Characterization of sulfate-reducing bacteria dominated surface communities during start-up of a down-flow fluidized bed reactor

Journal of Industrial Microbiology and Biotechnology

Volumn 36, Issue 1, 2009, Pages 111-121

  Celis, Lourdes B ^a   Villa Gómez, Denys ^a   Alpuche Solís, Angel G ^a   Ortega Morales, B Otto ^b   Razo Flores, Elías ^a  

^a INSTITUTO POTOSINO DE INVESTIGACIÓN CIENTÍFICA Y TECNOLÓGICA   (Mexico)

^b UNIVERSIDAD AUTÓNOMA DE CAMPECHE   (Mexico)

Author keywords

16S rDNA; Anaerobic activity; Biofilm; Fluidized bed reactor; Sulfate reduction

Indexed keywords

ACETIC ACID; ALCOHOL; DNA 16S; LACTIC ACID; POLYETHYLENE; SULFATE; SULFIDE;

ARTICLE; BACTERIUM IDENTIFICATION; BATCH REACTOR; BIOFILM; CHEMICAL ANALYSIS; CHEMICAL OXYGEN DEMAND; DESULFOVIBRIO; DNA SEQUENCE; ELECTRON MICROSCOPY; FLUIDIZED BED REACTOR; GENE SEQUENCE; INOCULATION; METHANOBACTERIUM; MICROBIAL COMMUNITY; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; SLUDGE; SULFATE REDUCING BACTERIUM; SURFACE PROPERTY; WASTE WATER;

BACTERIA; BIOREACTORS; CULTURE TECHNIQUES; DNA, BACTERIAL; DNA, RIBOSOMAL; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEWAGE; SULFATES;

DESULFOVIBRIO; METHANOBACTERIUM;

EID: 57649179726     PISSN: 13675435     EISSN: 14765535     Source Type: Journal    
DOI: 10.1007/s10295-008-0478-7     Document Type: Article

References (36)

1. N Acuña BO Ortega-Morales A Valadez-González 2006 Biofilm colonization dynamics and its influence on the corrosion resistance of austenitic UNSS31603 stainless steel exposed to Gulf of Mexico seawater Mar Biotechnol 8 62 70 10.1007/s10126-005-5145-7
2. SF Altschul W Gish W Miller EW Meyers DJ Lipman 1990 Basic local alignment search tool J Mol Biol 215 403 410
3. MT Alvarez T Pozzo B Mattiasson 2006 Enhancement of sulphate production in anaerobic packed bed bench-scale biofilm reactors by sulphate reducing bacteria Biotechnol Lett 28 175 181 10.1007/s10529-005-5332-7
4. CF Alves LF Melo MJ Vieira 2002 Influence of medium composition on the characteristics of a denitrifying biofilm formed by Alcaligenes denitrificans in a fluidised bed reactor Process Biochem 37 837 845 10.1016/S0032-9592(01)00282- 5
5. RI Amann W Ludwig K-H Schleifer 1995 Phylogenetic identification and in situ detection of individual microbial cells without cultivation Microbiol Rev 59 143 169
6. APHA (1998) Standard methods for the examination of water and wastewater. American Public Health Association, Washington DC
7. SM Barns RE Fundyga MW Jeffries NR Pace 1994 Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment Proc Natl Acad Sci USA 91 1609 1613 10.1073/pnas.91.5.1609
8. HC Birnboim J Doly 1979 A rapid alkaline extraction procedure for screening recombinant plasmid DNA Nucleic Acids Res 7 1513 1523 10.1093/nar/7.6.1513
9. PL Bond SP Smriga JF Bandfield 2000 Phylogeny of microorganisms populating a thick, subaerial, predominantly lithotrophic biofilm at an extreme acid mine drainage site Appl Environ Microbiol 66 3842 3849 10.1128/AEM.66.9. 3842-3849.2000
10. N Boonapatcharoen K Meepian P Chaiprasert S Techkarnjanaruk 2007 Molecular monitoring of microbial population dynamics during operational periods of anaerobic hybrid reactor treating Cassava starch wastewater Microb Ecol 54 21 30 10.1007/s00248-006-9161-6
11. AM Briones BJ Daugherty LT Angement KD Rausch ME Tumbleson L Raskin 2007 Microbial diversity and dynamics in multi-and single-compartment anaerobic bioreactors processing sulfate-rich waste streams Environ Microbiol 9 93 106 10.1111/j.1462-2920.2006.01119.x
12. P Buffière JP Bergeon R Moletta 2000 The inverse turbulent bed: a novel bioreactor for anaerobic treatment Water Res 34 673 677 10.1016/S0043-1354(99)00166-9
13. Bryers JD (2000) Process engineering. In: Bryers JD (ed) Biofilms II: process analysis and applications. Wiley-Liss, New York, pp 13-44
14. LB Celis-García G González-Blanco M Meraz 2008 Removal of sulfur inorganic compounds by a biofilm of sulfate reducing and sulfide oxidizing bacteria in a down-flow fluidized bed reactor J Chem Technol Biotechnol 83 260 268 10.1002/jctb.1802
15. R Cord-Ruwisch 1985 A quick method for the determination of dissolved and precipitated sulfides in cultures of sulfate-reducing bacteria J Microbiol Methods 4 33 36 10.1016/0167-7012(85)90005-3
16. Devereux R, Stahl DA (1993) Phylogeny of sulfate-reducing bacteria and a perspective for analyzing their natural communities. In: Odom JM, Singleton RJ (eds) The sulfate-reducing bacteria: contemporary perspectives. Springer, New York, pp 131-160
17. Flemming HC, Wingender J, Moritz R, Brochard W, Mayer C (1999) Physico-chemical properties of biofilms-a short review. In: Keevil CW, Godfree A, Holt D, Dow C (eds) Biofilms in the aquatic environment. Royal Society of Chemistry, London, pp 1-12
18. SA Freeman R Sierra-Alvarez M Altinbas J Hollingsworth AJM Stams H Smidt 2008 Molecular characterization of mesophilic and thermophilic sulfate reducing microbial communities in expanded granular sludge bed (EGSB) reactors Biodegradation 19 161 177 10.1007/s10532-007-9123-9
19. AH Kaksonen ML Riekkola-Vanhanen JA Puhakka 2003 Optimization of metal sulphide precipitation in fluidized-bed treatment of acidic wastewater Water Res 37 255 266 10.1016/S0043-1354(02)00267-1
20. AH Kaksonen JJ Plumb PD Franzmann JA Puhakka 2004 Simple organic electron donors support diverse sulfate-reducing communities in fluidized-bed reactors treating acidic metal- and sulfate-containing wastewater FEMS Microbiol Ecol 47 279 289 10.1016/S0168-6496(03)00284-8
21. WK Kwok C Picioreanu SL Ong MCM van Loosdrecht WJ Ng JJ Heijnen 1998 Influence of biomass production and detachment forces on biofilm structures in a biofilm airlift suspension reactor Biotechnol Bioeng 58 400 407 10.1002/(SICI)1097-0290(19980520)58:4<400::AID-BIT7>3.0.CO;2-N
22. V Lazarova V Pierzo D Fontvielle J Manem 1994 Integrated approach for biofilm characterisation and biomass activity control Water Sci Technol 29 7 345 354
23. O Lefebvre N Vasudevan K Thanasekaran R Moletta JJ Godon 2006 Microbial diversity in hypersaline wastewater: the example of tanneries Extremophiles 10 505 513 10.1007/s00792-006-0524-1
24. PNL Lens MC Van Den Bosch LW Hulshoff Pol G Lettinga 1998 Effect of staging on volatile fatty acid degradation in a sulfidogenic granular sludge reactor Water Res 32 1178 1192 10.1016/S0043-1354(97)00323-0
25. H Liu L Huang Z Huang J Zheng 2007 Specification of sulfate reducing bacteria biofilms accumulation effects on corrosion initiation Mater Corros 58 44 48 10.1002/maco.200603984
26. M Meraz O Monroy A Noyola K Ilangovan 1995 Studies on the dynamics of immobilization of anaerobic bacteria on a plastic support Water Sci Technol 32 8 243 250 10.1016/0273-1223(96)00032-7
27. S Nagpal S Chuichulcherm L Peeva A Livingston 2000 Microbial sulfate reduction in a liquid-solid fluidized bed reactor Biotechnol Bioeng 70 370 380 10.1002/1097-0290(20001120)70:4<370::AID-BIT2>3.0.CO;2-7
28. A Ohashi H Harada 1994 Adhesion strength of biofilm developed in an attached-growth reactor Water Sci Technol 29 (10-11) 281 288
29. SJWH Oude Elferink WJC Vorstman A Sopjes AJM Stams 1998 Characterization of the sulfate-reducing and syntrophic population in granular sludge from a full-scale anaerobic reactor treating papermill wastewater FEMS Microbiol Ecol 27 185 194 10.1111/j.1574-6941.1998.tb00536.x
30. AJ Silva JS Hirasawa MB Varesche E Foresti M Zaiat 2006 Evaluation of support materials for the immobilization of sulfate-reducing bacteria and methanogenic archaea Anaerobe 12 93 98 10.1016/j.anaerobe.2005.12.003
31. WAJ van Benthum JM Garrido-Fernández L Tijhuis MCM van Loosdrecht JJ Heijnen 1996 Formation and detachment of biofilms and granules in a nitrifying biofilm airlift suspension reactor Biotechnol Prog 12 764 772 10.1021/bp960063e
32. A Visser I Beeksma F van der Zee AJM Stams G Lettinga 1993 Anaerobic degradation of volatile fatty acids at different sulphate concentrations Appl Microbiol Biotechnol 40 549 556
33. Widdel F (1988) Microbiology and ecology of sulfate- and sulfur-reducing bacteria. In: Zehnder AJB (ed) Biology of anaerobic organisms. Wiley, New York, pp 469-586
34. JD Wisotzkey PJ Jurtshuk GE Fox 1990 PCR amplification of 16S rDNA from lyophilized cell cultures facilitates studies in molecular systematics Curr Microbiol 21 325 327 10.1007/BF02092099
35. Q Xu X Wen X Deng 2004 A simple protocol for isolating genomic DNA from chestnut rose (Rosa roxburghii Tratt) for RFP and PCR analyses Plant Mol Biol Rep 22 301a 301g 10.1007/BF02773140
36. AJB Zehnder BA Huser TD Brock K Wuhrmann 1980 Characterization of an acetate-decarboxylating, non-hydrogen oxidizing methane bacterium Arch Microbiol 124 1 11 10.1007/BF00407022