
-
SCOP: A structural classification of proteins database for the investigation of sequences and structures
-
A G Murzin, S E Brenner, T Hubbard, and C Chothia, "SCOP: a structural classification of proteins database for the investigation of sequences and structures," J. Mol. Biol., vol. 247, pp. 536-540, 1995.
-
(1995)
J. Mol. Biol
, vol.247
, pp. 536-540
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
-
12
-
-
0026458378
-
Amino acid substitution matrices from protein blocks
-
S. Henikoff and J.G. Henikoff, "Amino acid substitution matrices from protein blocks," P.N.A.S. USA, vol. 89, pp. 10915-10919, 1992.
-
(1992)
P.N.A.S. USA
, vol.89
, pp. 10915-10919
-
-
Henikoff, S.1
Henikoff, J.G.2
-
13
-
-
0034518144
-
Iterative sequence/secondary structure search for protein homologs: Comparison with amino acid sequence alignments and application to fold recognition in genome databases
-
A. Wallqvist, Y. Fukunushi, L. R. Murphy, A. Fadel, and R. M. Levy, "Iterative sequence/secondary structure search for protein homologs: comparison with amino acid sequence alignments and application to fold recognition in genome databases," Bioinformatics, vol. 16, no. 11, pp. 988-1002, 2000.
-
(2000)
Bioinformatics
, vol.16
, Issue.11
, pp. 988-1002
-
-
Wallqvist, A.1
Fukunushi, Y.2
Murphy, L.R.3
Fadel, A.4
Levy, R.M.5
-
14
-
-
0003516147
-
-
Cambridge University Press
-
R. Durbin, S. Eddy, A. Krogh, and G. Mitchison, Biological Sequence Analysis: Probabilistic models of proteins and nucleic acids, Cambridge University Press, 1981.
-
(1981)
Biological Sequence Analysis: Probabilistic models of proteins and nucleic acids
-
-
Durbin, R.1
Eddy, S.2
Krogh, A.3
Mitchison, G.4
-
15
-
-
0017868338
-
Empirical predictions of protein conformation
-
P. Chou and G. Fasman, "Empirical predictions of protein conformation," Annu. Rev. Biochem., vol. 47, pp. 251-276, 1978.
-
(1978)
Annu. Rev. Biochem
, vol.47
, pp. 251-276
-
-
Chou, P.1
Fasman, G.2
-
16
-
-
38049053133
-
Eva: Secondary structure (intro)
-
"Eva: secondary structure (intro):," http://cubic.bioc. columbia.edu/eva/doc/intro_sec.html.
-
-
-
-
17
-
-
84870649266
-
The protein data bank
-
"The protein data bank," http://www.rcsb.org/pdb.
-
-
-
|