메뉴 건너뛰기




Volumn 58, Issue 10, 2008, Pages 2336-2341

Nisaea denitrifcans gen. nov., sp. nov. and Nisaea nitritireducens sp. nov., two novel members of the class Alphaproteobacteria from the Mediterranean Sea

Author keywords

[No Author keywords available]

Indexed keywords

CYTOSINE; GENE PRODUCT; GENOMIC DNA; GUANINE; PROTEIN NIRK; PROTEIN NOSZ; RIBOSOME RNA; SURFACE WATER; UNCLASSIFIED DRUG; BACTERIAL DNA; NITROGEN DERIVATIVE; RNA 16S; SEA WATER;

EID: 55849152056     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.64592-0     Document Type: Article
Times cited : (34)

References (34)
  • 3
    • 0020330839 scopus 로고
    • A model for nitrite and nitrate distributions in oceanic oxygen minimum zones
    • Anderson, J. J., Okubo, A., Robbins, A. S. & Richards, F. A. (1982). A model for nitrite and nitrate distributions in oceanic oxygen minimum zones. Deep-Sea Res A 29, 1113-1140.
    • (1982) Deep-Sea Res A , vol.29 , pp. 1113-1140
    • Anderson, J.J.1    Okubo, A.2    Robbins, A.S.3    Richards, F.A.4
  • 5
    • 0036131842 scopus 로고    scopus 로고
    • Determination of the bacterial processes which are sources of nitrous oxide production in marine samples
    • Bonin, P., Tamburini, C. & Michotey, V. (2002). Determination of the bacterial processes which are sources of nitrous oxide production in marine samples. Water Res 36, 722-732.
    • (2002) Water Res , vol.36 , pp. 722-732
    • Bonin, P.1    Tamburini, C.2    Michotey, V.3
  • 6
    • 84983826067 scopus 로고
    • Oxygen deficient conditions and nitrate reduction in the eastern tropical North Pacific Ocean
    • Cline, J. D. & Richards, F. A. (1972). Oxygen deficient conditions and nitrate reduction in the eastern tropical North Pacific Ocean. Limnol Oceanogr 17, 885-900.
    • (1972) Limnol Oceanogr , vol.17 , pp. 885-900
    • Cline, J.D.1    Richards, F.A.2
  • 7
    • 0000866224 scopus 로고
    • Denitrification rates in the eastern tropical South Pacific
    • Codispoti, L. A. & Packard, T. T. (1980). Denitrification rates in the eastern tropical South Pacific. J Mar Res 38, 453-477.
    • (1980) J Mar Res , vol.38 , pp. 453-477
    • Codispoti, L.A.1    Packard, T.T.2
  • 10
    • 24344501339 scopus 로고    scopus 로고
    • Molecular, biochemical, and physiological approaches for understanding the ecology of denitrification
    • Goregues, C. M., Michotey, V. D. & Bonin, P. C. (2005). Molecular, biochemical, and physiological approaches for understanding the ecology of denitrification. Microb Ecol 49, 198-208.
    • (2005) Microb Ecol , vol.49 , pp. 198-208
    • Goregues, C.M.1    Michotey, V.D.2    Bonin, P.C.3
  • 11
    • 0036407716 scopus 로고    scopus 로고
    • Guyoneaud, R., Moune, S., Eatock, C., Bothorel, V., Hirschler-Rea, A., Willison, J., Duran, R., Liesack, W., Herbert, R. & other authors (2002). Characterization of three spiral-shaped purple nonsulfur bacteria isolated from coastal lagoon sediments, saline sulfur springs, and microbial mats: emended description of the genus Roseospira and description of Roseospira marina sp. nov., Roseospira navarrensis sp. nov., and Roseospira thiosulfatophila sp. nov. Arch Microbiol 178, 315-324.
    • Guyoneaud, R., Moune, S., Eatock, C., Bothorel, V., Hirschler-Rea, A., Willison, J., Duran, R., Liesack, W., Herbert, R. & other authors (2002). Characterization of three spiral-shaped purple nonsulfur bacteria isolated from coastal lagoon sediments, saline sulfur springs, and microbial mats: emended description of the genus Roseospira and description of Roseospira marina sp. nov., Roseospira navarrensis sp. nov., and Roseospira thiosulfatophila sp. nov. Arch Microbiol 178, 315-324.
  • 12
    • 73649209034 scopus 로고
    • Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature
    • Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
    • (1962) J Mol Biol , vol.5 , pp. 109-118
    • Marmur, J.1    Doty, P.2
  • 13
    • 33947308913 scopus 로고    scopus 로고
    • Azospirillum canadense sp. nov., a nitrogen-fixing bacterium isolated from corn rhizosphere
    • Mehnaz, S., Weselowski, B. & Lazarovits, G. (2007). Azospirillum canadense sp. nov., a nitrogen-fixing bacterium isolated from corn rhizosphere. Int J Syst Evol Microbiol 57, 620-624.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 620-624
    • Mehnaz, S.1    Weselowski, B.2    Lazarovits, G.3
  • 14
    • 0031573984 scopus 로고    scopus 로고
    • Evidence for anaerobic bacterial processes in the water column: Denitrification and dissimilatory nitrate ammonification in the northwestern Mediterranean Sea
    • Michotey, V. & Bonin, P. (1997). Evidence for anaerobic bacterial processes in the water column: denitrification and dissimilatory nitrate ammonification in the northwestern Mediterranean Sea. Mar Ecol Prog Ser 160, 47-56.
    • (1997) Mar Ecol Prog Ser , vol.160 , pp. 47-56
    • Michotey, V.1    Bonin, P.2
  • 16
    • 0000178510 scopus 로고
    • Denitrification processes in the Arabian Sea
    • Edited by D. Lal. Bangalore: Indian Academy of Sciences
    • Naqvi, S. W. A. (1994). Denitrification processes in the Arabian Sea. In The Biogeochemistry of the Arabian Sea, pp. 181-202. Edited by D. Lal. Bangalore: Indian Academy of Sciences.
    • (1994) The Biogeochemistry of the Arabian Sea , pp. 181-202
    • Naqvi, S.W.A.1
  • 17
    • 33745327643 scopus 로고    scopus 로고
    • Azospirillum melinis sp. nov., a group of diazotrophs isolated from tropical molasses grass
    • Peng, G., Wang, H., Zhang, G., Hou, W., Liu, Y., Wang, E. T. & Tan, Z. (2006). Azospirillum melinis sp. nov., a group of diazotrophs isolated from tropical molasses grass. Int J Syst Evol Microbiol 56, 1263-1271.
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 1263-1271
    • Peng, G.1    Wang, H.2    Zhang, G.3    Hou, W.4    Liu, Y.5    Wang, E.T.6    Tan, Z.7
  • 18
    • 0029853148 scopus 로고    scopus 로고
    • WWW-query: An on-line retrieval system for biological sequence banks
    • Perrière, G. & Gouy, M. (1996). WWW-query: an on-line retrieval system for biological sequence banks. Biochimie 78, 364-369.
    • (1996) Biochimie , vol.78 , pp. 364-369
    • Perrière, G.1    Gouy, M.2
  • 19
    • 0028824739 scopus 로고
    • Efficacy of the Ryu nonstaining KOH technique for rapidly determining Gram reactions of food-borne and waterborne bacteria and yeasts
    • Powers, E. M. (1995). Efficacy of the Ryu nonstaining KOH technique for rapidly determining Gram reactions of food-borne and waterborne bacteria and yeasts. Appl Environ Microbiol 61, 3756-3758.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 3756-3758
    • Powers, E.M.1
  • 20
    • 0042278367 scopus 로고    scopus 로고
    • Vibrio diabolicus sp. nov., a new polysaccharide-secreting organism isolated from a deep-sea hydrothermal vent polychaete annelid, Alvinella pompejana
    • Raguénès, G., Christen, R., Guézennec, J., Pignet, P. & Barbier, G. (1997). Vibrio diabolicus sp. nov., a new polysaccharide-secreting organism isolated from a deep-sea hydrothermal vent polychaete annelid, Alvinella pompejana. Int J Syst Bacteriol 47, 989-995.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 989-995
    • Raguénès, G.1    Christen, R.2    Guézennec, J.3    Pignet, P.4    Barbier, G.5
  • 21
    • 0002219708 scopus 로고
    • Azospirillum halopraeferens sp. nov., a nitrogen-fixing organism associated with roots of Kallar grass (Leptochloa fusca (L.) Kunth)
    • Reinhold, B., Hurek, T., Fendrik, I., Pot, B., Gillis, M., Kersters, K., Thielemans, S. & De Ley, J. (1987). Azospirillum halopraeferens sp. nov., a nitrogen-fixing organism associated with roots of Kallar grass (Leptochloa fusca (L.) Kunth). Int J Syst Bacteriol 37, 43-51.
    • (1987) Int J Syst Bacteriol , vol.37 , pp. 43-51
    • Reinhold, B.1    Hurek, T.2    Fendrik, I.3    Pot, B.4    Gillis, M.5    Kersters, K.6    Thielemans, S.7    De Ley, J.8
  • 22
    • 0036330611 scopus 로고    scopus 로고
    • Biodiversity of denitrifying and dinitrogen-fixing bacteria in an acid forest soil
    • Rosch, C., Mergel, A. & Bothe, H. (2002). Biodiversity of denitrifying and dinitrogen-fixing bacteria in an acid forest soil. Appl Environ Microbiol 68, 3818-3829.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 3818-3829
    • Rosch, C.1    Mergel, A.2    Bothe, H.3
  • 23
    • 0030814870 scopus 로고    scopus 로고
    • The ammonia monooxygenase structural gene amoA as a functional marker: Molecular fine-scale analysis of natural ammonia-oxidizing populations
    • Rotthauwe, J. H., Witzel, K. P. & Liesack, W. (1997). The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations. Appl Environ Microbiol 63, 4704-4712.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 4704-4712
    • Rotthauwe, J.H.1    Witzel, K.P.2    Liesack, W.3
  • 24
    • 0023375195 scopus 로고
    • The neighbour-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbour-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 25
    • 0027337265 scopus 로고
    • Isolation of typical marine bacteria by dilution culture: Growth, maintenance, and characteristics of isolates under laboratory conditions
    • Schut, F., de Vries, E. J., Gottschal, J. C., Robertson, B. R., Harder, W., Prins, R. A. & Button, D. K. (1993). Isolation of typical marine bacteria by dilution culture: growth, maintenance, and characteristics of isolates under laboratory conditions. Appl Environ Microbiol 59, 2150-2160.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 2150-2160
    • Schut, F.1    de Vries, E.J.2    Gottschal, J.C.3    Robertson, B.R.4    Harder, W.5    Prins, R.A.6    Button, D.K.7
  • 26
    • 0032935780 scopus 로고    scopus 로고
    • Phylogenetic position of Chitinophaga pinensis in the Flexibacter-Bacteroides-Cytophaga phylum
    • Sly, L. I., Taghavi, M. & Fegan, M. (1999). Phylogenetic position of Chitinophaga pinensis in the Flexibacter-Bacteroides-Cytophaga phylum. Int J Syst Bacteriol 49, 479-481.
    • (1999) Int J Syst Bacteriol , vol.49 , pp. 479-481
    • Sly, L.I.1    Taghavi, M.2    Fegan, M.3
  • 27
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 28
    • 0002137823 scopus 로고
    • Ecology of denitrification and dissimilatory nitrate reduction to ammonium
    • Edited by A. J. B. Zehnder. New York: Wiley
    • Tiedje, J. M. (1988). Ecology of denitrification and dissimilatory nitrate reduction to ammonium. In Biology of Anaerobic Microorganisms, pp. 179-227. Edited by A. J. B. Zehnder. New York: Wiley.
    • (1988) Biology of Anaerobic Microorganisms , pp. 179-227
    • Tiedje, J.M.1
  • 30
    • 33747873708 scopus 로고
    • Balneola vulgaris gen. nov., sp. nov., a member of the phylum Bacteroidetes from the north-western Mediterranean Sea
    • 2006
    • Urios, L., Agogue, H., Lesongeur, F., Stackebrandt, E. & Lebaron, P. (2006). Balneola vulgaris gen. nov., sp. nov., a member of the phylum Bacteroidetes from the north-western Mediterranean Sea. Int J Syst Evol Microbiol 56, 1883-1887.
    • (1883) Int J Syst Evol Microbiol , vol.56
    • Urios, L.1    Agogue, H.2    Lesongeur, F.3    Stackebrandt, E.4    Lebaron, P.5
  • 31
    • 0035066092 scopus 로고    scopus 로고
    • Marinitoga camini gen. nov., sp. nov., a rod-shaped bacterium belonging to the order Thermotogales, isolated from a deep-sea hydrothermal vent
    • Wery, N., Lesongeur, F., Pignet, P., Derennes, V., Cambon-Bonavita, M., Godfroy, A. & Barbier, G. (2001a). Marinitoga camini gen. nov., sp. nov., a rod-shaped bacterium belonging to the order Thermotogales, isolated from a deep-sea hydrothermal vent. Int J Syst Evol Microbiol 51, 495-504.
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 495-504
    • Wery, N.1    Lesongeur, F.2    Pignet, P.3    Derennes, V.4    Cambon-Bonavita, M.5    Godfroy, A.6    Barbier, G.7
  • 32
  • 33
    • 22544458519 scopus 로고    scopus 로고
    • Azospirillum oryzae sp. nov., a nitrogen-fixing bacterium isolated from the roots of the rice plant Oryza sativa
    • Xie, C. H. & Yokota, A. (2005). Azospirillum oryzae sp. nov., a nitrogen-fixing bacterium isolated from the roots of the rice plant Oryza sativa. Int J Syst Evol Microbiol 55, 1435-1438.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 1435-1438
    • Xie, C.H.1    Yokota, A.2
  • 34
    • 0024746373 scopus 로고
    • Use of degenerate oligonucleotides for amplification of the nifH gene from the marine cyanobacterium Trichodesmium thiebautii
    • Zehr, J. P. & McReynolds, L. A. (1989). Use of degenerate oligonucleotides for amplification of the nifH gene from the marine cyanobacterium Trichodesmium thiebautii. Appl Environ Microbiol 55, 2522-2526.
    • (1989) Appl Environ Microbiol , vol.55 , pp. 2522-2526
    • Zehr, J.P.1    McReynolds, L.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.