메뉴 건너뛰기




Volumn 17, Issue 21, 2008, Pages 4597-4607

Geostatistical genetic analysis for inferring the dispersal pattern of a partially clonal species: Example of the chestnut blight fungus

Author keywords

Clonal lineages; Cryphonectria parasitica; Forest pathogenic fungus; Intrahaploid mating; Isolation by distance; Spatial genetic structure; Spore dispersal

Indexed keywords

FUNGAL DNA;

EID: 54849422614     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2008.03941.x     Document Type: Article
Times cited : (29)

References (55)
  • 1
    • 0000847921 scopus 로고    scopus 로고
    • Indices of multilocus linkage disequilibrium
    • Agapow PM, Burt A (2001) Indices of multilocus linkage disequilibrium. Molecular Ecology Notes, 1, 101 102.
    • (2001) Molecular Ecology Notes , vol.1 , pp. 101-102
    • Agapow, P.M.1    Burt, A.2
  • 2
    • 24944583202 scopus 로고    scopus 로고
    • Within-population spatial genetic structure, neighbourhood size and clonal subrange in the seagrass Cymodocea nodosa
    • Alberto F, Gouveia L, Arnaud-Haond S et al 2005) Within-population spatial genetic structure, neighbourhood size and clonal subrange in the seagrass Cymodocea nodosa. Molecular Ecology, 14, 2669 2681.
    • (2005) Molecular Ecology , vol.14 , pp. 2669-2681
    • Alberto, F.1    Gouveia, L.2    Arnaud-Haond, S.3    Al, E.4
  • 3
    • 0002093428 scopus 로고
    • Chestnut blight: The classical problem of an introduced pathogen
    • Anagnostakis SL (1987) Chestnut blight: the classical problem of an introduced pathogen. Mycologia, 79, 23 37.
    • (1987) Mycologia , vol.79 , pp. 23-37
    • Anagnostakis, S.L.1
  • 4
    • 33845998160 scopus 로고    scopus 로고
    • GenClone: A computer program to analyse genotypic data, test for clonality and describe spatial clonal organization
    • Arnaud-Haond S, Belkhir K (2007) GenClone: a computer program to analyse genotypic data, test for clonality and describe spatial clonal organization. Molecular Ecology Notes, 7, 15 17.
    • (2007) Molecular Ecology Notes , vol.7 , pp. 15-17
    • Arnaud-Haond, S.1    Belkhir, K.2
  • 7
    • 0031017905 scopus 로고    scopus 로고
    • Population structure and disease development of Cryphonectria parasitica in European chestnut forests in the presence of natural hypovirulence
    • Bissegger M, Rigling D, Heiniger U (1997) Population structure and disease development of Cryphonectria parasitica in European chestnut forests in the presence of natural hypovirulence. Phytopathology, 87, 50 59.
    • (1997) Phytopathology , vol.87 , pp. 50-59
    • Bissegger, M.1    Rigling, D.2    Heiniger, U.3
  • 8
    • 33646455637 scopus 로고    scopus 로고
    • Genetic diversity of the chestnut blight fungus Cryphonectria parasitica in four French populations assessed by microsatellite markers
    • Breuillin F, Dutech C, Robin C (2006) Genetic diversity of the chestnut blight fungus Cryphonectria parasitica in four French populations assessed by microsatellite markers. Mycological Research, 110, 288 296.
    • (2006) Mycological Research , vol.110 , pp. 288-296
    • Breuillin, F.1    Dutech, C.2    Robin, C.3
  • 9
    • 0001714012 scopus 로고
    • Multilocus structure of natural populations of Hordeum spontaneum
    • Brown AHD, Feldman MW, Nevo E (1980) Multilocus structure of natural populations of Hordeum spontaneum. Genetics, 96, 523 536.
    • (1980) Genetics , vol.96 , pp. 523-536
    • Brown, A.H.D.1    Feldman, M.W.2    Nevo, E.3
  • 10
    • 0000871407 scopus 로고
    • Fitting variogram models by weighted least squares
    • Cressie N (1985) Fitting variogram models by weighted least squares. Mathematical Geology, 17, 563 586.
    • (1985) Mathematical Geology , vol.17 , pp. 563-586
    • Cressie, N.1
  • 11
    • 20144386371 scopus 로고    scopus 로고
    • Polymorphic sequence-characterized codominant loci in the chestnut blight fungus, Cryphonectria parasitica
    • Davis JE, Kubisiak TL, Milgroom MG (2005) Polymorphic sequence-characterized codominant loci in the chestnut blight fungus, Cryphonectria parasitica. Molecular Ecology Notes, 5, 195 197.
    • (2005) Molecular Ecology Notes , vol.5 , pp. 195-197
    • Davis, J.E.1    Kubisiak, T.L.2    Milgroom, M.G.3
  • 12
    • 0036028772 scopus 로고    scopus 로고
    • Evolutionary ecology of plant diseases in natural ecosystems
    • Gilbert GS (2002) Evolutionary ecology of plant diseases in natural ecosystems. Annual Review of Phytopathology, 40, 13 43.
    • (2002) Annual Review of Phytopathology , vol.40 , pp. 13-43
    • Gilbert, G.S.1
  • 13
  • 16
    • 0042549458 scopus 로고    scopus 로고
    • Genetic neighbourhood of clone structures in eelgrass meadows quantified by spatial autocorrelation of microsatellite markers
    • Hämmerli A, Reusch TBH (2003) Genetic neighbourhood of clone structures in eelgrass meadows quantified by spatial autocorrelation of microsatellite markers. Heredity, 91, 448 455.
    • (2003) Heredity , vol.91 , pp. 448-455
    • Hämmerli, A.1    Reusch, T.B.H.2
  • 17
    • 0033179890 scopus 로고    scopus 로고
    • Isolation by distance in a continuous population: Reconciliation between spatial autocorrelation analysis and population genetics models
    • Hardy OJ, Vekemans X (1999) Isolation by distance in a continuous population: reconciliation between spatial autocorrelation analysis and population genetics models. Heredity, 83, 145 154.
    • (1999) Heredity , vol.83 , pp. 145-154
    • Hardy, O.J.1    Vekemans, X.2
  • 18
    • 0036899010 scopus 로고    scopus 로고
    • SPAGeDI: A versatile computer program to analyse spatial genetic structure at the individual or population levels
    • Hardy OJ, Vekemans X (2002) SPAGeDI: a versatile computer program to analyse spatial genetic structure at the individual or population levels. Molecular Ecology Notes, 2, 618 620.
    • (2002) Molecular Ecology Notes , vol.2 , pp. 618-620
    • Hardy, O.J.1    Vekemans, X.2
  • 19
    • 33645086665 scopus 로고    scopus 로고
    • Fine-scale genetic structure and gene dispersal inferences in 10 Neotropical tree species
    • Hardy OJ, Maggia L, Bandou E et al 2006) Fine-scale genetic structure and gene dispersal inferences in 10 Neotropical tree species. Molecular Ecology, 15, 559 571.
    • (2006) Molecular Ecology , vol.15 , pp. 559-571
    • Hardy, O.J.1    Maggia, L.2    Bandou, E.3    Al, E.4
  • 22
    • 0033752863 scopus 로고    scopus 로고
    • Genetic structure of newly established populations of Cryphonectria parasitica
    • Hoegger PJ, Rigling D, Holdenrieder O, Heiniger U (2000) Genetic structure of newly established populations of Cryphonectria parasitica. Mycological Research, 104, 1108 1116.
    • (2000) Mycological Research , vol.104 , pp. 1108-1116
    • Hoegger, P.J.1    Rigling, D.2    Holdenrieder, O.3    Heiniger, U.4
  • 24
    • 34248197050 scopus 로고    scopus 로고
    • Fifty-three polymorphic microsatellite loci in the chestnut blight fungus, Cryphonectria parasitica
    • Kubisiak TL, Dutech C, Milgroom MG (2007) Fifty-three polymorphic microsatellite loci in the chestnut blight fungus, Cryphonectria parasitica. Molecular Ecology Notes, 7, 428 432.
    • (2007) Molecular Ecology Notes , vol.7 , pp. 428-432
    • Kubisiak, T.L.1    Dutech, C.2    Milgroom, M.G.3
  • 26
    • 0029188083 scopus 로고
    • Spatial genetic structure of tropical understorey shrub, Psychotria officinalis (Rubiaceae)
    • Loiselle BA, Sork VL, Nason J, Graham C (1995) Spatial genetic structure of tropical understorey shrub, Psychotria officinalis (Rubiaceae). American Journal of Botany, 82, 1420 1425.
    • (1995) American Journal of Botany , vol.82 , pp. 1420-1425
    • Loiselle, B.A.1    Sork, V.L.2    Nason, J.3    Graham, C.4
  • 28
    • 3543150179 scopus 로고    scopus 로고
    • Mixed mating in natural populations of the chestnut blight fungus, Cryphonectria parasitica
    • Marra RE, Cortesi P, Bissegger M, Milgroom MG (2004) Mixed mating in natural populations of the chestnut blight fungus, Cryphonectria parasitica. Heredity, 93, 189 195.
    • (2004) Heredity , vol.93 , pp. 189-195
    • Marra, R.E.1    Cortesi, P.2    Bissegger, M.3    Milgroom, M.G.4
  • 29
    • 0034974870 scopus 로고    scopus 로고
    • The mating system of the fungus Cryphonectria parasitica: Selfing and self-incompatibility
    • Marra RE, Milgroom MG (2001) The mating system of the fungus Cryphonectria parasitica: selfing and self-incompatibility. Heredity, 86, 134 143.
    • (2001) Heredity , vol.86 , pp. 134-143
    • Marra, R.E.1    Milgroom, M.G.2
  • 31
  • 32
    • 33644701390 scopus 로고    scopus 로고
    • Heterokaryon formation and parasexual recombination between vegetatively incompatible lineages in a population of the chestnut blight fungus, Cryphonectria parasitica
    • McGuire IC, Davis JE, Double ML et al 2005) Heterokaryon formation and parasexual recombination between vegetatively incompatible lineages in a population of the chestnut blight fungus, Cryphonectria parasitica. Molecular Ecology, 14, 3657 3669.
    • (2005) Molecular Ecology , vol.14 , pp. 3657-3669
    • McGuire, I.C.1    Davis, J.E.2    Double, M.L.3    Al, E.4
  • 33
    • 0029392439 scopus 로고
    • Spatial analysis of nuclear and mitochondrial RFLP genotypes in populations of the chestnut blight fungus, Cryphonectria parasitica
    • Milgroom MG, Lipari SE (1995) Spatial analysis of nuclear and mitochondrial RFLP genotypes in populations of the chestnut blight fungus, Cryphonectria parasitica. Molecular Ecology, 4, 633 642.
    • (1995) Molecular Ecology , vol.4 , pp. 633-642
    • Milgroom, M.G.1    Lipari, S.E.2
  • 34
    • 0000021698 scopus 로고
    • Comparison of genetic diversity in the chestnut blight fungus, Cryphonectria (Endothia) parasitica, from China and the United States
    • Milgroom MG, Lipari S, Wang KR (1992) Comparison of genetic diversity in the chestnut blight fungus, Cryphonectria (Endothia) parasitica, from China and the United States. Mycological Research, 96, 1114 1120.
    • (1992) Mycological Research , vol.96 , pp. 1114-1120
    • Milgroom, M.G.1    Lipari, S.2    Wang, K.R.3
  • 37
    • 0026471272 scopus 로고
    • Biological control of chestnut blight: An example of virus-mediated attenuation of fungal pathogenesis
    • Nuss DL (1992) Biological control of chestnut blight: an example of virus-mediated attenuation of fungal pathogenesis. Microbiological Reviews, 56, 561 576.
    • (1992) Microbiological Reviews , vol.56 , pp. 561-576
    • Nuss, D.L.1
  • 38
    • 22944492730 scopus 로고    scopus 로고
    • Hypovirulence: Mycoviruses at the fungal-plant interface
    • Nuss DL (2005) Hypovirulence: mycoviruses at the fungal-plant interface. Nature Reviews Microbiology, 3, 632 642.
    • (2005) Nature Reviews Microbiology , vol.3 , pp. 632-642
    • Nuss, D.L.1
  • 40
    • 0032822443 scopus 로고    scopus 로고
    • Differentiating between clonal growth and limited gene flow using spatial autocorrelation of microsatellites
    • Reusch TBH, Hukriede W, Stam WT, Olsen JL (1999) Differentiating between clonal growth and limited gene flow using spatial autocorrelation of microsatellites. Heredity, 83, 120 126.
    • (1999) Heredity , vol.83 , pp. 120-126
    • Reusch, T.B.H.1    Hukriede, W.2    Stam, W.T.3    Olsen, J.L.4
  • 41
    • 0002062430 scopus 로고    scopus 로고
    • GeoR: A package for geostatistical analysis
    • Ribeiro PJ, Diggle PJ (2001) geoR: a package for geostatistical analysis. R-NEWS, 1, 14 18.
    • (2001) R-NEWS , vol.1 , pp. 14-18
    • Ribeiro, P.J.1    Diggle, P.J.2
  • 42
    • 0028908675 scopus 로고
    • Ultraviolet light-induced heterokaryon formation and parasexuality in Cryphonectria parasitica
    • Rizwana R, Powell WA (1995) Ultraviolet light-induced heterokaryon formation and parasexuality in Cryphonectria parasitica. Experimental Mycology, 19, 48 60.
    • (1995) Experimental Mycology , vol.19 , pp. 48-60
    • Rizwana, R.1    Powell, W.A.2
  • 43
    • 0042482604 scopus 로고    scopus 로고
    • Chestnut blight in Europe: Diversity of Cryphonectria parasitica, hypovirulence and biocontrol
    • Robin C, Heiniger U (2001) Chestnut blight in Europe: diversity of Cryphonectria parasitica, hypovirulence and biocontrol. Forest Snow and Landscape Research, 76, 361 367.
    • (2001) Forest Snow and Landscape Research , vol.76 , pp. 361-367
    • Robin, C.1    Heiniger, U.2
  • 44
    • 0034126677 scopus 로고    scopus 로고
    • Relationship between biological control, incidence of hypovirulence, and diversity of vegetative compatibility types of Cryphonectria parasitica in France
    • Robin C, Anziani C, Cortesi P (2000) Relationship between biological control, incidence of hypovirulence, and diversity of vegetative compatibility types of Cryphonectria parasitica in France. Phytopathology, 90, 730 737.
    • (2000) Phytopathology , vol.90 , pp. 730-737
    • Robin, C.1    Anziani, C.2    Cortesi, P.3
  • 45
    • 0030888985 scopus 로고    scopus 로고
    • Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance
    • Rousset F (1997) Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance. Genetics, 145, 1219 1228.
    • (1997) Genetics , vol.145 , pp. 1219-1228
    • Rousset, F.1
  • 46
    • 0033977405 scopus 로고    scopus 로고
    • Genetic differentiation between individuals
    • Rousset F (2000) Genetic differentiation between individuals. Journal of Evolutionary Biology, 13, 58 62.
    • (2000) Journal of Evolutionary Biology , vol.13 , pp. 58-62
    • Rousset, F.1
  • 47
    • 0001431826 scopus 로고
    • Insects as carriers of virulent and cytoplasmic hypovirulent isolates of the chestnut blight fungus
    • Russin JS, Shain L, Nordin GL (1984) Insects as carriers of virulent and cytoplasmic hypovirulent isolates of the chestnut blight fungus. Journal of Economic Entomology, 77, 838 846.
    • (1984) Journal of Economic Entomology , vol.77 , pp. 838-846
    • Russin, J.S.1    Shain, L.2    Nordin, G.L.3
  • 49
    • 0033137053 scopus 로고    scopus 로고
    • Spatial autocorrelation analysis of individual multiallele and multilocus genetic structure
    • Smouse PE, Peakall R (1999) Spatial autocorrelation analysis of individual multiallele and multilocus genetic structure. Heredity, 82, 561 573.
    • (1999) Heredity , vol.82 , pp. 561-573
    • Smouse, P.E.1    Peakall, R.2
  • 50
    • 1642396359 scopus 로고    scopus 로고
    • New insights from fine-scale spatial genetic structure analyses in plant populations
    • Vekemans X, Hardy OJ (2004) New insights from fine-scale spatial genetic structure analyses in plant populations. Molecular Ecology, 13, 931 935.
    • (2004) Molecular Ecology , vol.13 , pp. 931-935
    • Vekemans, X.1    Hardy, O.J.2
  • 51
    • 17444367614 scopus 로고    scopus 로고
    • Variogram analysis of the spatial genetic structure of continuous populations using multilocus microsatellite data
    • Wagner HH, Holderegger R, Werth S et al 2005) Variogram analysis of the spatial genetic structure of continuous populations using multilocus microsatellite data. Genetics, 169, 1739 1752.
    • (2005) Genetics , vol.169 , pp. 1739-1752
    • Wagner, H.H.1    Holderegger, R.2    Werth, S.3    Al, E.4
  • 52
    • 0031440420 scopus 로고    scopus 로고
    • Genetic variability in the canker pathogen fungus, Gremmeniella abietina. 2. Fine scale investigation of the population genetic structure
    • Wang XR, Ennos RA, Szmidt AE, Hansson P (1997) Genetic variability in the canker pathogen fungus, Gremmeniella abietina. 2. Fine scale investigation of the population genetic structure. Canadian Journal of Botany-Revue Canadienne de Botanique, 75, 1460 1469.
    • (1997) Canadian Journal of Botany-Revue Canadienne de Botanique , vol.75 , pp. 1460-1469
    • Wang, X.R.1    Ennos, R.A.2    Szmidt, A.E.3    Hansson, P.4
  • 54
    • 0001024012 scopus 로고
    • Isolation by distance
    • Wright S (1943) Isolation by distance. Genetics, 28, 114 138.
    • (1943) Genetics , vol.28 , pp. 114-138
    • Wright, S.1
  • 55
    • 1942485893 scopus 로고    scopus 로고
    • The effective size of mixed sexually and asexually reproducing populations
    • Yonezawa K, Ishii T, Nagamine T (2004) The effective size of mixed sexually and asexually reproducing populations. Genetics, 166, 1529 1539.
    • (2004) Genetics , vol.166 , pp. 1529-1539
    • Yonezawa, K.1    Ishii, T.2    Nagamine, T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.