Interaction of dinuclear ruthenium(II) supramolecular cylinders with DNA: Sequence-specific binding, unwinding, and photocleavage

Chemistry - A European Journal

Volumn 14, Issue 33, 2008, Pages 10408-10414

  Malina, Jaroslav ^a   Hannon, Michael J ^b   Brabec, Viktor ^a  

^a INSTITUTE OF BIOPHYSICS   (Czech Republic)

^b UNIVERSITY OF BIRMINGHAM   (United Kingdom)

Author keywords

DNA cleavage; DNA unwinding; Helical structures; Ruthenium; Supramolecular chemistry

Indexed keywords

BINDING ENERGY; CYLINDERS (SHAPES); DNA; DNA SEQUENCES; FLOW INTERACTIONS; GENES; IRON COMPOUNDS; NUCLEOTIDES; ORGANIC ACIDS; RUTHENIUM; SUPRAMOLECULAR CHEMISTRY;

BINDING PREFERENCES; DINUCLEAR; DNA CLEAVAGE; DNA UNWINDING; HELICAL STRUCTURES; MAJOR GROOVES; METALLOSUPRAMOLECULAR; METALLOSUPRAMOLECULAR CHEMISTRIES; NEW CLASSES; PHOTOCLEAVAGE; PLASMID DNAS; SPECIFIC BINDINGS; STRAND BREAKS; SUPERCOILED; SYNTHETIC AGENTS; UVA LIGHTS;

NUCLEIC ACIDS;

DNA; ETHIDIUM; LIGAND; RUTHENIUM DERIVATIVE;

ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHOTOCHEMISTRY; PLASMID;

BASE SEQUENCE; DNA; ETHIDIUM; LIGANDS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PHOTOCHEMISTRY; PLASMIDS; RUTHENIUM COMPOUNDS;

EID: 56349146078     PISSN: 09476539     EISSN: 15213765     Source Type: Journal    
DOI: 10.1002/chem.200801364     Document Type: Article

References (29)

1. M. J. Clarke, Coord. Chem. Rev. 2002, 232, 69-93.
2. M. Galanski, V. B. Arion, M. A. Jakupec, B. K. Keppler, Curr. Pharm. Des. 2003, 9, 2078-2089.
3. E. Alessio, G. Mestroni, A. Bergamo, G. Sava, Curr. Topics Med. Chem. 2004, 4, 1525-1535.
4. V. Brabec, O. Novakova, Drug Resist. Updates 2006, 9, 111-122.
5. C. A. Vock, W. H. Ang, C. Scolaro, A. D. Phillips, L. Lagopoulos, L. Juillerat-Jeanneret, G. Sava, R. Scopelliti, P. J. Dyson, J. Med. Chem. 2007, 50, 2166-2175.
6. M. J. Hannon, Chem. Soc. Rev. 2007, 36, 280-295.
7. M. J. Hannon, L. J. Childs, Supramol. Chem. 2004, 16, 7-22.
8. M. J. Hannon, V. Moreno, M. J. Prieto, E. Moldrheim, E. Sletten, I. Meistermann, C. J. Isaac, K. J. Sanders, A. Rodger, Angew. Chem. 2001, 113, 903-908;
9. Angew. Chem. Int. Ed. 2001, 40, 879-884.
10. A. C. G. Hotze, B. M. Kariuki, M. J. Hannon, Angew. Chem. 2006, 118, 4957-4960;
11. Angew. Chem. Int. Ed. 2006, 45, 4839-4842.
12. G. I. Pascu, A. C. G. Hotze, C., Sanchez-Cano, B. M. Kariuki, M. J. Hannon, Angew. Chem. 2007, 119, 4452-4456;
13. Angew. Chem. Int. Ed. 2007, 46, 4374-4378.
14. J. Malina, M. J. Hannon, V. Brabec, Nucleic Acids Res. 2008, 36, 3630-3638.
15. S. Kemp, N. J. Wheate, D. P. Buck, M. Nikac, J. G. Collins, J. R. Aldrich-Wright, J. Inorg. Biochem. 2007, 101, 1049-1058.
16. C. C. Cheng, S. E. Rokita, C. J. Burrows, Angew. Chem. 1993, 105, 290-292;
17. Angew. Chem. Int. Ed. Engl. 1993, 32, 277-278.
18. S. A. Lesko, R. J. Lorentzen, P. O. P. Tso, Biochemistry 1980, 19, 3023-3028.
19. E. Gicquel, N. Paillous, P. Vicendo, Chem. Commun. 1998, 997-998.
20. E. Gicquel, N. Paillous, P. Vicendo, Photochem. Photobiol. 2000, 72, 583-589.
21. J. R. Kanofsky, Photochem. Photobiol. 1991, 53, 93-99.
22. A. U. Khan, J. Phys. Chem. 1976, 80, 2219-2228.
23. J. C. Dabrowiak, J. Goodisman in Quantitative Footprinting Analysis of Drug-DNA Interactions (Ed.: N. R. Kallenbach), Academic Press, New York, 1989, pp. 143-174.
24. K. R. Fox, M. J. Waring in High-resolution Footprinting Studies of Drug-DNA Complexes Using Chemical and Enzymatic Probes, (Eds.: J. B. Chaires, M. J. Waring), Academic Press Inc, San Diego/CA, 2001, pp. 412-430.
25. M. V. Keck, S. J. Lippard, J. Am. Chem. Soc. 1992, 114, 3386-3390.
26. V. Brabec, E. Palecek, Biophys Chem. 1976, 4, 76-92.
27. M. D. Wyatt, B. J. Garbiras, M. K. Haskell, M. Lee, R. L. Souhami, J. A. Hartley, Anti-Cancer Drug Des. 1994, 9, 511-529.
28. M. J. Hannon, C. L. Painting, A. Jackson, J. Hamblin, W. Errington, Chem. Commun. 1997, 1807-1808.
29. J. M. C. A. Kerckhoffs, J. C. Peberdy, I. Meistermann, L. J. Childs, C. J. Isaac, C. R. Pearmund, V. Reudegger, S. Khalid, N. W. Alcock, M. J. Hannon, A. Rodger, Dalton Trans. 2007, 734-742.