Typing of 48 autosomal SNPs and amelogenin with GenPlex SNP genotyping system in forensic genetics

Forensic Science International: Genetics

Volumn 3, Issue 1, 2008, Pages 1-6

  Tomas, Carmen ^a   Stangegaard, Michael ^a   Børsting, Claus ^a   Hansen, Anders Johannes ^a   Morling, Niels ^a  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

Amelogenin; Autosomal SNPs; Forensic genetics; GenPlex

Indexed keywords

AMELOGENIN; DNA; OLIGONUCLEOTIDE;

ALLELE; ARTICLE; CAPILLARY ELECTROPHORESIS; CONTROLLED STUDY; DENMARK; FORENSIC GENETICS; GENE AMPLIFICATION; GENE LOCUS; GENE MUTATION; GENOTYPE; GREENLAND; HETEROZYGOSITY; HOMOZYGOSITY; HUMAN; HYBRIDIZATION; INTERMETHOD COMPARISON; MICROTITER PLATE ASSAY; MOLECULAR PROBE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; REPRODUCIBILITY; ROBOTICS; SINGLE NUCLEOTIDE POLYMORPHISM; SOMALIA;

AFRICAN CONTINENTAL ANCESTRY GROUP; AMELOGENIN; DNA; EUROPEAN CONTINENTAL ANCESTRY GROUP; FORENSIC GENETICS; GENOTYPE; HUMANS; OLIGODEOXYRIBONUCLEOTIDES; POLYMERASE CHAIN REACTION; POLYMORPHISM, SINGLE NUCLEOTIDE; SENSITIVITY AND SPECIFICITY;

EID: 56549084702     PISSN: 18724973     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.fsigen.2008.06.007     Document Type: Article

References (13)

1. The SNPforID consortium: http://www.snpforid.org.
2. Sanchez J.J., Phillips C., Borsting C., Balogh K., Bogus M., Fondevila M., Harrison C.D., Musgrave-Brown E., Salas A., Syndercombe-Court D., Schneider P.M., Carracedo A., and Morling N. A multiplex assay with 52 single nucleotide polymorphisms for human identification. Electrophoresis 27 (9) (2006) 1713-1724
3. Børsting C., Sanchez J.J., Hansen H.E., Hansen A.J., Bruun H.Q., and Morling N. Performance of the SNPforID 52 SNP-plex assay in paternity testing. Forensic Sci. Int. 2 (2008) 292-300
4. Hu G. DNA polymerase-catalyzed addition of nontemplated extra nucleotides to the 3' end of a DNA fragment. DNA Cell. Biol. 12 (1993) 763-770
5. Magnuson V.L., Ally D.S., Nylund S.J., Karanjawala Z.E., Rayman J.B., Knapp J.I., Lowe A.L., Ghosh S., and Collins F.S. Substrate nucleotide-determined non-templated addition of adenine by Taq DNA polymerase: implications for PCR-based genotyping and cloning. Biotechniques 21 (1996) 700-709
6. Mengel-Jørgensen J., Sanchez J.J., Børsting C., Kirpekar F., and Morling N. Typing of multiple SNPs Using ribonuclease cleavage of DNA/RNA chimeric single base extension primers and detection by MALDI-TOF mass spectrometry. Anal. Chem. 77 (2005) 5229-5235
7. Børsting C., Sanchez J.J., and Morling N. SNP typing on the NanoChip electronic microarray. Methods Mol. Biol. 297 (2005) 155-168
8. Harrison C., Musgrave-Brown E., Bender K., Carracedo A., Morling N., Schneider P., and Syndercombe-Court D. A sensitive issue: pyrosequencing as a valuable forensic SNP typing platform. Int. Congress Ser. 1288 (2006) 52-54
9. Sobrino B., Lareu M., Brion M., and Carracedo A. SNP genotyping with single base extension-tag microarrays. Int. Congress Ser. 1261 (2004) 331-333
10. Sobrino B., Brion M., and Carracedo A. SNPs in forensic genetics: a review of SNP typing methodologies. Forensic Sci. Int. 154 (2005) 181-191
11. AB SNPlex™ chemistry guide pdf: http://docs.appliedbiosystems.com/pebiodocs/04360856.pdf.
12. Philips C., Fang R., Ballard D., Fondevila M., Harrison C., Hyland F., Musgrave-Brown E., Proff C., Ramos-Luis E., Sobrino B., Carracedo A., Furtado M.R., Syndercombe Court D., and Schneider P.M. Evaluation of the Genplex SNP typing system and a 49-plex forensic marker panel. Forensic Sci. Int. Genet. 1 (2007) 180-185
13. ®-3000 and GenPlex SNP genotyping in forensic genetics. JALA (J. Assoc. Lab. Autom.) 13 (2008) 297-303