Evaluation of laboratory diagnosis of the first norovirus outbreak in Turkey in 2008;Türkiye'de 2008 yιlιnda ortaya çιkan ilk norovirus salgιnιnιn laboratuvar sonuçlarιnιn deǧerlendirilmesi

Mikrobiyoloji Bulteni

Volumn 42, Issue 4, 2008, Pages 607-615

  Uyar, Yavuz ^a   Çarhan, Ahmet ^a   Özkaya, Etem ^a   Ertek, Mustafa ^b  

^a Viroloji Tani ve Araştirma Laboratuvan ^*  (Turkey)

^b Refik Saydam Hifzissihha Merkezi   (Turkey)

Author keywords

Antigen detection; ELISA; Norovirus; Outbreak; Real time PCR; Turkey

Indexed keywords

COMPLEMENTARY DNA; VIRUS ANTIGEN; VIRUS RNA;

ARTICLE; COMPARATIVE STUDY; ENZYME LINKED IMMUNOSORBENT ASSAY; EPIDEMIC; EVALUATION; FECES; GASTROENTERITIS; GENETICS; HUMAN; IMMUNOLOGY; ISOLATION AND PURIFICATION; NOROVIRUS; POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; TURKEY (REPUBLIC); VIROLOGY; VIRUS INFECTION;

ANTIGENS, VIRAL; CALICIVIRIDAE INFECTIONS; DISEASE OUTBREAKS; DNA, COMPLEMENTARY; ENZYME-LINKED IMMUNOSORBENT ASSAY; FECES; GASTROENTERITIS; HUMANS; NOROVIRUS; POLYMERASE CHAIN REACTION; RNA, VIRAL; SENSITIVITY AND SPECIFICITY; TURKEY;

EID: 55949109386     PISSN: 03749096     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (30)

1. Bryce J, Boschi-Pinto C, Shibuya K, Black RE. WHO estimates of the causes of death in children. Lancet 2005; 365: 1147-52.
2. Turcios RM, Widdowson MA, Sulka AC, Mead PS, Glass RI. Reevaluation of epidemiological criteria for identifying outbreaks of acute gastroenteritis due to norovirus: United States, 1998-2000. Clin Infect Dis 2006; 42: 964-9.
3. Mead PS, Slutsker L, Dietz V, et al. Food-related illness and death in the United States. Emerg Infect Dis 1999; 5: 607-25.
4. Koopmans M, von Bonsdorff CH, Vinje J, de Medici D. Monroe S. Foodborne viruses. FEMS Microbiol Rev 2002; 26: 187-205.
5. Green KY, Chanock RM, Kapikian AZ. Human caliciviruses, pp: 841-74. In: Knipe DM, Howley PM (eds), Fields Virology. 2001, 4h ed. Lippincott- Raven, Philadelphia.]
6. Centers for Disease Control and Prevention. "Norwalk-like viruses": public health consequences and outbreak management. MMWR 2001; 50 (No. RR-9):1-17.
7. Zheng DP, Ando T, Fankhauser RL, Beard RS, Glass RI, Monroe SS. Norovirus classification and proposed strain nomenclature. Virology 2006; 346: 312-23.
8. Rabenau HF, Stürmer M, Buxbaum S, Walczok A, Preiser W, Doerr HW. Laboratory diagnosis of norovirus: which method is the best? Intervirology 2003; 46: 232-8.
9. Wu HM, Fornek M, Schwab KJ, et al. A norovirus outbreak at a long-term-care facility: the role of environmental surface contamination. Infect Control Hosp Epidemiol 2005; 26: 802-10.
10. Barker J, Vipond J8, Bloomfield SF. Effects of cleaning and disinfection in reducing the spread of Norovirus contamination via environmental surfaces. J Hosp Infect 2004; 58: 42-9.
11. Becker KM, Moe CL, Southwick KL, MacCormack JN. Transmission of Norwalk virus during football game. N Engl J Med 2000; 343: 1223-7.
12. Hoehne M, Schreier E. Detection of Norovirus genogroup I and II by multiplex real-time RT-PCR using a 3′- minor groove binder-DNA probe. BMC Infect Dis 2006; 6: 69.
13. Öztürk R. Norovirus Enfeksiyonlan. www.ekmud.org/tr
14. Özdamar M. Pediatrik nozokomiyal ishallerde viral etkenlerin saptanmasi. Uzmanlik Tezi, IÜ Cerrahpaşa Tιp Fakültesi, Mikrobiyoloji ve Klinik Mikrobiyoloji Anabilim Dalι. Istanbul, 2004.
15. Atmar RL, Estes MK. Diagnosis of noncultivatable gastroenteritis viruses, the human caliciviruses. Clin Microbiol Rev 2001; 14: 15-37.
16. Vipond IB, Pelosi E, Williams J, et al. A díagnostic EIA for detection of the prevalent SRSV strain in United Kingdom outbreaks of gastroenteritis. J Med Virol 2000; 61: 132-7.
17. de Bruin E, Duizer E, Vennema H, Koopmans MP. Diagnosis of Norovirus outbreaks by commercial ELISA or RT-PCR. J Virol Methods 2006; 137: 259-64.
18. Tu ET, Nguyen T, Lee P, et al. Norovirus Gil. 4 strains and outbreaks, Australia. Emerg Infect Dis 2007; 13: 1128-30.
19. Fankhauser RL, Noel JS, Monroe SS, Ando T, Glass RI. Molecular epidemiology of "Norwalk-like viruses" in outbreaks of gastroenteritis in the United States. J Infect Dis 1998; 178: 1571-8.
20. Noel JS, Fankhauser RL, Ando T, Monroe SS, Glass RI. Identification of a distinct common strain of "Norwalk-like viruses" having a global distribution. J Infect Dis 1999; 179: 1334-44.
21. White PA, Hansman GS, Li A, et al. Norwalk-like virus 95/96-US strain is a major cause of gastroenteritis outbreaks in Australia. J Med Virol 2002; 68: 113-8.
22. Lopman B, Vennema H, Kohli E, et al. Increase in viral gastroenteritis outbreaks in Europe and epidemic spread of new norovirus variant. Lancet 2004; 363: 682-8.
23. Widdowson MA, Cramer EH, Hadley L, et al. Outbreaks of acute gastroenteritis on cruise ships and on land: identification of a predominant circulating strain of norovirus-United States, 2002. J Infect Dis 2004; 190: 27-36.
24. Bull RA, Tu ET, McIver CJ, Rawlinson WD, White PA. Emergence of a new norovirus genotype II. 4 variant associated with global outbreaks of gastroenteritis. J Clin Microbiol 2006; 44: 327-33.
25. Onishi N, Hosoya M, Matsumoto A, et al. Molecular epidemiology of norovirus gastroenteritis in Soma, Japan, 2001-2003. Pediatr Int 2008; 50: 65-9.
26. Maunula L, von Bonsdorff C-H. Norovirus genotypes causing gastroenteritis outbreaks in Finland 1998-2002. J Clin Virol 2005; 34: 186-94.
27. Schmid M, Oehme R, Schalasta G, Brockmann S, Kimmig P, Enders G. Fast detection of Noroviruses using a real-time PCR assay and automated sample preparation. BMC Infect Dis 2004; 4: 15.
28. Sanz JC, Revilla A, Fernández M, Herranz N, Moreno S, Sánchez-Fauquier A. Assessment of two methods of antigenic detection by ELISA for the diagnosis of norovirus outbreaks. Enferm Infecc Microbiol Clin 2006; 24: 564-7.
29. Castriciano S, Luinstra K, Petrich A, et al. Comparison of the RIDASCREEN norovirus enzyme immunoassay to IDEIA NLV GI/GII by testing stools also assayed by RT-PCR and electron microscopy. J Virol Methods 2007; 141: 216-9.
30. Lopman BA, Reacher MH, Vipond IB, et al. Epidemiology and cost of nosocomial gastroenteritis, Avon, England, 2002-2003. Emerg Infect Dis 2004; 10: 1827-34.