A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm

BMC Bioinformatics

Volumn 9, Issue , 2008, Pages

  Podell, Sheila ^a   Gaasterland, Terry ^a   Allen, Eric E ^a,b  

^a UNIVERSITY OF CALIFORNIA SAN DIEGO   (United States)

^b UNIVERSITY OF CALIFORNIA SAN DIEGO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; BACTERIAL GENOMES; COMPUTATIONAL DEMANDS; HORIZONTAL GENE TRANSFER; PHYLOGENETIC TREES; PROBABILITY INDEX; PROTEIN FUNCTIONS; RELATIONAL DATABASE;

ALGORITHMS; AMINO ACIDS; DATABASE SYSTEMS; GENE TRANSFER; PROTEINS; QUERY PROCESSING; SEARCH ENGINES; TOOLS;

GENES;

ANALYTIC METHOD; ARCHAEBACTERIUM; ARTICLE; BACTERIAL GENOME; COMPUTER INTERFACE; COMPUTER PREDICTION; COMPUTER PROGRAM; DARKHORSE ALGORITHM; DATA ANALYSIS SOFTWARE; GENETIC ALGORITHM; GENETIC DATABASE; GENOME ANALYSIS; HORIZONTAL GENE TRANSFER; INFORMATION PROCESSING; INFORMATION RETRIEVAL; INTERMETHOD COMPARISON; LINEAGE PROBABILITY INDEX; PHYLOGENETIC TREE; PHYLOGENY; SCORING SYSTEM; ALGORITHM; AMINO ACID SEQUENCE; ARCHAEAL GENOME; ARTIFICIAL NEURAL NETWORK; DNA BASE COMPOSITION; DNA SEQUENCE; GENETICS; MOLECULAR EVOLUTION; PROBABILITY;

ARCHAEA; BACTERIA (MICROORGANISMS);

PROTEIN;

ALGORITHMS; AMINO ACID SEQUENCE; BASE COMPOSITION; DATABASES, GENETIC; EVOLUTION, MOLECULAR; GENE TRANSFER, HORIZONTAL; GENOME, ARCHAEAL; GENOME, BACTERIAL; NEURAL NETWORKS (COMPUTER); PHYLOGENY; PROBABILITY; PROTEINS; SEQUENCE ANALYSIS, DNA; USER-COMPUTER INTERFACE;

EID: 54949102400     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-9-419     Document Type: Article

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