Induction kinetics of aerobic toluene degradation as a function of carbon starvation history

Process Biochemistry

Volumn 43, Issue 12, 2008, Pages 1345-1351

  Park, Joonhong ^a   Lang, John ^b,e   Thamaraiselvi, Kaliannan ^a,c   Kukor, Jerome J ^d   Abriola, Linda M ^e  

^a Yonsei University   (South Korea)

^b UNIVERSITY OF MICHIGAN   (United States)

^c BHARATHIDASAN UNIVERSITY   (India)

^d RUTGERS UNIVERSITY   (United States)

^e Tufts University   (United States)

Author keywords

Biodegradation modeling; Bioremediation; Carbon starvation; Induction kinetics; Porous media; Toluene monooxygenase

Indexed keywords

BIOCHEMISTRY; BIOREMEDIATION; CARBON; CONCENTRATION (PROCESS); DEGRADATION; FULLERENES; GROUNDWATER; HYDROGEOLOGY; MICROBIOLOGY; POROUS MATERIALS; REFINING; TOLUENE;

CARBON STARVATION; CARBON STARVATIONS; CONTINUOUS; INDUCTION KINETICS; POROUS MEDIA; POROUS MEDIUMS; RALSTONIA PICKETTII; REFINED MODELS; STARVED CELLS; TRANSIENT PHASES;

BIODEGRADATION;

RALSTONIA PICKETTII; TOBACCO STUNT VIRUS;

EID: 54949104324     PISSN: 13595113     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.procbio.2008.08.004     Document Type: Article

References (37)

1. Arciero D., Vanneli T., Logan M., and Hooper A.B. Degradation of trichloroethylene by the ammonia-oxidizing bacterium Nitrosomonas europea. Biochem Biophys Res Commun 159 (1989) 640-643
2. Zylstra G.J., Wackett L.P., and Gibson D.T. Trichloroethylene degradation by Escherichia coli containing the cloned Pseudomonas putida F1 toluene dioxygenase genes. Appl Environ Microbiol 55 (1989) 3162-3166
3. Folsom B.R., Chapman P.J., and Pritchard P.H. Phenol and trichloroethylene degradation by Pseudomonas cepacia G4: kinetics and interactions between substrates. App Environ Microbiol 56 (1990) 1279-1285
4. Fox B.G., Borneman J.G., Wackett L.P., and Lipscomb J.D. Haloalkene oxidation by the soluble methane monooxygenase from Methylosinus trichosporium OB3b: mechanistic and environmental implications. Biochemistry 29 (1990) 6419-6427
5. Whited G.M., and Gibson D.T. Toluene-4-monooxygenase, a three-component enzyme system that catalyzes the oxidation of toluene to p-cresol in Pseudomonas mendocina KR1. J Bacteriol 173 (1991) 3010-3016
6. Ensign S.A., Hyman M.R., and Arp D.J. Cometabolic degradation of chlorinated alkenes by alkene monooxygenase in a propylene-grown Xanthobacter strain. Appl Environ Microbiol 58 (1992) 3038-3304
7. Heald S., and Jenkins R.O. Trichloroethylene removal and oxidation toxicity mediated by toluene dioxygenase of Pseudomonas putida. Appl Environ Microbiol 60 (1994) 4634-4637
8. Malachowsky K.J., Phelps T.J., Teboli A.B., Minnikin D.E., and White D.C. Aerobic mineralization of trichloroethylene, vinyl chloride, and aromatic compounds by Rhodococcus species. Appl Environ Microbiol 60 (1994) 542-548
9. Olsen R.H., Kukor J.J., and Kaphammer B. A novel toluene-3monooxygenase pathway cloned from Pseudomonas pickettii PKO1. J Bacteriol 176 (1994) 3749-3756
10. Lontoh S., and Semrau J.D. Methane and trichloroethylene degradation by Methylosinus trichosporium OB3b expressing particulate methane monoxygenase. Appl Environ Microbiol 64 (1998) 1106-1114
11. Mars A.E., Houwing J., Dolfing J., and Janssen D.B. Degradation of toluene and trichloroethylene by Burkholderia cepacia G4 in growth-limited fed-batch culture. Appl Environ Microbiol 62 (1996) 886-891
12. Park J., Kukor J.J., and Abriola L.M. Characterization of the adaptive response to trichloroethylene-mediated stresses in Ralstonia pickettii PKO1. Appl Environ Microbiol 68 (2002) 5231-5240
13. Hopkins G.D., and McCarty P.L. Field evaluation of in situ aerobic cometabolism of trichloroethylene and three dichloroethylene isomers using phenol and toluene as the primary substrates. Environ Sci Technol 29 (1995) 1628-1637
14. McCarty P.L., Goltz M.N., Hopkins G.D., Dolan M.E., Allan J.P., Kawakami B.T., et al. Full-scale evaluation of in situ cometabolic degradation of trichloroethylene in groundwater through toluene injection. Environ Sci Technol 32 (1998) 88-100
15. Morita R.Y. Bioavailability of energy and the starvation state. Starvation in bacteria (1993), Plenum Press, New York p. 1-24
16. Nystrom T. Oxidation of bacterial proteome in response to starvation. Methods Biochem Anal 49 (2006) 89-95
17. Zinser E.R., and Kolter R. Mutations enhancing amino acid catabolism confer a growth advantage in stationary phase. J Bacteriol 181 (1999) 5800-5807
18. Matin A. The molecular basis of carbon-starvation-induced general resistance in Escherichia coli. Mol Microbiol 5 (1991) 3-10
19. Zhi-Wu W., Yong L., Jia-Qi Z., and Yu L. The influence of short-term starvation on aerobic granules. Process Biochem 41 (2006) 2373-2378
20. Khleifat K.M. Biodegradation of phenol by Ewingella americana: effect of carbon starvation and some growth conditions. Process Biochem 41 (2006) 2010-2016
21. Aakra A., Hesselsoe M., and Bakken L.R. Surface attachment of ammonia-oxidising bacteria in soil. Microb Ecol 39 (2000) 222-235
22. Lehman R.M., Colwell F.S., and Bala G.A. Attached and unattached microbial communities in a simulated basalt aquifer under fracture and porous-flow conditions. Appl Environ Microbiol 67 (2001) 2799-2809
23. Ghiorse W.C., and Wilson J.T. Microbial ecology of the terrestrial subsurface. J Adv Appl Microbiol 33 (1988) 107-172
24. Alvarez-Cohen L., and McCarty P.L. Effects of toxicity, aeration, and reductant supply on trichloroethylene transformation by a mixed methanotrophic culture. Appl Environ Microbiol 57 (1991) 228-235
25. Henry S.M., and Grbic-Galic D. Influence of endogenous and exogenous electron donors and trichloroethylene oxidation toxicity on trichloroethylene oxidation by methanotrophic cultures from a groundwater aquifer. Appl Environ Microbiol 57 (1991) 236-244
26. Jenkins R.O., and Heald S.C. Stability of toluene oxidation by Pseudomonas putida under nutrient deprivation. Appl Microbiol Biotechnol 46 (1996) 388-392
27. Johnson D.R., Park J., Kukor J.J., and Abriola L.M. Effect of carbon starvation on toluene degradation activity by toluene monooxygenase-expressing bacteria. Biodegradation 17 (2006) 437-445
28. Semprini L., and McCarty P.L. Comparison between model simulations and field results for in-situ biorestoration of chlorinated aliphatics: Part 2. Cometabolic transformations. Ground Water 30 (1992) 37-44
29. Park J., Chen Y.M., Kukor J.J., and Abriola L.M. Influence of substrate exposure history on biodegradation in a porous medium. J Contam Hydrol 51 (2001) 233-256
30. Leahy J.G., and Olsen R.H. Kinetics of toluene degradation by toluene-oxidizing bacteria as a function of oxygen concentration, and the effect of nitrate. FEMS Microbiol Ecol 23 (1997) 23-30
31. Olsen R.H., and Hansen J. Evolution and utility of a Pseudomonas aeruginosa drug resistance factor. J Bacteriol 125 (1976) 837-844
32. Weber Jr. W.J., and DiGiano F.A. Process dynamics in environmental systems (1996), John Wiley and Sons, New York pp. 331-5
33. Byrne A.M., and Olsen R.H. Cascade regulation of the toluene-3-monooxygenase operon (tbuA1UBVA2C) of Burkholderia pickettii PKO1: role of the rbuA1 promotor (PtbuA1) in the expression of its cognate activator, TbuT. J Bacteriol 178 (1996) 6327-6337
34. Park J., Malinverni J., Adriaens P., and Kukor J.J. Quantitative structure-activity relationship (QSAR) analysis of aromatic effector specificity in NtrC-like transcriptional activators from aromatic oxidizing bacteria. FEMS Microbiol Lett 224 (2003) 45-52
35. Link-field T.G., Suflita J.M., and Tiedje J.M. Characterization of the acclimation period before anaerobic dehalogenation of halobenzoates. Appl Environ Microbiol 55 (1989) 2773-2778
36. de Smet M.J., Kingma J., and Witholt B. The effect of toluene on the structure and permeability of the outer and cytoplasmic membranes of Escherichia coli. Biochim Biphys Acta 506 (1978) 64-80
37. Park J. Influence of substrate exposure history on biodegradation in porous media by Ralstonia pickettii PKO1. Ph.D. Dissertation. Ann Arbor: University of Michigan, 2002.