Analysis of the protein expression profiling during rice callus differentiation under different plant hormone conditions

Plant Molecular Biology

Volumn 68, Issue 6, 2008, Pages 597-617

  Yin, Lan ^a,b   Lan, Ying ^a   Zhu, Lihuang ^a  

^a INSTITUTE OF GENETICS AND DEVELOPMENTAL BIOLOGY   (China)

^b UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

Author keywords

Callus differentiation; Organic regeneration; Plant hormone; Protein expression patterns

Indexed keywords

PHYTOHORMONE; VEGETABLE PROTEIN;

ARTICLE; MASS SPECTROMETRY; METABOLISM; PHYSIOLOGY; POLYMERASE CHAIN REACTION; RICE; SCANNING ELECTRON MICROSCOPY; TANDEM MASS SPECTROMETRY; TWO DIMENSIONAL GEL ELECTROPHORESIS;

ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; MICROSCOPY, ELECTRON, SCANNING; ORYZA SATIVA; PLANT GROWTH REGULATORS; PLANT PROTEINS; POLYMERASE CHAIN REACTION; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; TANDEM MASS SPECTROMETRY;

LILIOPSIDA;

EID: 54849425111     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11103-008-9395-4     Document Type: Article

References (39)

1. K Abe S Arai 1985 Purification of a cysteine proteinase-inhibitor from rice, Oryza sativa L. japonica Agric Biol Chem 49 3349 3350
2. T Abe Y Futsuhara 1984 Varietal difference of plant regeneration from root callus tissues in rice Jpn J Breed 34 147 155
3. T Abe Y Futsuhara 1986 Genotypic variability for callus formation and plant regeneration in rice (Oryza sativa L.) Theor Appl Genet 72 3 10 10.1007/BF00261446
4. K Abe Y Emori H Kondo K Suzuki S Arai 1987 Molecular cloning of a cysteine proteinase inhibitor of rice (Oryzacystatin) J Biol Chem 262 16793 16797
5. K Abe H Kondo S Arai 1987 Purification and properties of a cysteine proteinase from germinating rice seeds Agric Biol Chem 51 1509 1514
6. T Aoyama NH Chua 1997 A glucocorticoid-mediated transcriptional induction system in transgenic plants Plant J 11 605 612 10.1046/j.1365-313X.1997. 11030605.x
7. DC Baulcombe AK Huttly RA Martienssen RF Barker MG Jarvis 1987 A novel wheat α-amylase gene (α-Amy3) Mol Gen Genet 209 33 40 10.1007/BF00329833
8. C Branca G Bucci P Domiano A Ricci A Torelli M Bassi 1991 Auxin structure and activity on tomato morphogenesis in vitro and pea stem elongation Plant Cell Tissue Organ Cult 24 105 114 10.1007/BF00039738
9. Burkhardt P (1996) Genetic engineering towards β-carotene biosynthesis in rice (Oryza sativa L.) endosperm. DNS dissertation, Swiss Federal Institute of Technology, Zurich, Switzerland
10. L Chen S Zhang RN Beachy CM Fauquet 1998 A protocol for consistent, large scale production of fertile transgenic rice plants Plant Cell Rep 18 25 31 10.1007/s002990050526
11. Davies PJ (1987) The plant hormones: their nature, occurrence and functions. In: Davies PJ (ed) Plant hormones and their role in growth and development. Martinus Nijboff Publishers, The Netherlands, pp 1-11
12. J Friml E Benková I Blilou J Wisniewska T Hamann K Ljung 2002 AtPIN4 mediates sink-driven auxin gradients and root patterning in Arabidopsis Cell 108 661 673 10.1016/S0092-8674(02)00656-6
13. MD Gale CN Law AJ Chojecki RA Kempton 1983 Genetic control of alpha-amylase production in wheat Theor Appl Genet 64 309 316 10.1007/BF00274170
14. SA Goff D Ricke TH Lan G Presting R Wang M Dunn 2002 A draft sequence of the rice genome (Oryza sativa L. ssp. Japonica) Science 296 92 100 10.1126/science.1068275
15. N Huang N Koizumi S Reinl RL Rodriguez 1990 Structural organization and differential expression of rice α-amylase genes Nucleic Acids Res 18 7007 7013 10.1093/nar/18.23.7007
16. International Rice Genome Sequencing Project 2005 The map-based sequence of the rice genome Nature 436 793 800 10.1038/nature03895
17. JV Jacobsen TJ Higgins 1982 Characterization of the α-amylases synthesized by aleurone layers of Himalaya barley in response to gibberellic acid Plant Physiol 70 1647 1653
18. H Kato T Minamikawa 1996 Identification and characterization of a rice cysteine endopeptidase that digests glutelin Eur J Biochem 239 310 316 10.1111/j.1432-1033.1996.0310u.x
19. S Komatsu N Tanaka 2004 Rice proteome analysis: a step toward functional analysis of the rice genome Proteomics 4 938 949
20. H Kondo K Abe I Nishimura H Watanabe Y Emori S Arai 1990 Two distinct cystatin species in rice seeds with different specificities against cysteine proteinases J Biol Chem 265 15832 15837
21. T Kunkel QW Niu YS Chan NH Chua 1999 Inducible isopentenyl transferase as a high-efficiency marker for plant transformation Nat Biotechnol 17 916 919 10.1038/12914
22. Mineo L (1990) Plant tissue culture techniques. In: Proceedings of the eleventh workshop/conference of the Association for Biology Laboratory Education (ABLE), 195 p
23. T Mitsui J Yamaguchi T Akazawa 1996 Physicochemical and serological characterization of rice α- amylase isoforms and identification of their corresponding genes Plant Physiol 110 1395 1404 10.1104/pp.110.4.1395
24. D Mohnen S Eberhard V Marfa N Doubrava P Toubart DJ Gollin 1990 The control of root, vegetative shoot and flower morphogenesis in tobacco thin cell-layer explants (TCLs) Development 108 191 201
25. A Nordstrom P Tarkowski D Tarkowska R Norbaek C Astot K Dolezal 2004 Auxin regulation of cytokinin biosynthesis in Arabidopsis thaliana: a factor of potential importance for auxin-cytokinin-regulated development Proc Natl Acad Sci USA 101 8039 8044 10.1073/pnas.0402504101
26. V Rostogi A Oaks 1986 Hydrolysis of storage proteins in barley endosperms Plant Physiol 81 901 906
27. M Roy RK Jain JS Rohila R Wu 2000 Production of agronomically superior transgenic rice plants using Agrobacterium-transformation methods: present status and future perspectives Curr Sci 79 954 960
28. H Sakai T Aoyama A Oka 2000 Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators Plant J 24 703 711 10.1046/j.1365-313x. 2000.00909.x
29. H Sakai T Honma T Aoyama S Sato T Kato S Tabata 2001 ARR1, a transcription factor for genes immediately responsive to cytokinins Science 294 1519 1521 10.1126/science.1065201
30. F Skoog CO Miller 1957 Chemical regulation of growth and organ formation in plant tissues cultured in vitro Symp Soc Exp Biol 11 118 131
31. AC Smigocki LD Owens 1989 Cytokinin-to-auxin ratios and morphology of shoots and tissues transformed by a chimeric isopentenyl transferase gene Plant Physiol 91 808 811
32. BR Thomas RL Rodriguez 1994 Metabolite signals regulate gene expression and source/sink relations in cereal seedlings Plant Physiol 106 1235 1239
33. Ting IP (1982) Plant physiology. Addison-Wesley, Reading, Massachusetts
34. EJM Van Damme WJ Peumans A Barre P Rougé 1998 Plant lectins: a composite of several distinct families of structurally and evolutionary related proteins with diverse biological roles Crit Rev Plant Sci 17 575 692 10.1016/S0735-2689(98)00365-7
35. H Watanabe K Abe Y Emori H Hosoyama S Arai 1991 Molecular cloning and gibberellin-induced expression of multiple cysteine proteinases of rice seeds (Oryzains) J Biol Chem 266 16897 16902
36. T Werner V Motyka V Laucou R Smets HV Onckelen T Schmülling 2003 Cytokinin-deficient transgenic arabidopsis plants show multiple developmental alterations indicating opposite functions of cytokinins in the regulation of shoot and root meristem activity Plant Cell 15 2532 2550 10.1105/tpc.014928
37. M Yamaguchi H Kato S Yoshida S Yamamura H Uchimiya M Umeda 2003 Control of in vitro organogenesis by cyclin-dependent kinase activities in plants Proc Natl Acad Sci USA 100 8019 8023 10.1073/pnas.1332637100
38. L Yin Y Tao K Zhao J Shao X Li G Liu 2007 Proteomic and transcriptional analysis of rice mature seed-derived callus differentiation Proteomics 7 755 768 10.1002/pmic.200600611
39. J Yu S Hu J Wang GK Wong S Li B Liu 2002 A draft sequence of the rice genome (Oryza sativa L. ssp. indica) Science 296 79 92 10.1126/science.1068037