Structure of the nucleotide-binding subunit B of the energy producer A 1A0 ATP synthase in complex with adenosine diphosphate

Acta Crystallographica Section D: Biological Crystallography

Volumn 64, Issue 11, 2008, Pages 1110-1115

  Kumar, Anil ^a   Manimekalai, Malathy Sony Subramanian ^a   Grüber, Gerhard ^a  

^a NANYANG TECHNOLOGICAL UNIVERSITY   (Singapore)

Author keywords

A1A0 ATP synthases; F1F0 ATP synthases; Methanosarcina mazei G 1; Vacuolar ATPases

Indexed keywords

A1A0 ATPASE, METHANOSARCINA MAZEI; ADENOSINE DIPHOSPHATE; ARCHAEAL PROTEIN; F1F0 ATP SYNTHASE; F1F0-ATP SYNTHASE; MUTANT PROTEIN; PROTEIN SUBUNIT; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATASE; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE;

ARTICLE; BINDING SITE; CHEMICAL STRUCTURE; CHEMISTRY; CRYSTALLIZATION; ENZYME SPECIFICITY; GENETICS; METABOLISM; METHANOSARCINA; PROTEIN BINDING; PROTEIN CONFORMATION; SITE DIRECTED MUTAGENESIS;

ADENOSINE DIPHOSPHATE; ARCHAEAL PROTEINS; BINDING SITES; CRYSTALLIZATION; METHANOSARCINA; MITOCHONDRIAL PROTON-TRANSLOCATING ATPASES; MODELS, MOLECULAR; MUTAGENESIS, SITE-DIRECTED; MUTANT PROTEINS; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN SUBUNITS; PROTON-TRANSLOCATING ATPASES; SUBSTRATE SPECIFICITY;

ARCHAEA; EUKARYOTA; METHANOSARCINA; METHANOSARCINA MAZEI GO1; PROKARYOTA;

EID: 56649122006     PISSN: 09074449     EISSN: 13990047     Source Type: Journal    
DOI: 10.1107/S090744490802790X     Document Type: Article

References (25)

1. Abrahams, J. P., Buchanan, S. K., van Raau, M. J., Fearnley, I. M., Leslie, A. G. & Walker, J. E. (1996). Proc. Natl Acad. Sci. USA, 93, 9420-9424.
2. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T. & Warren, G. L. (1998). Acta Cryst. D54, 905-921.
3. Coskun, Ü., Chaban, Y. L., Lingl, A., Müller, V., Keegstra, W., Boekema, E. J. & Grüber, G. (2004). J. Biol. Chem. 279, 38644-38648.
4. Coskun, Ü., Radermacher, M., Müller, V., Ruiz, T. & Grüber, G. (2004). J. Biol. Chem. 279, 22759-22764.
5. DeLano, W. L. (2002). The PyMol Molecular Graphics System. DeLano Scientific, Palo Alto, California, USA.
6. Emsley, P. & Cowtan, K. (2004). Acta Cryst. D60, 2126-2132.
7. Hassell, A. M. et al. (2007). Acta Cryst. D63, 72-79.
8. Hosaka, T., Murata, T., Kakinuma, Y. & Yamato, I. (2004). Biosci. Biotechnol. Biochem. 68, 293-299.
9. Inatomi, K.-I., Eya, S., Maeda, M. & Futai, M. (1989). J. Biol. Chem. 264, 10954-10959.
10. Kumar, A., Manimekalai, A. S. S., Balakrishna, A. M., Hunke, C., Weigelt, S., Sewald, N. & Grüber, G. (2008). In the press.
11. Laskowski, R. A., MacArthur, M. W., Moss, D. S. & Thornton, J. M. (1993). J. Appl. Cryst. 26, 283-291.
12. Maegawa, Y., Morita, H., Iyaguchi, D., Yao, M., Watanabe, N. & Tanaka, I. (2006). Acta Cryst. D62, 483-488.
13. Menz, I. R., Walker, J. E. & Leslie, A. G. W. (2001). Cell, 106, 331-341.
14. Müller, V. & Grüber, G. (2003). Cell. Mol. Life Sci. 60, 474-494.
15. Murata, T., Yoshikawa, Y., Hosaka, T., Takase, K., Kakinuma, Y., Yamato, I. & Kikuchi, T. (2002). J. Biochem. 132, 789-794.
16. Murshudov, G. N., Vagin, A. A. & Dodson, E. J. (1997). Acta Cryst. D53, 240-255.
17. Otwinowski, Z. & Minor, W. (1997). Methods Enzymol. 276, 307-326.
18. Saraste, M., Sibbald, P. R. & Wittinghofer, A. (1990). Trends Biol. Sci. 15, 430-434.
19. Schäfer, G., Engelhard, M. & Müller, V. (1999). Mol. Biol. Rev. 63, 570-620.
20. Schäfer, G. & Meyering-Vos, M. (1992). Biochim. Biophys. Acta, 1101, 232-235.
21. Schäfer, I., Bailer, S. M., Düser, M. G., Börsch, M., Ricardo, A. B., Stock, D. & Grüber, G. (2006). J. Mol. Biol. 358, 725-740.
22. Schäfer, I., Rössle, M., Biuković, G., Müller, V. & Grüber, G. (2006). J. Bioenerg. Biomembr. 38, 83-92.
23. Vagin, A. & Teplyakov, A. (1997). J. Appl. Cryst. 30, 1022-1025.
24. Vasilyeva, E. & Forgac, M. (1996). J. Biol. Chem. 271, 12775-12782.
25. Walker, J. E., Saraste, M., Runswick, M. J. & Gay, N. J. (1982). EMBO J. 1, 945-951.