Polyploid evolution and plastid DNA variation in the Dactylorhiza incarnata/maculata complex (Orchidaceae) in Scandinavia

Molecular Ecology

Volumn 17, Issue 23, 2008, Pages 5075-5091

  Hedrén, Mikael ^a   Nordström, Sofie ^a   Ståhlberg, David ^a  

^a LUND UNIVERSITY   (Sweden)

Author keywords

Allopolyploidy; Dactylorhiza; Hybridization; Orchidaceae; Plastid DNA; Polyploid evolution

Indexed keywords

MICROSATELLITE DNA; PLANT DNA;

ARTICLE; GENETIC MARKER; GENETIC VARIABILITY; GENETICS; HAPLOTYPE; MOLECULAR EVOLUTION; ORCHIDACEAE; PLASTID; PLASTID GENOME; POLYPLOIDY; POPULATION GENETICS; SCANDINAVIA;

DNA, PLANT; EVOLUTION, MOLECULAR; GENETIC MARKERS; GENETIC VARIATION; GENETICS, POPULATION; GENOME, PLASTID; HAPLOTYPES; MICROSATELLITE REPEATS; ORCHIDACEAE; PLASTIDS; POLYPLOIDY; SCANDINAVIA;

DACTYLORHIZA; DACTYLORHIZA MACULATA; ORCHIDACEAE;

EID: 56549113104     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2008.03965.x     Document Type: Article

References (88)

1. Aagaard SMD, Såstad SM, Greilhuber J, Moen A (2005) A secondary hybrid zone between diploid Dactylorhiza incarnata ssp. cruenta and allotetraploid D. lapponica (Orchidaceae). Heredity, 94, 488 496.
2. Asker SE, Jerling L (1992) Apomixis in Plants. CRC Press, Boca Raton, Florida.
3. Bandelt H-J, Forster P, Röhl A (1999) Median-joining networks for inferring intraspecific phylogenies. Molecular Biology and Evolution, 16, 37 48.
4. Bateman RM, Denholm I (1983) A reappraisal of the British and Irish dactylorchids, 1. The tetraploid marsh-orchids. Watsonia, 14, 347 376.
5. Baumann H, Künkele S, Lorenz R (2006) Orchideen Europas. Verlag Eugen Ulmer, Stuttgart, Germany.
6. de Bodt S, Maere S, Van de Peer Y (2005) Genome duplications and the origin of angiosperms. Trends in Ecology & Evolution, 20, 591 597.
7. Borgen L, Hultgård U-M (2003) Parnassia palustris: a genetically diverse species in Scandinavia. Botanical Journal of the Linnean Society, 142, 347 372.
8. Brochmann C, Soltis PS, Soltis DS (1992) Recurrent formation and polyphyly of Nordic polyploids in Draba (Brassicaceae). American Journal of Botany, 79, 673 688.
9. Brochmann C, Brysting AK, Alsos IG et al 2004) Polyploidy in arctic plants. In : Biological Relevance of Polyploidy: Ecology to Genomics (eds Leitch AR, Soltis DE, Soltis PS, Leitch IJ, Pires JC). Biological Journal of the Linnean Society, 82, 521 536.
10. Buttler KP (1991) Field Guide to the Orchids of Britain and Europe, revised English edition. The Crowood Press, Swindon, UK.
11. Chase MW, Hills HG (1991) Silica gel: an ideal material for field preservation of leaf samples for DNA studies. Taxon, 40, 215 220.
12. Cook LM, Soltis PS, Brunsfeld SJ, Soltis DS (1998) Multiple independent formations of Tragopogon tetraploids (Asteraceae): evidence from RAPD markers. Molecular Ecology, 7, 1293 1302.
13. Corriveau JL, Coleman AW (1988) Rapid screening method to detect potential biparental inheritance of plastid DNA and results for over 200 angiosperm species. American Journal of Botany, 75, 1443 1458.
14. Cozzolino S, Cafasso D, Pellegrino G, Musacchio A, Widmer A (2003) Molecular evolution of a plastid tandem repeat locus in an orchid lineage. Journal of Molecular Evolution, 57, S41 S49.
15. Cui L, Wall PK, Leebens-Mack JH et al 2006) Widespread genome duplications throughout the history of flowering plants. Genome Research, 16, 738 749.
16. Delforge P (2001) Guide des Orchidées d'Europe, d'Afrique du Nord et du Proche-Orient. Delachaux et Niestlé, Lausanne & Paris.
17. Delin A (2002) Dactylorhiza i Gästrikland och Hälsingland enligt Mikael Hedrén. [Dactylorhiza in Gästrikland and Hälsingland, E central Sweden]. Växter i Gästrikland och Hälsingland, 2, 35 38.
18. Demesure B, Sodzi N, Petit RJ (1995) A set of universal primers for amplification of polymorphic non-coding regions of mitochondrial and chloroplast DNA in plants. Molecular Ecology, 4, 129 131.
19. Devos N, Tyteca D, Raspé O, Wesselingh RA, Jacquemart A-L (2003) Patterns of chloroplast diversity among western European Dactylorhiza species (Orchidaceae). Plant Systematics and Evolution, 243, 85 97.
20. Dixon CJ (2006) A means of estimating the completeness of haplotype sampling using the Stirling probability distribution. Molecular Ecology Notes, 6, 650 652.
21. Doyle JJ, Doyle JH (1990) Isolation of plant DNA from fresh tissue. Focus, 12, 13 15.
22. Ehrendorfer F (1980) Polyploidy and distribution. In : Polyploidy Biological Relevance (ed. Lewis WH pp. 45 60. Plenum Press, New York.
23. Ekman J (1985) Mossnycklar och ofläckade sumpnycklar funna I Roslagen. [Dactylorhiza sphagnicola and unspotted D. traunsteineri in E Uppland, SE central Sweden]. Svensk Botanisk Tidskrift, 79, 85 91.
24. Excoffier L, Smouse PE, Quattro JM (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 131, 479 491.
25. Excoffier L, Laval G, Schneider S (2005) Arlequin version 3.0: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online, 1, 47 50.
26. Fluxus technology (2007) Network 4.2.0.1. User Guide. http://www.fluxus-technology.com.
27. Gower JC (1966) Some distance properties of latent root and vector methods used in multivariate analysis. Biometrika, 53, 325 338.
28. Grant V (1981) Plant Speciation. Columbia University Press, New York.
29. Hamilton MB (1999) Four primer pairs for the amplification of chloroplast intergenic regions with infraspecific variation. Molecular Ecology, 8, 521 523.
30. Hansson S (2005) En intressant orkidé på Rådmansö. (A locally arisen allotetraploid Dactylorhiza on Rådmansö.) Svensk Botanisk Tidskrift, 99, 94 96.
31. Harris SA, Ingram R (1991) Chloroplast DNA and biosystematics: the effects of intraspecific diversity and plastid transmission. Taxon, 40, 393 412.
32. Hedrén M (1996a) Genetic differentiation, polypoidization and hybridization in Northern European Dactylorhiza (Orchidaceae): Evidence from allozyme markers. Plant Systematics and Evolution, 201, 31 55.
33. Hedrén M (1996b) The allotetraploid nature of Dactylorhiza praetermissa (Orchidaceae) confirmed. Watsonia, 21, 113 118.
34. Hedrén M (1996c) Electrophoretic evidence for allotetraploid origin of Dactylorhiza purpurella (Orchidaceae). Nordic Journal of Botany, 16, 127 134.
35. Hedrén M (2001a) Conservation priorities in the taxonomically complex genus Dactylorhiza. Lindleyana, 16, 17 25.
36. Hedrén M (2001b) Dactylorhiza incarnata/maculata-komplexet på Gotland. Rindi, 2001, 61 74.
37. Hedrén M (2002a) Speciation patterns in the Dactylorhiza incarnata/maculata polyploid complex (Orchidaceae): evidence from molecular markers. Journal of Europäischen Orchideen, 34, 707 731.
38. Hedrén M (2002b) Systematics of the Dactylorhiza euxina/incarnata/maculata polyploid complex (Orchidaceae) in Turkey: evidence from allozyme data. Plant Systematics and Evolution, 229, 23 44.
39. Hedrén M (2003) Plastid DNA variation in the Dactylorhiza incarnata/maculata polyploid complex and the origin of allotetraploid D. sphagnicola (Orchidaceae). Molecular Ecology, 12, 2669 2680.
40. Hedrén M (2005) Artbildning och släktskap inom orkidésläktet Dactylorhiza, handnycklar (Speciation and relationships in the orchid genus Dactylorhiza). Svensk Botanisk Tidskrift, 99, 70 93.
41. Hedrén M, Nordström S, Persson H, Pedersen HÆ, Hansson S (2007) Patterns of polyploid evolution in Greek Dactylorhiza (Orchidaceae) as revealed by allozymes, AFLPs and plastid DNA data. American Journal of Botany, 94, 1205 1218.
42. Hegarty MJ, Hiscock SJ (2008) Genomic clues to the evolutionary success of polyploid plants. Current Biology, 18, R435 R444.
43. Heslop-Harrison J (1954) A synopsis of the dactylorchids of the British Isles. Berichte der Geobotanische Forschungsinstitut Rübel, 1953, 53 82.
44. Hylander N (1966) Nordisk Kärlväxtflora II. Almquist & Wiksell, Stockholm, Sweden.
45. Jonsell B (ed.) (2004) Flora Nordica, General Volume. Stockholm, Sweden.
46. Jordan WC, Courtney MW, Neigel JE (1996) Low levels of infraspecific genetic variation at a rapidly evolving chloroplast DNA locus in North American duckweeds (Lemnaceae). American Journal of Botany, 83, 430 439.
47. Kruskal JB (1964a) Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis. Psychometrika, 29, 1 27.
48. Kruskal JB (1964b) Nonmetric multidimensional scaling: a numerical method. Psychometrika, 29, 28 42.
49. Leitch IJ, Bennett MD (1997) Polyploidy in angiosperms. Trends in Plant Science, 2, 470 476.
50. Les DH, Crawford DJ, Landolt E, Gabel JD, Kimball RT (2002) Phylogeny and systematics of Lemnaceae, the duckweed family. Systematic Botany, 27, 221 240.
51. Lord RM, Richards AJ (1977) A hybrid swarm between the diploid Dactylorhiza fuchsii (Druce) Soó and the tetraploid D. purpurella (T. and T. A. Steph.) Soó in Durham. Watsonia, 11, 205 210.
52. Löve Á, Löve D (1974) Origin and the evolution of the arctic and alpine floras. In : Arctic and Alpine Environments (eds Ives JD, Barry RG pp. 571 603. Methuen, London.
53. Luttikhuizen PC, Stift M, Kuperus P, van Tienderen PH (2007) Genetic diversity in diploid vs. tetraploid Rorippa amphibia (Brassicaceae). Molecular Ecology, 16, 3544 3553.
54. Ma X-F, Gustafson JP (2005) Genome evolution of allopolyploids: a process of cytological and genetic diploidization. Cytogenetic and Genome Research, 109, 236 249.
55. Masterson J (1994) Stomatal size in fossil plants: evidence for polyploidy in majority of angiosperms. Science, 264, 421 424.
56. Mossberg B, Nilsson S (1987) Orkidéer, Europas Vildväxande Arter. Wahlström & Widstrand, Stockholm, Sweden.
57. Nei M, Li WH (1979) Mathematical model for studying genetic variation in terms of restriction endonucleases. Proceedings of the National Academy of Sciences, USA, 76, 5269 5273.
58. Nelson E (1976) Monographie und Ikonographie der Orchidaceen-Gattung, III. Dactylorhiza. Zürich, Switzerland.
59. Nordström S, Hedrén M (2007) Development of polymorphic nuclear microsatellite markers for polyploid and diploid members of the orchid genus Dactylorhiza. Molecular Ecology Notes, 7, 644 647.
60. Ohta T, Kimura M (1973) The model of mutation appropriate to estimate the number of electrophoretically detectable alleles in a genetic population. Genetics Research, 22, 201 204.
61. Paun O, Fay MF, Soltis DE, Chase MW (2007) Genetic and epigenetic alterations after hybridization and genome doubling. Taxon, 56, 649 656.
62. Pedersen HÆ (1998) Species concept and guidelines for infraspecific taxonomic ranking in Dactylorhiza (Orchidaceae). Nordic Journal of Botany, 18, 289 311.
63. Pedersen HÆ (2004) Dactylorhiza majalis s.l. (Orchidaceae) in acid habitats: variation patterns, taxonomy, and evolution. Nordic Journal of Botany, 22, 641 658.
64. Pedersen HÆ, Hedrén M, Bateman RM (2003) (1600) Proposal to conserve the name Orchis majalis against O. elata, O vestita, and O. sesquipedalis (Dactylorhiza: Orchidinae: Orchidaceae). Taxon, 52, 633 634.
65. Pettersson B (1947) On some hybrid populations of Orchis incarnata × maculata in Gotland. Svensk Botanisk Tidskrift, 41, 115 141.
66. Pillon Y, Fay MF, Hedrén M et al 2007) Insights into the evolution and biogeography of Western European species complexes in Dactylorhiza (Orchidaceae). Taxon, 56, 1185 1208.
67. Ramsey J, Schemske DW (1998) Pathways, mechanisms, and rates of polyploid formation in flowering plants. Annual Review of Ecology and Systematics, 29, 467 501.
68. Roberts RH (1966) Studies on Welsh orchids, III. The coexistence of some of the tetraploid species of marsh orchids. Watsonia, 6, 260 267.
69. Rohlf FJ (2005) NTSYSpc, Numerical Taxonomy and Multivariate Analysis System, Version 2.2. Exeter Software, Setauket, New York.
70. Rosquist G, Prentice HC (2002) Genetic variation in Scandinavian Anthericum liliago (Anthericaceae): allopolyploidy, hybridization and immigration history. Plant Systematics and Evolution, 236, 55 72.
71. Rosvall S, Pettersson B (1951) Gotlands Orkidéer. Albert Bonnier, Stockholm, Sweden.
72. Shore J (1991) Tetrasomic inheritance and isozyme variation in Turnera ulmifolia vars. elegans Urb. and intermedia Urb. (Turneraceae). Heredity, 66, 305 312.
73. Soliva M, Widmer A (1999) Genetic and floral divergence among sympatric populations of Gymnadenia conopsea s.l. (Orchidaceae) with different flowering phenology. International Journal of Plant Science, 160, 897 905.
74. Soltis PS, Plunkett GM, Novak SJ, Soltis DS (1995) Genetic variation in Tragopogon species: additional origins of the allotetraploids T. mirus and T. miscellus (Compositae). American Journal of Botany, 82, 1329 1341.
75. Soltis DE, Rieseberg LH (1986) Autopolyploidy in Tolmiea menziesii (Saxifragaceae): genetic insights from enzyme electrophoresis. American Journal of Botany, 73, 310 318.
76. Soltis DE, Soltis PS (1989) Allopolyploid speciation in Tragopogon: insights from chloroplast DNA. American Journal of Botany, 76, 1119 1124.
77. Soltis PS, Soltis DS (1991) Multiple origins of the allotetraploid Tragopogon mirus (Compositae): rDNA evidence. Systematic Botany, 16, 407 413.
78. Soltis DE, Soltis PS (1993) Molecular data and the dynamic nature of polyploidy. Critical Reviews in Plant Sciences, 12, 243 273.
79. Soltis DE, Soltis PS (1999) Polyploidy: recurrent formation and genome evolution. Trends in Ecology &Evolution, 14, 348 352.
80. Soltis DE, Soltis PS, Ness BD (1988) Chloroplast-DNA variation and multiple origins of autopolyploidy in Heuchera micrantha (Saxifragaceae). Evolution, 43, 650 656.
81. Ståhlberg D (2007) Systematics, phylogeography and polyploid evolution in the Dactylorhiza maculata complex (Orchidaceae). Doctoral Dissertation, Lund University, Lund, Sweden.
82. Ståhlberg D, Hedrén M (2007) Habitat differentiation, hybridization and gene flow patterns in mixed populations of diploid and autotetraploid Dactylorhiza maculata s.l. (Orchidaceae). Evolutionary Ecology doi:.
83. Stebbins GL (1971) Chromosomal Evolution in Higher Plants. Edward Arnold, London.
84. Taberlet P, Gielly L, Pautou G, Bouvet J (1991) Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Molecular Biology, 17, 1105 1109.
85. Thompson JD, Lumaret R (1992) The evolutionary dynamics of polyploid plants: origins, establishment and persistence. Trends in Ecology and Evolution, 7, 302 307.
86. Wallace LE (2003) Molecular evidence for allopolyploid speciation and recurrent origins in Platanthera huronensis (Orchidaceae). International Journal of Plant Science, 164, 907 916.
87. Wendel JF (2000) Genome evolution in polyploids. Plant Molecular Biology, 42, 225 249.
88. deWet JMJ (1980) Origins of polyploids. In : Polyploidy Biological Relevance (ed. Lewis WH pp. 3 15. Plenum Press, New York.