-
1
-
-
0000944228
-
Fluorescence-polarization spectrum and electronic energy transfer in tyrosine, tryptophan and related compounds
-
Weber G. Fluorescence-polarization spectrum and electronic energy transfer in tyrosine, tryptophan and related compounds. Biochem. J. 75 (1960) 335-345
-
(1960)
Biochem. J.
, vol.75
, pp. 335-345
-
-
Weber, G.1
-
2
-
-
0021891880
-
Time-resolved fluorescence of proteins
-
Beechem J.M., and Brand L. Time-resolved fluorescence of proteins. Annu. Rev. Biochem. 54 (1985) 43-71
-
(1985)
Annu. Rev. Biochem.
, vol.54
, pp. 43-71
-
-
Beechem, J.M.1
Brand, L.2
-
3
-
-
0025929570
-
Fluorescence techniques for studding protein structure
-
Eftink M.R. Fluorescence techniques for studding protein structure. Methods Biochem. Anal. 35 (1991) 127-205
-
(1991)
Methods Biochem. Anal.
, vol.35
, pp. 127-205
-
-
Eftink, M.R.1
-
5
-
-
0001943903
-
Fluorescence spectroscopy in peptide and protein analysis
-
Wiley, Chichester
-
Ladokhin A.S. Fluorescence spectroscopy in peptide and protein analysis. Encyclopedia of Analytical Chemistry (2000), Wiley, Chichester 5762-5779
-
(2000)
Encyclopedia of Analytical Chemistry
, pp. 5762-5779
-
-
Ladokhin, A.S.1
-
6
-
-
0035028745
-
Mechanisms of tryptophan fluorescence shifts in proteins
-
Vivian J.T., and Callis P.R. Mechanisms of tryptophan fluorescence shifts in proteins. Biophys. J. 80 (2001) 2093-2109
-
(2001)
Biophys. J.
, vol.80
, pp. 2093-2109
-
-
Vivian, J.T.1
Callis, P.R.2
-
7
-
-
0017883676
-
Relationship of thermal quenching of protein fluorescence to intramolecular structural mobility
-
Bushueva T.L., Busel E.P., and Burstein E.A. Relationship of thermal quenching of protein fluorescence to intramolecular structural mobility. Biochim. Biophys. Acta 534 (1978) 141-152
-
(1978)
Biochim. Biophys. Acta
, vol.534
, pp. 141-152
-
-
Bushueva, T.L.1
Busel, E.P.2
Burstein, E.A.3
-
8
-
-
0030965949
-
Tertiary structure formation at specific tryptophan side chains in the refolding of human carbonic anhydrase II
-
Jonasson P., Arosson G., Carlsson U., and Jonsson B.H. Tertiary structure formation at specific tryptophan side chains in the refolding of human carbonic anhydrase II. Biochemistry 36 (1997) 5142-5148
-
(1997)
Biochemistry
, vol.36
, pp. 5142-5148
-
-
Jonasson, P.1
Arosson, G.2
Carlsson, U.3
Jonsson, B.H.4
-
9
-
-
0032817737
-
Tryptophan mediated photoreduction of disulfide bond causes unusual fluorescence behaviour of Fusarium solani pisi cutinase
-
Prompers J.J., Hilbers C.W., and Pepermans H.A.M. Tryptophan mediated photoreduction of disulfide bond causes unusual fluorescence behaviour of Fusarium solani pisi cutinase. FEBS Lett. 456 (1999) 409-416
-
(1999)
FEBS Lett.
, vol.456
, pp. 409-416
-
-
Prompers, J.J.1
Hilbers, C.W.2
Pepermans, H.A.M.3
-
10
-
-
24044451239
-
Implication of a critical residue (Glu175) in structure and function of bacterial luciferase
-
Madvar A.R., Hosseinkhani S., Khajeh K., Ranjbar B., and Asoodeh A. Implication of a critical residue (Glu175) in structure and function of bacterial luciferase. FEBS Lett. 579 (2005) 4701-4706
-
(2005)
FEBS Lett.
, vol.579
, pp. 4701-4706
-
-
Madvar, A.R.1
Hosseinkhani, S.2
Khajeh, K.3
Ranjbar, B.4
Asoodeh, A.5
-
11
-
-
0032516433
-
Toward understanding tryptophan fluorescence in proteins
-
Chen Y., and Barkley M.D. Toward understanding tryptophan fluorescence in proteins. Biochemistry 37 (1998) 9976-9982
-
(1998)
Biochemistry
, vol.37
, pp. 9976-9982
-
-
Chen, Y.1
Barkley, M.D.2
-
12
-
-
0022419375
-
Aromatic-aromatic interaction: a mechanism of protein structure stabilization
-
Burley S.K., and Petsko G.A. Aromatic-aromatic interaction: a mechanism of protein structure stabilization. Science 229 (1985) 23-28
-
(1985)
Science
, vol.229
, pp. 23-28
-
-
Burley, S.K.1
Petsko, G.A.2
-
13
-
-
0022450133
-
Amino-aromatic interaction in proteins
-
Burley S.K., and Petsko G.A. Amino-aromatic interaction in proteins. FEBS Lett. 203 (1986) 139-143
-
(1986)
FEBS Lett.
, vol.203
, pp. 139-143
-
-
Burley, S.K.1
Petsko, G.A.2
-
14
-
-
0029779951
-
Three-dimensional structure of the immunophilin-like domain of FKBP59 in solution
-
Craescu C.T., Rouviere N., Popescu A., Cerpolini E., Lebeau M.C., Baulieu E.E., and Mispelter J. Three-dimensional structure of the immunophilin-like domain of FKBP59 in solution. Biochemistry 35 (1996) 11045-11052
-
(1996)
Biochemistry
, vol.35
, pp. 11045-11052
-
-
Craescu, C.T.1
Rouviere, N.2
Popescu, A.3
Cerpolini, E.4
Lebeau, M.C.5
Baulieu, E.E.6
Mispelter, J.7
-
15
-
-
0030909560
-
Immunosuppressor binding to theimmunophilin FKBP59 affects the local structural dynamics of a surface beta-strand: time-resolved fluorescence study
-
Rouviere N., Vincent M., Craescu C.T., and Gallay J. Immunosuppressor binding to theimmunophilin FKBP59 affects the local structural dynamics of a surface beta-strand: time-resolved fluorescence study. Biochemistry 36 (1997) 7339-7352
-
(1997)
Biochemistry
, vol.36
, pp. 7339-7352
-
-
Rouviere, N.1
Vincent, M.2
Craescu, C.T.3
Gallay, J.4
-
16
-
-
0034237284
-
Aromatic interaction in homeodomains contribute to the low quantum yield of a conserved, buried tryptophan
-
Nanda V., and Brand L. Aromatic interaction in homeodomains contribute to the low quantum yield of a conserved, buried tryptophan. Proteins 40 (2000) 112-125
-
(2000)
Proteins
, vol.40
, pp. 112-125
-
-
Nanda, V.1
Brand, L.2
-
17
-
-
0035877733
-
Aromatic amino acids are criticalfor stability of the bicoid homeodomain
-
Subramaniam V., Jovin T.M., and Rivera-Pomar R.V. Aromatic amino acids are criticalfor stability of the bicoid homeodomain. J. Biol. Chem. 276 (2001) 21506-21511
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 21506-21511
-
-
Subramaniam, V.1
Jovin, T.M.2
Rivera-Pomar, R.V.3
-
18
-
-
0029916524
-
Three hTIM mutants that provide new insights on why TIM is a dimmer
-
Mainfroid V., Terpstra P., Beauregard M., Frère J.M., Mande S.C., Hol W.G.J., Martial J.A., and Goraj K. Three hTIM mutants that provide new insights on why TIM is a dimmer. J. Mol. Biol. 257 (1996) 441-456
-
(1996)
J. Mol. Biol.
, vol.257
, pp. 441-456
-
-
Mainfroid, V.1
Terpstra, P.2
Beauregard, M.3
Frère, J.M.4
Mande, S.C.5
Hol, W.G.J.6
Martial, J.A.7
Goraj, K.8
-
19
-
-
0029954416
-
Deterministic pressure dissociation and unfolding of triosephosphate isomerasa: persistent heterogeneity of a protein dimmer
-
Rietveld A.W.M., and Ferreira S.T. Deterministic pressure dissociation and unfolding of triosephosphate isomerasa: persistent heterogeneity of a protein dimmer. Biochemistry 35 (1999) 7743-7751
-
(1999)
Biochemistry
, vol.35
, pp. 7743-7751
-
-
Rietveld, A.W.M.1
Ferreira, S.T.2
-
20
-
-
0030850229
-
Disecction of the gene of the bifunctional PGK-TIM fusion protein from the hyperthermopilic bacterium Thermotoga maritime: design and characterization of the separate triosephosphate isomerasa
-
Beaucamp N., Hofmann A., Kellerer B., and Jaenicke R. Disecction of the gene of the bifunctional PGK-TIM fusion protein from the hyperthermopilic bacterium Thermotoga maritime: design and characterization of the separate triosephosphate isomerasa. Protein Sci. 6 (1997) 2159-2165
-
(1997)
Protein Sci.
, vol.6
, pp. 2159-2165
-
-
Beaucamp, N.1
Hofmann, A.2
Kellerer, B.3
Jaenicke, R.4
-
21
-
-
0033524469
-
Unfolding of Plasmodium falciparum triosephosphate isomerase in urea and guanidinium chloride: evidence for a novel disulfide exchange reaction in a covalently cross-linked mutant
-
Gokhale R.S., Ray S.S., Balaram H., and Balaram P. Unfolding of Plasmodium falciparum triosephosphate isomerase in urea and guanidinium chloride: evidence for a novel disulfide exchange reaction in a covalently cross-linked mutant. Biochemistry 38 (1999) 423-431
-
(1999)
Biochemistry
, vol.38
, pp. 423-431
-
-
Gokhale, R.S.1
Ray, S.S.2
Balaram, H.3
Balaram, P.4
-
22
-
-
0034111423
-
The ionization of a buried glutamic acid is thermodynamically linked to the stability of Leishmania mexicana triosephosphate isomerasa
-
Lambeir M., Backmann J., Ruiz-Sanz J., Filimonov V., Nielsen J.E., Kursula I., Norledge B.V., and Wierenga R.K. The ionization of a buried glutamic acid is thermodynamically linked to the stability of Leishmania mexicana triosephosphate isomerasa. Eur. J. Biochem. 267 (2000) 2516-2524
-
(2000)
Eur. J. Biochem.
, vol.267
, pp. 2516-2524
-
-
Lambeir, M.1
Backmann, J.2
Ruiz-Sanz, J.3
Filimonov, V.4
Nielsen, J.E.5
Kursula, I.6
Norledge, B.V.7
Wierenga, R.K.8
-
23
-
-
0034733388
-
A compact monomeric intermediate identified by NMR in the denaturation of dimeric triosephosphate isomerse
-
Morgan C.J., Wilkins D.K., Smith L.J., Kawata Y., and Dobson C.M. A compact monomeric intermediate identified by NMR in the denaturation of dimeric triosephosphate isomerse. J. Mol. Biol. 300 (2000) 11-16
-
(2000)
J. Mol. Biol.
, vol.300
, pp. 11-16
-
-
Morgan, C.J.1
Wilkins, D.K.2
Smith, L.J.3
Kawata, Y.4
Dobson, C.M.5
-
24
-
-
0002882055
-
Equilibrium unfolding of yeast triosephosphate isomerase: a monomeric intermediate in guanidine-HCl and two state behaviors in urea
-
Vázquez-Contreras E., Zubillaga R., Mendoza-Hernández G., Costas M., and Fernández-Velasco D.A. Equilibrium unfolding of yeast triosephosphate isomerase: a monomeric intermediate in guanidine-HCl and two state behaviors in urea. Prot. Peptide Letters 7 (2000) 57-64
-
(2000)
Prot. Peptide Letters
, vol.7
, pp. 57-64
-
-
Vázquez-Contreras, E.1
Zubillaga, R.2
Mendoza-Hernández, G.3
Costas, M.4
Fernández-Velasco, D.A.5
-
25
-
-
0037088535
-
Unfolding of triosephosphate isomerase from Trypanosoma brucei: identification of intermediates and insight into the denaturation pathway using tryptophan mutants
-
Chánez-Cárdenas M.E., Fernández-Velasco D.A., Vázquez-Contreras E., Coria R., Saab-Rincón G., and Pérez-Montfort R. Unfolding of triosephosphate isomerase from Trypanosoma brucei: identification of intermediates and insight into the denaturation pathway using tryptophan mutants. Arch. Biochem. Biophys. 399 (2002) 117-129
-
(2002)
Arch. Biochem. Biophys.
, vol.399
, pp. 117-129
-
-
Chánez-Cárdenas, M.E.1
Fernández-Velasco, D.A.2
Vázquez-Contreras, E.3
Coria, R.4
Saab-Rincón, G.5
Pérez-Montfort, R.6
-
26
-
-
0037444807
-
Thermodynamic characterization of yeast triosephosphate isomerase refolding: insights into the interplay between function and stability as reasons for the oligomeric nature of the enzyme
-
Najera H., Costas M., and Fernández-Velasco D.A. Thermodynamic characterization of yeast triosephosphate isomerase refolding: insights into the interplay between function and stability as reasons for the oligomeric nature of the enzyme. Biochem. J. 370 (2003) 785-792
-
(2003)
Biochem. J.
, vol.370
, pp. 785-792
-
-
Najera, H.1
Costas, M.2
Fernández-Velasco, D.A.3
-
27
-
-
0346365102
-
Persistent conformational heterogeneity of triosephosphate isomerase: separation and characterization of conformational isomers in solution
-
Moreau V.H., Rietveld A.W.M., and Ferreira S.T. Persistent conformational heterogeneity of triosephosphate isomerase: separation and characterization of conformational isomers in solution. Biochemistry 42 (2003) 14831-14837
-
(2003)
Biochemistry
, vol.42
, pp. 14831-14837
-
-
Moreau, V.H.1
Rietveld, A.W.M.2
Ferreira, S.T.3
-
28
-
-
0037465762
-
Control of the reactivation kinetics of homodimeric triosephosphate isomerase from unfolded monomers
-
Zomosa-Signoret V., Hernández-Alcántara G., Reyes-Vivas H., Martínez-Martínez E., Garza-Ramos G., Pérez-Montfort R., Tuena de Gómez-Puyou M., and Gómez-Puyou A. Control of the reactivation kinetics of homodimeric triosephosphate isomerase from unfolded monomers. Biochemistry 42 (2003) 3311-3318
-
(2003)
Biochemistry
, vol.42
, pp. 3311-3318
-
-
Zomosa-Signoret, V.1
Hernández-Alcántara, G.2
Reyes-Vivas, H.3
Martínez-Martínez, E.4
Garza-Ramos, G.5
Pérez-Montfort, R.6
Tuena de Gómez-Puyou, M.7
Gómez-Puyou, A.8
-
29
-
-
23844433968
-
Reversible equilibrium unfolding of triosephosphate isomerase from Trypanosoma cruzi in guanidinium hydrochloride involves stable dimeric and monomeric intermediates
-
Chánez-Cárdenas M.E., Pérez-Hernández G., Sánchez-Rebollar B.G., Costas M., and Vázquez-Contreras E. Reversible equilibrium unfolding of triosephosphate isomerase from Trypanosoma cruzi in guanidinium hydrochloride involves stable dimeric and monomeric intermediates. Biochemistry 44 (2005) 10883-10892
-
(2005)
Biochemistry
, vol.44
, pp. 10883-10892
-
-
Chánez-Cárdenas, M.E.1
Pérez-Hernández, G.2
Sánchez-Rebollar, B.G.3
Costas, M.4
Vázquez-Contreras, E.5
-
30
-
-
16744364095
-
An unusual triosephosphate isomerase from the early divergent eukaryote Giardia lamblia
-
López-Velázquez G., Molina-Ortiz D., Cabrera N., Hernández-Alcántara G., Peon-Peralta J., Yèpez-Mulia L., Pérez-Montfort R., and Reyes-Vivas H. An unusual triosephosphate isomerase from the early divergent eukaryote Giardia lamblia. Proteins: Struct. Funct. Bioinfort. 55 (2004) 824-834
-
(2004)
Proteins: Struct. Funct. Bioinfort.
, vol.55
, pp. 824-834
-
-
López-Velázquez, G.1
Molina-Ortiz, D.2
Cabrera, N.3
Hernández-Alcántara, G.4
Peon-Peralta, J.5
Yèpez-Mulia, L.6
Pérez-Montfort, R.7
Reyes-Vivas, H.8
-
31
-
-
33845654900
-
Disulfide bridges in the mesophilic triosephosphate isomerase from Giardia lamblia are related to oligomerization and activity
-
Reyes-Vivas H., Díaz A., Peón J., Mendoza-Hernández G., Hernández-Alcántara G., De la Mora-De la Mora I., Enríquez-Flores S., Domínguez-Ramírez L., and López-Velázquez G. Disulfide bridges in the mesophilic triosephosphate isomerase from Giardia lamblia are related to oligomerization and activity. J. Mol. Biol. 365 (2007) 752-763
-
(2007)
J. Mol. Biol.
, vol.365
, pp. 752-763
-
-
Reyes-Vivas, H.1
Díaz, A.2
Peón, J.3
Mendoza-Hernández, G.4
Hernández-Alcántara, G.5
De la Mora-De la Mora, I.6
Enríquez-Flores, S.7
Domínguez-Ramírez, L.8
López-Velázquez, G.9
-
32
-
-
0037293775
-
Unusual fluorescence of W168 in Plasmodium falciparum triosephosphate isomerase, probed by single-tryptophan mutants
-
Pattanaik P., Ravindra G., Sengupta C., Maithal K., Balaram P., and Balaram H. Unusual fluorescence of W168 in Plasmodium falciparum triosephosphate isomerase, probed by single-tryptophan mutants. Eur. J. Biochem. 270 (2003) 745-756
-
(2003)
Eur. J. Biochem.
, vol.270
, pp. 745-756
-
-
Pattanaik, P.1
Ravindra, G.2
Sengupta, C.3
Maithal, K.4
Balaram, P.5
Balaram, H.6
-
33
-
-
0024520745
-
Site-directed mutagenesis by overlap extension using the polymerase chain reaction
-
Ho S.N., Hunt H.D., Horton R.M., Pullen J.K., and Pease L.R. Site-directed mutagenesis by overlap extension using the polymerase chain reaction. Gene 77 (1989) 51-59
-
(1989)
Gene
, vol.77
, pp. 51-59
-
-
Ho, S.N.1
Hunt, H.D.2
Horton, R.M.3
Pullen, J.K.4
Pease, L.R.5
-
34
-
-
0022186670
-
Measurement of protein using bicinchoninic acid
-
Smith P.K., Krohn R.I., Hermanson G.T., Mallia A.K., Gartner F.H., Provenzano M.D., Fujimoto E.K., Goeke N.M., Olson B.J., and Klenk D.C. Measurement of protein using bicinchoninic acid. Anal. Biochem. 150 (1985) 76-85
-
(1985)
Anal. Biochem.
, vol.150
, pp. 76-85
-
-
Smith, P.K.1
Krohn, R.I.2
Hermanson, G.T.3
Mallia, A.K.4
Gartner, F.H.5
Provenzano, M.D.6
Fujimoto, E.K.7
Goeke, N.M.8
Olson, B.J.9
Klenk, D.C.10
-
35
-
-
0028871804
-
How to measure and predict the molar absorption coefficient of a protein
-
Pace N.C., Vajdos F., Fee L., Grimsley G., and Gray V. How to measure and predict the molar absorption coefficient of a protein. Protein Sci. 4 (1995) 2411-2423
-
(1995)
Protein Sci.
, vol.4
, pp. 2411-2423
-
-
Pace, N.C.1
Vajdos, F.2
Fee, L.3
Grimsley, G.4
Gray, V.5
-
36
-
-
0025912338
-
Molecular recognition. Conformational analysis of limited proteolytic sites and serine proteinase protein inhibitors
-
Hubbard S.J., Campbell S.F., and Thornton J.M. Molecular recognition. Conformational analysis of limited proteolytic sites and serine proteinase protein inhibitors. J. Mol. Biol. 220 (1991) 507-530
-
(1991)
J. Mol. Biol.
, vol.220
, pp. 507-530
-
-
Hubbard, S.J.1
Campbell, S.F.2
Thornton, J.M.3
-
37
-
-
0017187836
-
The nature of the accessible and buried surfaces in proteins
-
Chotia. The nature of the accessible and buried surfaces in proteins. J. Mol. Biol. 105 (1976) 1-14
-
(1976)
J. Mol. Biol.
, vol.105
, pp. 1-14
-
-
Chotia1
-
38
-
-
0031473847
-
SWISS-MODEL and the Swiss-Pdb Viewer: an environment for comparative protein modeling
-
Guex N., and Peitsch M.C. SWISS-MODEL and the Swiss-Pdb Viewer: an environment for comparative protein modeling. Electrophoresis 18 (1997) 2714-2723
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
40
-
-
0024259064
-
Red-edged-excitation fluorescence spectroscopy of single-tryptophan proteins
-
Demchenko A.P. Red-edged-excitation fluorescence spectroscopy of single-tryptophan proteins. Eur. Biophys. J. 16 (1988) 121-129
-
(1988)
Eur. Biophys. J.
, vol.16
, pp. 121-129
-
-
Demchenko, A.P.1
-
41
-
-
54049158665
-
Intramolecular proton transfer quenching in tryptophan and tryptamine: temperature dependence
-
Lakowicz J.R. (Ed), SPIE, USA
-
Eftink M.R., and Hu D. Intramolecular proton transfer quenching in tryptophan and tryptamine: temperature dependence. In: Lakowicz J.R. (Ed). Time-Resolved Laser Spectroscopy in Biochemistry IV (1994), SPIE, USA 384-389
-
(1994)
Time-Resolved Laser Spectroscopy in Biochemistry IV
, pp. 384-389
-
-
Eftink, M.R.1
Hu, D.2
-
42
-
-
33745512491
-
Short range photoinduced electron transfer in proteins: QM-MM simulations of tryptophan and flavin fluorescence quenching in proteins
-
Callis P.R., and Liu T. Short range photoinduced electron transfer in proteins: QM-MM simulations of tryptophan and flavin fluorescence quenching in proteins. Chem. Phys. 326 (2006) 230-239
-
(2006)
Chem. Phys.
, vol.326
, pp. 230-239
-
-
Callis, P.R.1
Liu, T.2
-
43
-
-
0001598267
-
Quenching interaction and non-exponential decay:tryptophan 138 of bacteriophage T4 lysozyme
-
Gilst M.V., Tang C., Roth A., and Hudson B. Quenching interaction and non-exponential decay:tryptophan 138 of bacteriophage T4 lysozyme. J. Fluorescence 4 (1994) 203-207
-
(1994)
J. Fluorescence
, vol.4
, pp. 203-207
-
-
Gilst, M.V.1
Tang, C.2
Roth, A.3
Hudson, B.4
-
44
-
-
0018271712
-
Proximity relationships of tryptophanyl residues and oxygen binding site in Levantina hierosolima hemocyanin. A fluorimetric study
-
Shaklai N., Gafni A., and Daniel E. Proximity relationships of tryptophanyl residues and oxygen binding site in Levantina hierosolima hemocyanin. A fluorimetric study. Biochemistry 17 (1978) 4438-4442
-
(1978)
Biochemistry
, vol.17
, pp. 4438-4442
-
-
Shaklai, N.1
Gafni, A.2
Daniel, E.3
-
45
-
-
0025741701
-
Fluorescence spectrum of barnase: contributions of three tryptophan residues and a histidine-related pH dependence
-
Loewenthal R., Sancho J., and Fersht A.R. Fluorescence spectrum of barnase: contributions of three tryptophan residues and a histidine-related pH dependence. Biochemistry 30 (1991) 6775-6779
-
(1991)
Biochemistry
, vol.30
, pp. 6775-6779
-
-
Loewenthal, R.1
Sancho, J.2
Fersht, A.R.3
|