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Volumn 49, Issue 5, 2008, Pages 298-311

Mycobiota of the Takamatsuzuka and Kitora Tumuli in Japan, focusing on the molecular phylogenetic diversity of Fusarium and Trichoderma

Author keywords

Archaeology and biodeterioration; Hypocreales; Molecular phylogenetic analysis; Mycobiota; Takamatsuzuka and Kitora Tumuli

Indexed keywords

ASCOMYCOTA; FUNGI; FUSARIA; FUSARIUM; FUSARIUM OXYSPORUM; FUSARIUM SOLANI; HYPOCREALES; LONGIBRACHIATUM; MYCOTA; PENICILLIUM; TRICHODERMA;

EID: 53849146054     PISSN: 13403540     EISSN: 16182545     Source Type: Journal    
DOI: 10.1007/s10267-008-0427-3     Document Type: Article
Times cited : (22)

References (55)
  • 1
    • 0141941635 scopus 로고    scopus 로고
    • Sudden-death syndrome of soybean is caused by two morphologically and phylogenetically distinct species within the Fusarium solani species complex-F. ivirguliforme in North America and F. tucumaniae in South America
    • T. Aoki K. O'Donnell Y. Homma A.R. Lattanzi 2003 Sudden-death syndrome of soybean is caused by two morphologically and phylogenetically distinct species within the Fusarium solani species complex-F. ivirguliforme in North America and F. tucumaniae in South America Mycologia 95 660 684
    • (2003) Mycologia , vol.95 , pp. 660-684
    • Aoki, T.1    O'Donnell, K.2    Homma, Y.3    Lattanzi, A.R.4
  • 3
    • 53849111389 scopus 로고
    • Microbiological environments and the counterplan for the Takamatsuzuka Tumulus mural paintings (in Japanese)
    • The Agency for Cultural Affairs Japan
    • Arai H (1987) Microbiological environments and the counterplan for the Takamatsuzuka Tumulus mural paintings (in Japanese). In: National treasures, the Takamatsuzuka Tumulus mural paintings: conservation and repair (in Japanese). The Agency for Cultural Affairs, Japan, pp 186-196
    • (1987) National Treasures, the Takamatsuzuka Tumulus Mural Paintings: Conservation and Repair (In Japanese) , pp. 186-196
    • Arai, H.1
  • 4
    • 0025474488 scopus 로고
    • The environmental analysis of archaeological sites
    • H. Arai 1990 The environmental analysis of archaeological sites Trends Anal Chem 9 213 216
    • (1990) Trends Anal Chem , vol.9 , pp. 213-216
    • Arai, H.1
  • 6
    • 0002517748 scopus 로고
    • The genus Cylindrocarpon
    • C. Booth 1966 The genus Cylindrocarpon Mycol Pap 104 1 56
    • (1966) Mycol Pap , vol.104 , pp. 1-56
    • Booth, C.1
  • 7
    • 0242400955 scopus 로고    scopus 로고
    • Hypocrea lixii, the teleomorph of Trichoderm harzianum
    • P. Chaverri G.J. Samuels 2002 Hypocrea lixii, the teleomorph of Trichoderm harzianum Mycol Prog 1 283 286
    • (2002) Mycol Prog , vol.1 , pp. 283-286
    • Chaverri, P.1    Samuels, G.J.2
  • 8
    • 10644268720 scopus 로고    scopus 로고
    • Hypocrea/Trichoderma (Ascomycota, Hypocreales, Hypocreaceae): Species with green ascospores
    • P. Chaverri G.J. Samuels 2003 Hypocrea/Trichoderma (Ascomycota, Hypocreales, Hypocreaceae): species with green ascospores Stud Mycol 48 1 116
    • (2003) Stud Mycol , vol.48 , pp. 1-116
    • Chaverri, P.1    Samuels, G.J.2
  • 9
    • 1342290770 scopus 로고    scopus 로고
    • Hypocrea/Trichoderma: Species with conidiophore elongations and green conidia
    • P. Chaverri L.A. Castlebury B.E. Overton G.J. Samuels 2003 Hypocrea/Trichoderma: species with conidiophore elongations and green conidia Mycologia 95 1100 1140
    • (2003) Mycologia , vol.95 , pp. 1100-1140
    • Chaverri, P.1    Castlebury, L.A.2    Overton, B.E.3    Samuels, G.J.4
  • 10
    • 0033025296 scopus 로고    scopus 로고
    • Microbial degradation of paintings
    • O. Ciferri 1999 Microbial degradation of paintings Appl Environ Microbiol 65 879 885
    • (1999) Appl Environ Microbiol , vol.65 , pp. 879-885
    • Ciferri, O.1
  • 14
    • 53849105946 scopus 로고
    • Microbiological investigation of ancient tombs with paintings: Ozuka tomb in Fukuoka and Chibusan tomb in Kumamoto (in Japanese)
    • Y. Emoto Y. Emoto 1974 Microbiological investigation of ancient tombs with paintings: Ozuka tomb in Fukuoka and Chibusan tomb in Kumamoto (in Japanese) Sci Conserv 12 95 102
    • (1974) Sci Conserv , vol.12 , pp. 95-102
    • Emoto, Y.1    Emoto, Y.2
  • 15
    • 53849147754 scopus 로고
    • Surveys related to the preservation of murals in Torazuka ancient burial mound (in Japanese)
    • Y. Emoto T. Kadokura T. Kenjo H. Arai 1983 Surveys related to the preservation of murals in Torazuka ancient burial mound (in Japanese) Sci Conserv 22 121 146
    • (1983) Sci Conserv , vol.22 , pp. 121-146
    • Emoto, Y.1    Kadokura, T.2    Kenjo, T.3    Arai, H.4
  • 16
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • J. Felsenstein 1985 Confidence limits on phylogenies: an approach using the bootstrap Evolution 39 783 791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 19
    • 0029077424 scopus 로고
    • Role of fungi in the deterioration of wall paintings
    • K.L. Garg K.K. Jain A.K. Mishra 1995 Role of fungi in the deterioration of wall paintings Sci Total Environ 167 255 271
    • (1995) Sci Total Environ , vol.167 , pp. 255-271
    • Garg, K.L.1    Jain, K.K.2    Mishra, A.K.3
  • 21
    • 0034469519 scopus 로고    scopus 로고
    • Distribution of microorganisms on ancient wall paintings as related to associated faunal elements
    • A.A. Gorbushina K. Petersen 2000 Distribution of microorganisms on ancient wall paintings as related to associated faunal elements Int Biodeterior Biodegrad 46 277 284
    • (2000) Int Biodeterior Biodegrad , vol.46 , pp. 277-284
    • Gorbushina, A.A.1    Petersen, K.2
  • 22
    • 33845487873 scopus 로고    scopus 로고
    • Saving beauty
    • J. Graff 2006 Saving beauty TIME Europe 167 36 42
    • (2006) TIME Europe , vol.167 , pp. 36-42
    • Graff, J.1
  • 23
    • 0028191804 scopus 로고
    • Mycological and ultrastructural studies to evaluate biodeterioration of mural paintings: Detection of fungi and mites in frescos of the Monastery of St. Damian in Assisi
    • M. Guglielminetti C.G. Morghen A. Radaelli F. Bistoni G. Carruba G. Spera G. Caretta 1994 Mycological and ultrastructural studies to evaluate biodeterioration of mural paintings: detection of fungi and mites in frescos of the Monastery of St. Damian in Assisi Int Biodeterior Biodegrad 33 269 283
    • (1994) Int Biodeterior Biodegrad , vol.33 , pp. 269-283
    • Guglielminetti, M.1    Morghen, C.G.2    Radaelli, A.3    Bistoni, F.4    Carruba, G.5    Spera, G.6    Caretta, G.7
  • 24
    • 31344470004 scopus 로고    scopus 로고
    • Wanted: Solution for cave mold
    • C. Holden 2003 Wanted: solution for cave mold Science 300 245
    • (2003) Science , vol.300 , pp. 245
    • Holden, C.1
  • 25
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • J.P. Huelsenbeck F. Ronquist 2001 MRBAYES: Bayesian inference of phylogenetic trees Bioinformatics 17 754 755
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 26
    • 33845269538 scopus 로고    scopus 로고
    • Hypocrea rufa/Trichoderma viride: A reassessment, and description of five closely related species with without warted conidia
    • W.M. Jaklitsch G.J. Samuels S.L. Dodd B.-S. Lu I.S. Druzhinina 2006 Hypocrea rufa/Trichoderma viride: a reassessment, and description of five closely related species with without warted conidia Stud Mycol 56 135 177
    • (2006) Stud Mycol , vol.56 , pp. 135-177
    • Jaklitsch, W.M.1    Samuels, G.J.2    Dodd, S.L.3    Lu, B.-S.4    Druzhinina, I.S.5
  • 27
    • 53849107963 scopus 로고    scopus 로고
    • Past and present situation of microorganisms in the Takamatsuzuka Tumulus (in Japanese)
    • R. Kigawa C. Sano S. Miura 2004 Past and present situation of microorganisms in the Takamatsuzuka Tumulus (in Japanese) Sci Conserv 43 79 85
    • (2004) Sci Conserv , vol.43 , pp. 79-85
    • Kigawa, R.1    Sano, C.2    Miura, S.3
  • 28
    • 53849127665 scopus 로고    scopus 로고
    • Investigation of moulds in the Kitora Tumulus during its excavation and restoration works (in Japanese)
    • R. Kigawa C. Sano H. Mabuchi S. Miura 2005 Investigation of moulds in the Kitora Tumulus during its excavation and restoration works (in Japanese) Sci Conserv 44 165 171
    • (2005) Sci Conserv , vol.44 , pp. 165-171
    • Kigawa, R.1    Sano, C.2    Mabuchi, H.3    Miura, S.4
  • 29
    • 53849137506 scopus 로고    scopus 로고
    • Investigation of biological issues in the Kitora Tumulus during its restoration work (2) (in Japanese)
    • R. Kigawa H. Mabuchi C. Sano S. Miura 2006 Investigation of biological issues in the Kitora Tumulus during its restoration work (2) (in Japanese) Sci Conserv 45 93 105
    • (2006) Sci Conserv , vol.45 , pp. 93-105
    • Kigawa, R.1    Mabuchi, H.2    Sano, C.3    Miura, S.4
  • 30
    • 53849134325 scopus 로고    scopus 로고
    • Concept and measures of the conservation of the Takamatsuzuka Tumulus for thirty years and the present situation of biodeterioration (in Japanese)
    • R. Kigawa C. Sano T. Ishizaki S. Miura 2006 Concept and measures of the conservation of the Takamatsuzuka Tumulus for thirty years and the present situation of biodeterioration (in Japanese) Sci Conserv 45 33 58
    • (2006) Sci Conserv , vol.45 , pp. 33-58
    • Kigawa, R.1    Sano, C.2    Ishizaki, T.3    Miura, S.4
  • 31
    • 53849136083 scopus 로고    scopus 로고
    • Investigation of biological issues in the Kitora Tumulus during its restoration work (3) (in Japanese)
    • R. Kigawa C. Sano H. Mabuchi S. Miura 2007 Investigation of biological issues in the Kitora Tumulus during its restoration work (3) (in Japanese) Sci Conserv 46 227 233
    • (2007) Sci Conserv , vol.46 , pp. 227-233
    • Kigawa, R.1    Sano, C.2    Mabuchi, H.3    Miura, S.4
  • 33
    • 0030174789 scopus 로고    scopus 로고
    • Cellulase formation by species of Trichoderma sect. Longibrachiatum and Hypocrea spp. with anamorphs referable to Trichoderma sect. Longibrachiatum
    • C.P. Kubicek U.M. Bölzlbauer W. Kovacs R.L. Mach K. Kuhls E. Lieckfeldt T. Börner G.J. Samuels 1996 Cellulase formation by species of Trichoderma sect. Longibrachiatum and Hypocrea spp. with anamorphs referable to Trichoderma sect. Longibrachiatum Fungal Genet Biol 20 105 114
    • (1996) Fungal Genet Biol , vol.20 , pp. 105-114
    • Kubicek, C.P.1    Bölzlbauer, U.M.2    Kovacs, W.3    MacH, R.L.4    Kuhls, K.5    Lieckfeldt, E.6    Börner, T.7    Samuels, G.J.8
  • 34
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • S. Kumar K. Tamura M. Nei 2004 MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment Brief Bioinform 5 150 163
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 36
    • 0035061848 scopus 로고    scopus 로고
    • Phylogenetic relationships in Neonectria species having Cylindrocarpon anamorphs inferred from mitochondrial ribosomal DNA sequences
    • F.R. Mantiri G.J. Samuels J.E. Rahe B.M. Honda 2001 Phylogenetic relationships in Neonectria species having Cylindrocarpon anamorphs inferred from mitochondrial ribosomal DNA sequences Can J Bot 79 334 340
    • (2001) Can J Bot , vol.79 , pp. 334-340
    • Mantiri, F.R.1    Samuels, G.J.2    Rahe, J.E.3    Honda, B.M.4
  • 37
    • 0032906031 scopus 로고    scopus 로고
    • Bayesian phylogenetic inference via Markov chain Monte Carlo methods
    • B. Mau M. Newton B. Larget 1999 Bayesian phylogenetic inference via Markov chain Monte Carlo methods Biometrics 55 1 12
    • (1999) Biometrics , vol.55 , pp. 1-12
    • Mau, B.1    Newton, M.2    Larget, B.3
  • 38
    • 85031379392 scopus 로고    scopus 로고
    • Candida tumulicola and Candida takamatsuzukensis spp. nov., two new yeast species assignable to the Candida membranifaciens clade from the stone chamber of the Takamatsu-zuka Tumulus in Nara Prefecture, Japan
    • (in press)
    • Nagatsuka Y, Kiyuna T, Kigawa R, Sano C, Miura S, Sugiyama J (2008) Candida tumulicola and Candida takamatsuzukensis spp. nov., two new yeast species assignable to the Candida membranifaciens clade from the stone chamber of the Takamatsu-zuka Tumulus in Nara Prefecture, Japan. Int J Syst Evol Microbiol (in press)
    • (2008) Int J Syst Evol Microbiol
    • Nagatsuka, Y.1    Kiyuna, T.2    Kigawa, R.3    Sano, C.4    Miura, S.5    Sugiyama, J.6
  • 39
    • 0038519302 scopus 로고    scopus 로고
    • Genetic diversity among clinical isolates of Acremonium strictum determined during an investigation of a fatal mycosis
    • T.J. Novicki K. LaFe L. Bui U. Bui R. Geise K. Marr B.T. Cookson 2003 Genetic diversity among clinical isolates of Acremonium strictum determined during an investigation of a fatal mycosis J Clin Microbiol 41 2623 2628
    • (2003) J Clin Microbiol , vol.41 , pp. 2623-2628
    • Novicki, T.J.1    Lafe, K.2    Bui, L.3    Bui, U.4    Geise, R.5    Marr, K.6    Cookson, B.T.7
  • 41
    • 0001446750 scopus 로고    scopus 로고
    • Molecular phylogeny of the Nectria haematococca-Fusarium solani species complex
    • K. O'Donnell 2000 Molecular phylogeny of the Nectria haematococca- Fusarium solani species complex Mycologia 92 919 938
    • (2000) Mycologia , vol.92 , pp. 919-938
    • O'Donnell, K.1
  • 42
    • 0032478185 scopus 로고    scopus 로고
    • Multiple evolutionary origins of the fungus causing Panama disease of banana: Concordant evidence from nuclear and mitochondrial gene genealogies
    • K. O'Donnell H.C. Kistler E. Cigelnik R.C. Ploetz 1998 Multiple evolutionary origins of the fungus causing Panama disease of banana: concordant evidence from nuclear and mitochondrial gene genealogies Proc Natl Acad Sci U S A 95 2044 2049
    • (1998) Proc Natl Acad Sci U S a , vol.95 , pp. 2044-2049
    • O'Donnell, K.1    Kistler, H.C.2    Cigelnik, E.3    Ploetz, R.C.4
  • 43
    • 8644265007 scopus 로고    scopus 로고
    • Genetic diversity of human pathogenic members of the Fusarium oxysporum complex inferred from multilocus DNA sequence data and amplified fragment length polymorphism analyses: Evidence for the recent dispersion of a geographically widespread clonal lineage and nosocomial origin
    • K. O'Donnell D.A. Sutton M.G. Rinaldi K.C. Magnon P.A. Cox S.G. Revankar S. Sanche D.M. Geiser J.H. Juba J.-A. van Burik A. Padhye E.J. Anaissie A. Francesconi T.J. Walsh J.S. Robinson 2004 Genetic diversity of human pathogenic members of the Fusarium oxysporum complex inferred from multilocus DNA sequence data and amplified fragment length polymorphism analyses: evidence for the recent dispersion of a geographically widespread clonal lineage and nosocomial origin J Clin Microbiol 42 5109 5120
    • (2004) J Clin Microbiol , vol.42 , pp. 5109-5120
    • O'Donnell, K.1    Sutton, D.A.2    Rinaldi, M.G.3    Magnon, K.C.4    Cox, P.A.5    Revankar, S.G.6    Sanche, S.7    Geiser, D.M.8    Juba, J.H.9    Van Burik, J.-A.10    Padhye, A.11    Anaissie, E.J.12    Francesconi, A.13    Walsh, T.J.14    Robinson, J.S.15
  • 46
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: Testing the model of DNA substitution
    • D. Posada K.A. Crandall 1998 Modeltest: testing the model of DNA substitution Bioinformatics 14 817 818
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 47
    • 0029818407 scopus 로고    scopus 로고
    • Probability distribution of molecular evolutionary trees: A new method of phylogenetic inference
    • B. Rannala Z. Yang 1996 Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference J Mol Evol 43 304 311
    • (1996) J Mol Evol , vol.43 , pp. 304-311
    • Rannala, B.1    Yang, Z.2
  • 48
    • 0347487346 scopus 로고    scopus 로고
    • Genera of Bionectriaceae, Hypocreaceae and Nectriaceae (Hypocreales, Ascomycetes)
    • A.Y. Rossman G.J. Samuels C.T. Rogerson R. Lowen 1999 Genera of Bionectriaceae, Hypocreaceae and Nectriaceae (Hypocreales, Ascomycetes) Stud Mycol 42 1 248
    • (1999) Stud Mycol , vol.42 , pp. 1-248
    • Rossman, A.Y.1    Samuels, G.J.2    Rogerson, C.T.3    Lowen, R.4
  • 49
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • N. Saitou M. Nei 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees Mol Biol Evol 4 406 425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 50
    • 32244443020 scopus 로고    scopus 로고
    • Trichoderma: Systematics, the sexual states, and ecology
    • G.J. Samuels 2006 Trichoderma: systematics, the sexual states, and ecology Phytopathology 96 195 206
    • (2006) Phytopathology , vol.96 , pp. 195-206
    • Samuels, G.J.1
  • 51
    • 0442326327 scopus 로고    scopus 로고
    • A monograph of Bionectria (Ascomycota, Hypocreales, Bionectriaceae) and its Clonostachys anamorphs
    • H.-J. Schroers 2001 A monograph of Bionectria (Ascomycota, Hypocreales, Bionectriaceae) and its Clonostachys anamorphs Stud Mycol 46 1 214
    • (2001) Stud Mycol , vol.46 , pp. 1-214
    • Schroers, H.-J.1
  • 52
    • 0001962272 scopus 로고
    • A monograph of Stilbella and some allied hyphomycetes
    • K.A. Seifert 1985 A monograph of Stilbella and some allied hyphomycetes Stud Mycol 27 1 235
    • (1985) Stud Mycol , vol.27 , pp. 1-235
    • Seifert, K.A.1
  • 53
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • J.D. Thompson D.G. Higgins T.J. Gibson 1994 CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res 22 4673 4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 54
    • 0036617386 scopus 로고    scopus 로고
    • Molecular, morphological and phylogenetic analysis of the Fusarium avenaceum / F. arthrosporioides / F. tricinctum species complex: A polyphasic approach
    • T. Yli-Mattila S. Paavanen-Huhtala S.A. Bulat I.A. Alekhina H.I. Nirenberg 2002 Molecular, morphological and phylogenetic analysis of the Fusarium avenaceum / F. arthrosporioides / F. tricinctum species complex: a polyphasic approach Mycol Res 106 655 669
    • (2002) Mycol Res , vol.106 , pp. 655-669
    • Yli-Mattila, T.1    Paavanen-Huhtala, S.2    Bulat, S.A.3    Alekhina, I.A.4    Nirenberg, H.I.5
  • 55
    • 33745181669 scopus 로고    scopus 로고
    • Members of the Fusarium solani species complex that cause infections in both humans and plants are common in the environment
    • N. Zhang K. O'Donnell D.A. Sutton F.A. Nalim R.C. Summerbell A.A. Padhye D.M. Geiser 2006 Members of the Fusarium solani species complex that cause infections in both humans and plants are common in the environment J Clin Microbiol 44 2186 2190
    • (2006) J Clin Microbiol , vol.44 , pp. 2186-2190
    • Zhang, N.1    O'Donnell, K.2    Sutton, D.A.3    Nalim, F.A.4    Summerbell, R.C.5    Padhye, A.A.6    Geiser, D.M.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.