-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul S, Madden T, Schaffer A, Zhang J, Zhang Z, Miller W, Lipman D (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389-3402
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.1
Madden, T.2
Schaffer, A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.7
-
2
-
-
0033301308
-
Fluorescence in situ hybridization analysis of the prokaryotic community inhabiting crystallizer ponds
-
Anton J, Llobet-Brossa E, Rodriguez-Valera F, Amann R (1999) Fluorescence in situ hybridization analysis of the prokaryotic community inhabiting crystallizer ponds. Environ Microbiol 1:517-523
-
(1999)
Environ Microbiol
, vol.1
, pp. 517-523
-
-
Anton, J.1
Llobet-Brossa, E.2
Rodriguez-Valera, F.3
Amann, R.4
-
4
-
-
0030062396
-
Sequencing of bacterial and archaeal 16S rRNA genes directly amplified from a hypersaline environment
-
Benlloch S, Martinez-Murcia AJ, Rodriguez-Valera F (1995) Sequencing of bacterial and archaeal 16S rRNA genes directly amplified from a hypersaline environment. Syst Appl Microbiol 18:574-581
-
(1995)
Syst Appl Microbiol
, vol.18
, pp. 574-581
-
-
Benlloch, S.1
Martinez-Murcia, A.J.2
Rodriguez-Valera, F.3
-
5
-
-
0035984127
-
Prokaryotic genetic diversity throughout the salinity gradient of a coastal solar saltern
-
Benlloch S, Lopez-Lopez A, Casamayor EO, Ovreas L, Goddard V, Daae FL, Smerdon G, Massana R, Joint I, Thingstad F, Pedros-Alio C, Rodriguez-Valera F (2002) Prokaryotic genetic diversity throughout the salinity gradient of a coastal solar saltern. Environ Microbiol 4:349-360
-
(2002)
Environ Microbiol
, vol.4
, pp. 349-360
-
-
Benlloch, S.1
Lopez-Lopez, A.2
Casamayor, E.O.3
Ovreas, L.4
Goddard, V.5
Daae, F.L.6
Smerdon, G.7
Massana, R.8
Joint, I.9
Thingstad, F.10
Pedros-Alio, C.11
Rodriguez-Valera, F.12
-
6
-
-
0029025721
-
Bacterial community structures of phosphate-removing and non-phosphate-removing activated sludges from sequencing batch reactors
-
Bond PL, Hugenholtz P, Keller J, Blackall LL (1995) Bacterial community structures of phosphate-removing and non-phosphate-removing activated sludges from sequencing batch reactors. Appl Environ Microbiol 61:1910-1916
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 1910-1916
-
-
Bond, P.L.1
Hugenholtz, P.2
Keller, J.3
Blackall, L.L.4
-
7
-
-
0019513663
-
Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli
-
Brosius J, Dull TJ, Sleeter DD, Noller HF (1981) Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J Mol Biol 148:107-127
-
(1981)
J Mol Biol
, vol.148
, pp. 107-127
-
-
Brosius, J.1
Dull, T.J.2
Sleeter, D.D.3
Noller, H.F.4
-
8
-
-
0034387298
-
Estimating the number of shared species in two communities
-
Chao A, Hwang WH, Chen YC, Kuo CY (2000) Estimating the number of shared species in two communities. Stat Sin 10:227-246
-
(2000)
Stat Sin
, vol.10
, pp. 227-246
-
-
Chao, A.1
Hwang, W.H.2
Chen, Y.C.3
Kuo, C.Y.4
-
9
-
-
0003143985
-
Statistical methods for estimating species richness of woody regeneration in primary and secondary rain forests of NE Costa Rica
-
Dallmeier F, Comiskey JA (eds) Parthenon Publishing, Paris
-
Chazdon RL, Colwell RK, Denslow JS, Guariguata MR (1998) Statistical methods for estimating species richness of woody regeneration in primary and secondary rain forests of NE Costa Rica. In: Dallmeier F, Comiskey JA (eds) Forest biodiversity research, monitoring and modeling: conceptual background and Old World case studies. Parthenon Publishing, Paris, pp 285-309
-
(1998)
Forest Biodiversity Research, Monitoring and Modeling: Conceptual Background and Old World Case Studies
, pp. 285-309
-
-
Chazdon, R.L.1
Colwell, R.K.2
Denslow, J.S.3
Guariguata, M.R.4
-
10
-
-
0037251969
-
The ribosomal database project (RDP-II): Previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
-
Cole JR, Chai B, Marsh TL, Farris RJ, Wang Q, Kulam SA, Chandra S, McGarrell DM, Schmidt TM, Garrity GM et al (2003) The ribosomal database project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Res 31:442-443
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 442-443
-
-
Cole, J.R.1
Chai, B.2
Marsh, T.L.3
Farris, R.J.4
Wang, Q.5
Kulam, S.A.6
Chandra, S.7
McGarrell, D.M.8
Schmidt, T.M.9
Garrity, G.M.10
-
13
-
-
0037188527
-
Benthic eukaryotic diversity in the Guaymas Basin hydrothermal vent environment
-
Edgcomb VP, Kysela DT, Teske A, de Vera Gomez A, Sogin ML (2002) Benthic eukaryotic diversity in the Guaymas Basin hydrothermal vent environment. Proc Natl Acad Sci USA 99:7658-7662
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 7658-7662
-
-
Edgcomb, V.P.1
Kysela, D.T.2
Teske, A.3
De Vera Gomez, A.4
Sogin, M.L.5
-
14
-
-
0030700311
-
Microbial 16S rDNA diversity in an anaerobic digester
-
Godon JJ, Zumstein E, Dabert P, Habouzit F, Moletta R (1997a) Microbial 16S rDNA diversity in an anaerobic digester. Water Sci Technol 36:49-55
-
(1997)
Water Sci Technol
, vol.36
, pp. 49-55
-
-
Godon, J.J.1
Zumstein, E.2
Dabert, P.3
Habouzit, F.4
Moletta, R.5
-
15
-
-
0030872620
-
Molecular microbial diversity of an anaerobic digestor as determined by small-subunit rDNA sequence analysis
-
Godon JJ, Zumstein E, Dabert P, Habouzit F, Moletta R (1997b) Molecular microbial diversity of an anaerobic digestor as determined by small-subunit rDNA sequence analysis. Appl Environ Microbiol 63:2802-22813
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 2802-22813
-
-
Godon, J.J.1
Zumstein, E.2
Dabert, P.3
Habouzit, F.4
Moletta, R.5
-
16
-
-
33751093844
-
Comparison of 16S ribosomal DNA structure of ten anaerobic digestors
-
Final programm abstracts, Cancun, Mexico
-
Godon JJ, Bayle S, Leclerc M, Delgenes JP (2004) Comparison of 16S ribosomal DNA structure of ten anaerobic digestors. In: Final programm abstracts, 10th Int Symp Microb Ecol. Cancun, Mexico, p 176
-
(2004)
10th Int Symp Microb Ecol
, pp. 176
-
-
Godon, J.J.1
Bayle, S.2
Leclerc, M.3
Delgenes, J.P.4
-
17
-
-
0000803388
-
The population frequencies of species and the estimation of population parameters
-
Good IL (1953) The population frequencies of species and the estimation of population parameters. Biometrika 40:237-264
-
(1953)
Biometrika
, vol.40
, pp. 237-264
-
-
Good, I.L.1
-
18
-
-
0035894937
-
Stratification of microbial assemblages in Mono Lake, California, and response to a mixing event
-
Hollibaugh JT, Wong PS, Bano N, Pak SK, Prager EM, Orrego C (2001) Stratification of microbial assemblages in Mono Lake, California, and response to a mixing event. Hydrobiologia 466:45-60
-
(2001)
Hydrobiologia
, vol.466
, pp. 45-60
-
-
Hollibaugh, J.T.1
Wong, P.S.2
Bano, N.3
Pak, S.K.4
Prager, E.M.5
Orrego, C.6
-
19
-
-
0037315929
-
Depth distribution of microbial diversity in Mono Lake, a meromictic soda lake in California
-
Humayoun SB, Bano N, Hollibaugh JT (2003) Depth distribution of microbial diversity in Mono Lake, a meromictic soda lake in California. Appl Environ Microbiol 69:1030-1042
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 1030-1042
-
-
Humayoun, S.B.1
Bano, N.2
Hollibaugh, J.T.3
-
20
-
-
24944535118
-
Industrial enzymes: Do halophiles and alkaliphiles have a role to play?
-
Ventosa A (ed) Springer, Berlin Heidelberg New York
-
Jones BE (2004) Industrial enzymes: do halophiles and alkaliphiles have a role to play? In: Ventosa A (ed) Halophilic microorganisms. Springer, Berlin Heidelberg New York, pp 275-284
-
(2004)
Halophilic Microorganisms
, pp. 275-284
-
-
Jones, B.E.1
-
21
-
-
3242805900
-
Treatment of hypersaline industrial wastewater by a microbial consortium in a sequencing batch reactor
-
Lefebvre O, Habouzit F, Bru V, Delgenes JP, Godon JJ, Moletta R (2004) Treatment of hypersaline industrial wastewater by a microbial consortium in a sequencing batch reactor. Environ Technol 25:543-553
-
(2004)
Environ Technol
, vol.25
, pp. 543-553
-
-
Lefebvre, O.1
Habouzit, F.2
Bru, V.3
Delgenes, J.P.4
Godon, J.J.5
Moletta, R.6
-
22
-
-
18244382053
-
Halophilic biological treatment of tannery soak liquor in a sequencing batch reactor
-
Lefebvre O, Vasudevan N, Torrijos M, Thanasekaran K, Moletta R (2005) Halophilic biological treatment of tannery soak liquor in a sequencing batch reactor. Water Res 39:1471-1480
-
(2005)
Water Res
, vol.39
, pp. 1471-1480
-
-
Lefebvre, O.1
Vasudevan, N.2
Torrijos, M.3
Thanasekaran, K.4
Moletta, R.5
-
23
-
-
33645151942
-
Anaerobic digestion of tannery soak liquor with an aerobic post-treatment
-
Lefebvre O, Vasudevan N, Torrijos M, Thanasekaran K, Moletta R (2006) Anaerobic digestion of tannery soak liquor with an aerobic post-treatment. Water Res 40:1492-1500
-
(2006)
Water Res
, vol.40
, pp. 1492-1500
-
-
Lefebvre, O.1
Vasudevan, N.2
Torrijos, M.3
Thanasekaran, K.4
Moletta, R.5
-
24
-
-
33751073491
-
Microbial molecular and physiological diversity in hypersaline environments
-
Ventosa A (ed) Springer, Berlin Heidelberg New York
-
Litchfield CD (2004) Microbial molecular and physiological diversity in hypersaline environments. In: Ventosa A (ed) Halophilic microorganisms. Springer, Berlin Heidelberg New York, pp 49-61
-
(2004)
Halophilic Microorganisms
, pp. 49-61
-
-
Litchfield, C.D.1
-
25
-
-
0036163083
-
Microbial diversity and complexity in hypersaline environments: A preliminary assessment
-
Litchfield CD, Gillevet PM (2002) Microbial diversity and complexity in hypersaline environments: a preliminary assessment. J Ind Microbiol Biotechnol 28:48-55
-
(2002)
J Ind Microbiol Biotechnol
, vol.28
, pp. 48-55
-
-
Litchfield, C.D.1
Gillevet, P.M.2
-
26
-
-
2542523843
-
ARB: A software environment for sequence data
-
Ludwig W, Strunk O, Westram R, Richter L, Meier H, Yadhukumar, Buchner A, Lai T, Steppi S, Jobb G, Forster W et al (2004) ARB: a software environment for sequence data. Nucleic Acids Res 32:1363-1371
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
Strunk, O.2
Westram, R.3
Richter, L.4
Meier, H.5
Yadhukumar6
Buchner, A.7
Lai, T.8
Steppi, S.9
Jobb, G.10
Forster, W.11
-
27
-
-
0028981814
-
Evaluation of prokaryotic diversity by restrictase digestion of 16S rDNA directly amplified from hypersaline environments
-
Martinez-Murcia AJ, Acinas SG, Rodriguez-Valera F (1995) Evaluation of prokaryotic diversity by restrictase digestion of 16S rDNA directly amplified from hypersaline environments. FEMS Microbiol Ecol 17:247-255
-
(1995)
FEMS Microbiol Ecol
, vol.17
, pp. 247-255
-
-
Martinez-Murcia, A.J.1
Acinas, S.G.2
Rodriguez-Valera, F.3
-
28
-
-
0041380947
-
Molecular sequence analysis of prokaryotic diversity in the anoxic sediments underlying cyanobacterial mats of two hypersaline ponds in Mediterranean salterns
-
Mouné S, Caumette P, Matheron R, Willison JC (2003) Molecular sequence analysis of prokaryotic diversity in the anoxic sediments underlying cyanobacterial mats of two hypersaline ponds in Mediterranean salterns. FEMS Microbiol Ecol 44:117-130
-
(2003)
FEMS Microbiol Ecol
, vol.44
, pp. 117-130
-
-
Mouné, S.1
Caumette, P.2
Matheron, R.3
Willison, J.C.4
-
29
-
-
33645190721
-
Biotransformation of toxic organic and inorganic contaminants by halophilic bacteria
-
Ventosa A (ed) Springer, Berlin Heidelberg New York
-
Peyton BM, Mormile MR, Alva V, Oie C, Roberto F, Apel WA, Oren A (2004) Biotransformation of toxic organic and inorganic contaminants by halophilic bacteria. In: Ventosa A (ed) Halophilic microorganisms. Springer, Berlin Heidelberg New York, pp 315-331
-
(2004)
Halophilic Microorganisms
, pp. 315-331
-
-
Peyton, B.M.1
Mormile, M.R.2
Alva, V.3
Oie, C.4
Roberto, F.5
Apel, W.A.6
Oren, A.7
-
30
-
-
1942467749
-
Moderately halophilic, exopolysaccharide-producing bacteria
-
Ventosa A (ed) Springer, Berlin Heidelberg New York
-
Quesada E, Bejar V, Ferrer MR, Calvo C, Llamas I, Martinez-Checa F, Arias S, Ruiz-Garcia C, Paez R, Martinez-Canovas MJ, Del Moral A (2004) Moderately halophilic, exopolysaccharide-producing bacteria. In: Ventosa A (ed) Halophilic microorganisms. Springer, Berlin Heidelberg New York, pp 297-314
-
(2004)
Halophilic Microorganisms
, pp. 297-314
-
-
Quesada, E.1
Bejar, V.2
Ferrer, M.R.3
Calvo, C.4
Llamas, I.5
Martinez-Checa, F.6
Arias, S.7
Ruiz-Garcia, C.8
Paez, R.9
Martinez-Canovas, M.J.10
Del Moral, A.11
-
32
-
-
0002874646
-
Contribution of molecular techniques to the study of microbial diversity in hypersaline environments
-
Oren A (ed) CRC Press, Boca Raton
-
Rodríguez-Valera F, Acinas SG, Anton J (1999) Contribution of molecular techniques to the study of microbial diversity in hypersaline environments. In: Oren A (ed) Microbiology and biogeochemistry of hypersaline environments. CRC Press, Boca Raton, pp 27-38
-
(1999)
Microbiology and Biogeochemistry of Hypersaline Environments
, pp. 27-38
-
-
Rodríguez-Valera, F.1
Acinas, S.G.2
Anton, J.3
-
33
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
34
-
-
0031719182
-
Phylogenetic diversity of mesophilic and thermophilic granular sludges determined by 16S rRNA gene analysis
-
Sekiguchi Y, Kamagata Y, Syutsubo K, Ohashi A, Harada H, Nakamura K (1998) Phylogenetic diversity of mesophilic and thermophilic granular sludges determined by 16S rRNA gene analysis. Microbiology 144:2655-2665
-
(1998)
Microbiology
, vol.144
, pp. 2655-2665
-
-
Sekiguchi, Y.1
Kamagata, Y.2
Syutsubo, K.3
Ohashi, A.4
Harada, H.5
Nakamura, K.6
-
35
-
-
0030741576
-
Phylogenetic analysis and in situ identification of bacteria in activated sludge
-
Snaidr J, Amann R, Huber I, Ludwig W, Schleifer KH (1997) Phylogenetic analysis and in situ identification of bacteria in activated sludge. Appl Environ Microbiol 63:2884-2896
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 2884-2896
-
-
Snaidr, J.1
Amann, R.2
Huber, I.3
Ludwig, W.4
Schleifer, K.H.5
-
36
-
-
15244351941
-
Characterisation of the microbial diversity in a pig manure storage pit using small subunit rDNA sequence analysis
-
Snell-Castro R, Godon J-J, Delgenes J-P, Dabert P (2005) Characterisation of the microbial diversity in a pig manure storage pit using small subunit rDNA sequence analysis. FEMS Microbiol Ecol 52:229-242
-
(2005)
FEMS Microbiol Ecol
, vol.52
, pp. 229-242
-
-
Snell-Castro, R.1
Godon, J.-J.2
Delgenes, J.-P.3
Dabert, P.4
-
37
-
-
23744435617
-
Haloalkaliphilic sulfur-oxidizing bacteria in soda lakes
-
Sorokin DY, Kuenen JG (2005) Haloalkaliphilic sulfur-oxidizing bacteria in soda lakes. FEMS Microbiol Rev 29:685-702
-
(2005)
FEMS Microbiol Rev
, vol.29
, pp. 685-702
-
-
Sorokin, D.Y.1
Kuenen, J.G.2
-
38
-
-
0037624500
-
Sustaining tanning process through conservation, recovery and better utilization of chromium
-
Sreeram KJ, Ramasami T (2003) Sustaining tanning process through conservation, recovery and better utilization of chromium. Resour Conserv Recycling 38:185-212
-
(2003)
Resour Conserv Recycling
, vol.38
, pp. 185-212
-
-
Sreeram, K.J.1
Ramasami, T.2
-
39
-
-
0037372150
-
Water management of production systems optimised by environmentally oriented integral chain management: Case study of leather manufacturing in developing countries
-
Stoop MLM (2003) Water management of production systems optimised by environmentally oriented integral chain management: case study of leather manufacturing in developing countries. Technovation 23:265-278
-
(2003)
Technovation
, vol.23
, pp. 265-278
-
-
Stoop, M.L.M.1
-
40
-
-
11144354360
-
Environmental genome shotgun sequencing of the Sargasso Sea
-
Venter JC, Remington K, Heidelberg JF, Halpern AL, Rusch D, Eisen JA, Wu DY, Paulsen I, Nelson KE, Nelson W, Fouts DE, Levy S, Knap AH, Lomas MW, Nealson K, White O, Peterson J, Hoffman J, Parsons R, Baden-Tillson H, Pfannkoch C, Rogers YH, Smith HO (2004) Environmental genome shotgun sequencing of the Sargasso Sea. Science 304:66-74
-
(2004)
Science
, vol.304
, pp. 66-74
-
-
Venter, J.C.1
Remington, K.2
Heidelberg, J.F.3
Halpern, A.L.4
Rusch, D.5
Eisen, J.A.6
Wu, D.Y.7
Paulsen, I.8
Nelson, K.E.9
Nelson, W.10
Fouts, D.E.11
Levy, S.12
Knap, A.H.13
Lomas, M.W.14
Nealson, K.15
White, O.16
Peterson, J.17
Hoffman, J.18
Parsons, R.19
Baden-Tillson, H.20
Pfannkoch, C.21
Rogers, Y.H.22
Smith, H.O.23
more..
-
41
-
-
0033916918
-
Analysis of ammonia-oxidizing bacteria from hypersaline Mono Lake, California, on the basis of 16S rRNA sequences
-
Ward BB, Martino DP, Diaz MC, Joye SB (2000) Analysis of ammonia-oxidizing bacteria from hypersaline Mono Lake, California, on the basis of 16S rRNA sequences. Appl Environ Microbiol 66:2873-2881
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 2873-2881
-
-
Ward, B.B.1
Martino, D.P.2
Diaz, M.C.3
Joye, S.B.4
|