-
1
-
-
33646484899
-
Transcriptional network dynamics in macrophage activation
-
Nilsson R, Bajic VB, Suzuki H, et al. Transcriptional network dynamics in macrophage activation. Genomics 2006;88(2):133-142.
-
(2006)
Genomics
, vol.88
, Issue.2
, pp. 133-142
-
-
Nilsson, R.1
Bajic, V.B.2
Suzuki, H.3
-
3
-
-
0346095291
-
Principles of transcriptional control in the metabolic network of Saccharomyces cerevisiae
-
Ihmels J, Levy R, Barkai N. Principles of transcriptional control in the metabolic network of Saccharomyces cerevisiae. Nat Biotechnol 2003;22:86-92.
-
(2003)
Nat Biotechnol
, vol.22
, pp. 86-92
-
-
Ihmels, J.1
Levy, R.2
Barkai, N.3
-
4
-
-
0037197832
-
Determination of causal connectivities of species in reaction networks
-
Vance W, Arkin A, Ross J. Determination of causal connectivities of species in reaction networks. PNAS 2002;99(9):5816-5821.
-
(2002)
PNAS
, vol.99
, Issue.9
, pp. 5816-5821
-
-
Vance, W.1
Arkin, A.2
Ross, J.3
-
5
-
-
0037452796
-
Experimental test of a method for determining causal connectivities of species in reactions
-
Torralba AS, Yu K, Shen P, et al. Experimental test of a method for determining causal connectivities of species in reactions. PNAS 2003;100(4):1494-1498.
-
(2003)
PNAS
, vol.100
, Issue.4
, pp. 1494-1498
-
-
Torralba, A.S.1
Yu, K.2
Shen, P.3
-
9
-
-
0035125986
-
In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data
-
Edwards JS, Ibarra RU, Palsson BO. In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data. Nat Biotechnol 2001:19:125-130.
-
(2001)
Nat Biotechnol
, vol.19
, pp. 125-130
-
-
Edwards, J.S.1
Ibarra, R.U.2
Palsson, B.O.3
-
11
-
-
25144492110
-
Approximative kinetic formats used in metabolic network modeling
-
Heijnen JJ. Approximative kinetic formats used in metabolic network modeling. Biotechnol Bioeng 2005;91(5):534-545.
-
(2005)
Biotechnol Bioeng
, vol.91
, Issue.5
, pp. 534-545
-
-
Heijnen, J.J.1
-
12
-
-
0033764285
-
The challenges of in silico biology
-
Palsson B. The challenges of in silico biology. Nat Biotechnol 2000;18: 1147-1150.
-
(2000)
Nat Biotechnol
, vol.18
, pp. 1147-1150
-
-
Palsson, B.1
-
13
-
-
0034995375
-
Complex biology with no parameters
-
Bailey JE. Complex biology with no parameters. Nat Biotechnol 2001;19: 503-504.
-
(2001)
Nat Biotechnol
, vol.19
, pp. 503-504
-
-
Bailey, J.E.1
-
14
-
-
0031933027
-
Mathematical modeling and analysis in biochemical engineering: Past accomplishments and future opportunities
-
Bailey JE. Mathematical modeling and analysis in biochemical engineering: Past accomplishments and future opportunities. Biotechnol Prog 1998; 14:8-20.
-
(1998)
Biotechnol Prog
, vol.14
, pp. 8-20
-
-
Bailey, J.E.1
-
15
-
-
0035953990
-
Application of genetic algorithm to chemical kinetics: Systematic determination of reaction mechanism and rate coefficients for a complex reaction network
-
Tsuchiya M, Ross J. Application of Genetic Algorithm to Chemical Kinetics: Systematic Determination of Reaction Mechanism and Rate Coefficients for a Complex Reaction Network. J Phys Chem A 2001;105(16):4052-4058.
-
(2001)
J Phys Chem A
, vol.105
, Issue.16
, pp. 4052-4058
-
-
Tsuchiya, M.1
Ross, J.2
-
16
-
-
0030848624
-
A test case of correlation metric construction of a reaction pathway from measurements
-
Arkin A, Shen P, Ross JA. A Test Case of Correlation Metric Construction of a Reaction Pathway from Measurements. Science 1997;277(5330): 1275-1279.
-
(1997)
Science
, vol.277
, Issue.5330
, pp. 1275-1279
-
-
Arkin, A.1
Shen, P.2
Ross, J.A.3
-
17
-
-
0343471961
-
In vivo analysis of metabolic dynamics in Saccharomyces cerevisiae. I. Experimental observations
-
Theobald U, Mailinger W, Baltes M, et al. In vivo analysis of metabolic dynamics in Saccharomyces cerevisiae. I. Experimental observations. Biotechnol Bioeng 1997;55:305-316.
-
(1997)
Biotechnol Bioeng
, vol.55
, pp. 305-316
-
-
Theobald, U.1
Mailinger, W.2
Baltes, M.3
-
18
-
-
0035923330
-
Improved rapid sampling for in vivo kinetics of intracellular metabolites in Saccharomyces cerevisiae
-
Lange HC, Eman M, van Zuijlen G, et al. Improved rapid sampling for in vivo kinetics of intracellular metabolites in Saccharomyces cerevisiae. Biotechnol Bioeng 2001;75(4):406-415.
-
(2001)
Biotechnol Bioeng
, vol.75
, Issue.4
, pp. 406-415
-
-
Lange, H.C.1
Eman, M.2
Van Zuijlen, G.3
-
19
-
-
7044270594
-
Analysis of in vivo kinetics of glycolysis in aerobic Saccharomyces cerevisiae by application of glucose and ethanol pulses
-
Visser D, van Zuylen GA, van Dam JC, et al. Analysis of in vivo kinetics of glycolysis in aerobic Saccharomyces cerevisiae by application of glucose and ethanol pulses. Biotechnol Bioeng 2004;88(2):157-167.
-
(2004)
Biotechnol Bioeng
, vol.88
, Issue.2
, pp. 157-167
-
-
Visser, D.1
Van Zuylen, G.A.2
Van Dam, J.C.3
-
20
-
-
0033884960
-
Response theory for
-
random channel kinetics in complex systems. Application to lifetime distributions of active intermediates
-
Vlad MO, Morán FY, Ross J. Response theory for random channel kinetics in complex systems. Application to lifetime distributions of active intermediates. Physica A 2000;278:504-525.
-
(2000)
Physica A
, vol.278
, pp. 504-525
-
-
Vlad, M.O.1
Morán, F.Y.2
Ross, J.3
-
21
-
-
2442511156
-
Response experiments for nonlinear systems with application to reaction kinetics and genetics
-
Vlad MO, Arkin A, Ross J. Response experiments for nonlinear systems with application to reaction kinetics and genetics. PNAS 2004;101(19): 7223-7228.
-
(2004)
PNAS
, vol.101
, Issue.19
, pp. 7223-7228
-
-
Vlad, M.O.1
Arkin, A.2
Ross, J.3
-
23
-
-
84900106313
-
-
US National Application Number: 10/2 222 029 International Application Number: PCT/ GB2002/003
-
Tan P, Selvarajoo K. In silico Modelling of Biochemical Pathways. US National Application Number: 10/222 029 International Application Number: PCT/ GB2002/003, 2002.
-
(2002)
Silico Modelling of Biochemical Pathways
-
-
Tan, P.1
Selvarajoo, K.2
-
24
-
-
15944393854
-
An evolutionary approach to the automatic generation of mathematical models
-
Swain AK, Morris AS. An evolutionary approach to the automatic generation of mathematical models. Appl Soft Comput 2003;3(1):1-21.
-
(2003)
Appl Soft Comput
, vol.3
, Issue.1
, pp. 1-21
-
-
Swain, A.K.1
Morris, A.S.2
-
25
-
-
17044395470
-
Reverse engineering of biochemical equations from time-course data by means of genetic programming
-
Sugimoto M, Kikuchi S, Tomita M. Reverse engineering of biochemical equations from time-course data by means of genetic programming. Biosystems 2005;80(2):155-164.
-
(2005)
Biosystems
, vol.80
, Issue.2
, pp. 155-164
-
-
Sugimoto, M.1
Kikuchi, S.2
Tomita, M.3
-
26
-
-
0030079713
-
Chemical laser modelling with genetic algorithms
-
Carroll DA. Chemical laser modelling with genetic algorithms. AIAA 1996;34(2):338-346.
-
(1996)
AIAA
, vol.34
, Issue.2
, pp. 338-346
-
-
Carroll, D.A.1
-
27
-
-
0042693078
-
Advantages of external periodic events to the evolution of biochemical oscillatory reactions
-
Tsuchiya M, Ross J. Advantages of external periodic events to the evolution of biochemical oscillatory reactions. PNAS 2003;100(17):9691-9695.
-
(2003)
PNAS
, vol.100
, Issue.17
, pp. 9691-9695
-
-
Tsuchiya, M.1
Ross, J.2
-
29
-
-
0037174670
-
Network motifs: Simple building blocks of complex networks
-
Milo R, Shen-Orr S, Itzkovitz S, et al. Network motifs: simple building blocks of complex networks. Science 2002;298(5594):824-827.
-
(2002)
Science
, vol.298
, Issue.5594
, pp. 824-827
-
-
Milo, R.1
Shen-Orr, S.2
Itzkovitz, S.3
-
30
-
-
0142151385
-
Overcoming technical variation and biological variation in quantitative proteomics
-
Molloy MP, Brzezinski EE, Hang J, et al. Overcoming technical variation and biological variation in quantitative proteomics. Proteomics 2003;3:1912-1919.
-
(2003)
Proteomics
, vol.3
, pp. 1912-1919
-
-
Molloy, M.P.1
Brzezinski, E.E.2
Hang, J.3
-
31
-
-
32344431844
-
Discovering differential activation machinery of the Toll-like receptor 4 signaling pathways in MyD88 knockouts
-
Selvarajoo K. Discovering differential activation machinery of the Toll-like receptor 4 signaling pathways in MyD88 knockouts. FEBS Lett 2006;580(5); 1457-1464.
-
(2006)
FEBS Lett
, vol.580
, Issue.5
, pp. 1457-1464
-
-
Selvarajoo, K.1
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