Structure determination of the cancer-associated Mycoplasma hyorhinis protein Mh-p37

Acta Crystallographica Section D: Biological Crystallography

Volumn 64, Issue 11, 2008, Pages 1172-1178

  Sippel, Katherine H ^a   Robbins, Arthur H ^a   Reutzel, Robbie ^a,b   Domsic, John ^a   Boehlein, Susan K ^a   Govindasamy, Lakshmanan ^a   Agbandje Mckenna, Mavis ^a   Rosser, Charles J ^a   McKenna, Robert ^a  

^a UNIVERSITY OF FLORIDA   (United States)

^b BRANDEIS UNIVERSITY   (United States)

Author keywords

5 amino 2,4,6 triiodoisophthalic acid; Experimental phasing; Heavy atom derivatives; Mycoplasma hyorhinis; P37

Indexed keywords

5 AMINO 2,4,6 TRIIODOISOPHTHALIC ACID; 5-AMINO-2,4,6-TRIIODOISOPHTHALIC ACID; COCARBOXYLASE; IODOBENZOIC ACID DERIVATIVE; OUTER MEMBRANE PROTEIN; RECOMBINANT PROTEIN; TRANSFERRIN;

ANIMAL; ARTICLE; BINDING SITE; CHEMISTRY; CRYSTALLIZATION; GENE DELETION; GENETICS; HUMAN; METABOLISM; METHODOLOGY; MOLECULAR CLONING; MYCOPLASMA HYORHINIS; NEOPLASM; PATHOLOGY; PROTEIN BINDING; PROTEIN SECONDARY STRUCTURE; STRUCTURAL HOMOLOGY; X RAY CRYSTALLOGRAPHY;

ANIMALS; BACTERIAL OUTER MEMBRANE PROTEINS; BINDING SITES; CLONING, MOLECULAR; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; HUMANS; MYCOPLASMA HYORHINIS; NEOPLASMS; PROTEIN BINDING; PROTEIN STRUCTURE, SECONDARY; RECOMBINANT PROTEINS; SEQUENCE DELETION; STRUCTURAL HOMOLOGY, PROTEIN; THIAMINE PYROPHOSPHATE; TRANSFERRIN; TRIIODOBENZOIC ACIDS;

MYCOPLASMA HYORHINIS; MYCOPLASMATALES;

EID: 56649099167     PISSN: 09074449     EISSN: 13990047     Source Type: Journal    
DOI: 10.1107/S0907444908030175     Document Type: Article

References (29)

1. Adams, P. D., Grosse-Kunstleve, R. W., Hung, L.-W., Ioerger, T. R., McCoy, A. J., Moriarty, N. W., Read, R. J., Sacchettini, J. C., Sauter, N. K. & Terwilliger, T. C. (2002). Acta Cryst. D58, 1948-1954.
2. Baker, H. M., Mason, A. B., He, Q. Y., MacGillivray, R. T. & Baker, E. N. (2001). Biochemistry, 40, 11670-11675.
3. Beck, T. & Sheldrick, G. M. (2008a). Acta Cryst. E64, o1286.
4. Beck, T. & Sheldrick, G. M. (2008b). American Crystallographic Association Annual Meeting, Knoxville, TN, USA. Abstract SP056.
5. Beck, T., Krasauskas, A., Gruene, T. & Sheldrick, G. M. (2008). Acta Cryst. D64, 1179-1182.
6. Bernstein, F. C., Koetzle, T. F., Williams, G. J., Meyer, E. F. Jr, Brice, M. D., Rodgers, J. R., Kennard, O., Shimanouchi, T. & Tasumi, M. (1977). J. Mol. Biol. 112, 535-542.
7. Bond, C. S. (2003). Bioinformatics, 19, 311-312.
8. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T. & Warren, G. L. (1998). Acta Cryst. D54, 905-921.
9. Collaborative Computational Project, Number 4 (1994). Acta Cryst. D50, 760-763.
10. Dauter, Z., Dauter, M. & Rajashankar, K. R. (2000). Acta Cryst. D56, 232-237.
11. DeLano, W. L. (2002). The PyMOL Molecular Graphics System. http://www.pymol.org.
12. Dudler, R., Schmidhauser, C., Parish, R. W., Wettenhall, R. E. & Schmidt, T. (1988). EMBO J. 7, 3963-3970.
13. Emsley, P. & Cowtan, K. (2004). Acta Cryst. D60, 2126-2132.
14. Fareed, G. C., Mendiaz, E., Sen, A., Juillard, G. J., Weisenburger, T. H. & Totanes, T. (1988). J. Biol. Response Mod. 7, 11-23.
15. Gilson, E., Alloing, G., Schmidt, T., Claverys, J. P., Dudler, R. & Hofnung, M. (1988). EMBO J. 7, 3971-3974.
16. Gong, M., Meng, L., Jiang, B., Zhang, J., Yang, H., Wu, J. & Shou, C. (2008). Mol. Cancer Ther. 7, 530-537.
17. Hendrickson, W. A. & Ogata, C. M. (1997). Methods Enzymol. 276, 494-523.
18. Holm, L. & Sander, C. (1996). Methods Enzymol. 266, 653-662.
19. Huang, S., Li, J. Y., Wu, J., Meng, L. & Shou, C. C. (2001). World J. Gastroenterol. 7, 266-269.
20. Ketcham, C. M., Anai, S., Reutzel, R., Sheng, S., Schuster, S. M., Brenes, R. B., Agbandje-McKenna, M., McKenna, R., Rosser, C. J. & Boehlein, S. K. (2005). Mol. Cancer Ther. 4, 1031-1038.
21. Kleywegt, G. J. (2007). Acta Cryst. D63, 94-100.
22. Liu, W., Ren, T., Jiang, B., Gong, M. & Shou, C. (2007). Can. J. Microbiol. 53, 270-276.
23. Otwinowski, Z. & Minor, W. (1997). Proceedings of the CCP4 Study Weekend. Data Collection and Processing, edited by L. Sawyer, N. Isaacs & S. Bailey, pp. 56-62. Warrington: Daresbury Laboratory.
24. Reutzel, R., Boehlein, S. K., Govindasamy, L., Brenes, R. B., Agbandje-McKenna, M., Schuster, S. M. & McKenna, R. (2002). Acta Cryst. D58, 2141-2144.
25. Rossmann, M. G. (1990). Acta Cryst. A46, 73-82.
26. Sasaki, H., Igaki, H., Ishizuka, T., Kogoma, Y., Sugimura, T. & Terada, M. (1995). Jpn J. Cancer Res. 86, 791-794.
27. Schüttelkopf, A. W. & van Aalten, D. M. F. (2004). Acta Cryst. D60, 1355-1363.
28. Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.
29. Steinemann, C., Fenner, M., Binz, H. & Parish, R. W. (1984). Proc. Natl Acad. Sci. USA, 81, 3747-3750.