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Volumn 58, Issue 9, 2008, Pages 2102-2106

Pelagicola litoralis gen. nov., sp. nov., isolated from coastal water in Korea

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BACTERIAL RNA; CARDIOLIPIN; CYTIDINE; FATTY ACID; GUANOSINE; ISOPRENOID; ISOPRENOID QUINONE; PHOSPHATIDYLETHANOLAMINE; PHOSPHATIDYLGLYCEROL; QUINONE DERIVATIVE; RNA 16S; SODIUM CHLORIDE; UNCLASSIFIED DRUG; INORGANIC SALT; PHOSPHOLIPID; RIBOSOME DNA; SEA WATER;

EID: 53749103374     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.65820-0     Document Type: Article
Times cited : (28)

References (32)
  • 3
    • 33845780620 scopus 로고    scopus 로고
    • Citreimonas salinaria gen. nov., sp. nov., a member of the Roseobacter clade isolated from a solar saltern
    • Choi, D. H. & Cho, B. C. (2006). Citreimonas salinaria gen. nov., sp. nov., a member of the Roseobacter clade isolated from a solar saltern. Int J Syst Evol Microbiol 56, 2799-2803.
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 2799-2803
    • Choi, D.H.1    Cho, B.C.2
  • 4
    • 77956867761 scopus 로고
    • Analysis of isoprenoid quinones
    • Collins, M. D. (1985). Analysis of isoprenoid quinones. Methods Microbiol 18, 329-366.
    • (1985) Methods Microbiol , vol.18 , pp. 329-366
    • Collins, M.D.1
  • 5
    • 0034525436 scopus 로고    scopus 로고
    • A rapid DNA isolation procedure for the identification of Campylobacter jejuni by the polymerase chain reaction
    • Englen, M. D. & Kelley, L. C. (2000). A rapid DNA isolation procedure for the identification of Campylobacter jejuni by the polymerase chain reaction. Lett Appl Microbiol 31, 421-426.
    • (2000) Lett Appl Microbiol , vol.31 , pp. 421-426
    • Englen, M.D.1    Kelley, L.C.2
  • 6
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17, 368-376.
    • (1981) J Mol Evol , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 7
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 8
    • 55849118868 scopus 로고    scopus 로고
    • Garrity, G. M., Bell, J. A. & Lilburn, T. (2005). Family I. Rhodobacteraceae fam. nov. In Bergey's Manual of Systematic Bacteriology, 2nd edn, 2, part C, pp. 161-229. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
    • Garrity, G. M., Bell, J. A. & Lilburn, T. (2005). Family I. Rhodobacteraceae fam. nov. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 2, part C, pp. 161-229. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
  • 9
    • 0025812508 scopus 로고
    • Improved method for phenotypical characterization of marine bacteria
    • Hansen, G. H. & Sorheim, R. (1991). Improved method for phenotypical characterization of marine bacteria. J Microbiol Methods 13, 231-241.
    • (1991) J Microbiol Methods , vol.13 , pp. 231-241
    • Hansen, G.H.1    Sorheim, R.2
  • 10
    • 25144446363 scopus 로고    scopus 로고
    • jPHYDIT: A JAVA-based integrated environment for molecular phylogeny of ribosomal RNA sequences
    • Jeon, Y.-S., Chung, H., Park, S., Hur, I., Lee, J.-H. & Chun, J. (2005). jPHYDIT: a JAVA-based integrated environment for molecular phylogeny of ribosomal RNA sequences. Bioinformatics 21, 3171-3173.
    • (2005) Bioinformatics , vol.21 , pp. 3171-3173
    • Jeon, Y.-S.1    Chung, H.2    Park, S.3    Hur, I.4    Lee, J.-H.5    Chun, J.6
  • 11
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • Edited by H. N. Munro. New York: Academic Press
    • Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, vol. 3, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
    • (1969) Mammalian Protein Metabolism , vol.3 , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 12
    • 77956800518 scopus 로고
    • Lipid and cell-wall analysis in bacterial systematics
    • Komagata, K. & Suzuki, K. (1987). Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161-207.
    • (1987) Methods Microbiol , vol.19 , pp. 161-207
    • Komagata, K.1    Suzuki, K.2
  • 13
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 14
    • 0032908226 scopus 로고    scopus 로고
    • Roseovarius tolerans gen. nov., sp. nov., a budding bacterium with variable bacteriochlorophyll a production from hypersaline Ekho Lake
    • Labrenz, M., Collins, M. D., Lawson, P. A., Tindall, B. J., Schumann, P. & Hirsch, P. (1999). Roseovarius tolerans gen. nov., sp. nov., a budding bacterium with variable bacteriochlorophyll a production from hypersaline Ekho Lake. Int J Syst Bacteriol 49, 137-147.
    • (1999) Int J Syst Bacteriol , vol.49 , pp. 137-147
    • Labrenz, M.1    Collins, M.D.2    Lawson, P.A.3    Tindall, B.J.4    Schumann, P.5    Hirsch, P.6
  • 15
    • 0028914833 scopus 로고
    • Roseobacter algicola sp. nov., a new marine bacterium isolated from the phycosphere of the toxin-producing dinoflagellate Prorocentrum lima
    • Lafay, B., Ruimy, R., Rausch de Traubenberg, C., Breittmayer, V., Gauthier, M. J. & Christen, R. (1995). Roseobacter algicola sp. nov., a new marine bacterium isolated from the phycosphere of the toxin-producing dinoflagellate Prorocentrum lima. Int J Syst Bacteriol 45, 290-296.
    • (1995) Int J Syst Bacteriol , vol.45 , pp. 290-296
    • Lafay, B.1    Ruimy, R.2    Rausch de Traubenberg, C.3    Breittmayer, V.4    Gauthier, M.J.5    Christen, R.6
  • 16
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley
    • Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 17
    • 0034548846 scopus 로고    scopus 로고
    • Bacterial chromosomal painting for in situ monitoring of cultured marine bacteria
    • Lanoil, B. D., Carlson, C. A. & Giovannoni, S. J. (2000). Bacterial chromosomal painting for in situ monitoring of cultured marine bacteria. Environ Microbiol 2, 654-665.
    • (2000) Environ Microbiol , vol.2 , pp. 654-665
    • Lanoil, B.D.1    Carlson, C.A.2    Giovannoni, S.J.3
  • 18
    • 0021828693 scopus 로고
    • Modified medium for the oxidation-fermentation test in the identification of marine bacteria
    • Lemos, M. L., Toranzo, A. E. & Barja, J. L. (1985). Modified medium for the oxidation-fermentation test in the identification of marine bacteria. Appl Environ Microbiol 49, 1541-1543.
    • (1985) Appl Environ Microbiol , vol.49 , pp. 1541-1543
    • Lemos, M.L.1    Toranzo, A.E.2    Barja, J.L.3
  • 19
    • 0000144963 scopus 로고
    • Composition of sea water
    • Lyman, J. & Fleming, R. H. (1940). Composition of sea water. J Mar Res 3, 134-146.
    • (1940) J Mar Res , vol.3 , pp. 134-146
    • Lyman, J.1    Fleming, R.H.2
  • 20
    • 33745300025 scopus 로고    scopus 로고
    • Martens, T., Heidorn, T., Pukall, R., Simon, M., Tindall, B. J. & Brinkhoff, T. (2006). Reclassification of Roseobacter gallaeciensis Ruiz-Ponte et al. 1998 as Phaeobacter gallaeciensis gen. nov., comb. nov., description of Phaeobacter inhibens sp. nov., reclassification of Ruegeria algicola (Lafay et al. 1995) Uchino et al. 1998 as Marinovum algicola gen. nov., comb. nov., and emended descriptions of the genera Roseobacter, Ruegeria and Leisingera. Int J Syst Evol Microbiol 56, 1293-1304.
    • Martens, T., Heidorn, T., Pukall, R., Simon, M., Tindall, B. J. & Brinkhoff, T. (2006). Reclassification of Roseobacter gallaeciensis Ruiz-Ponte et al. 1998 as Phaeobacter gallaeciensis gen. nov., comb. nov., description of Phaeobacter inhibens sp. nov., reclassification of Ruegeria algicola (Lafay et al. 1995) Uchino et al. 1998 as Marinovum algicola gen. nov., comb. nov., and emended descriptions of the genera Roseobacter, Ruegeria and Leisingera. Int J Syst Evol Microbiol 56, 1293-1304.
  • 22
    • 0020326060 scopus 로고
    • Nile blue A as a fluorescent stain for poly-β-hydroxybutyrate
    • Ostle, A. G. & Holt, J. G. (1982). Nile blue A as a fluorescent stain for poly-β-hydroxybutyrate. Appl Environ Microbiol 44, 238-241.
    • (1982) Appl Environ Microbiol , vol.44 , pp. 238-241
    • Ostle, A.G.1    Holt, J.G.2
  • 23
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • Posada, D. & Crandall, K. A. (1998). MODELTEST: testing the model of DNA substitution. Bioinformatics 14, 817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 24
    • 0031798779 scopus 로고    scopus 로고
    • Roseobacter gallaeciensis sp. nov., a new marine bacterium isolated from rearings and collectors of the scallop Pecten maximus
    • Ruiz-Ponte, C., Cilia, V., Lambert, C. & Nicolas, J. L. (1998). Roseobacter gallaeciensis sp. nov., a new marine bacterium isolated from rearings and collectors of the scallop Pecten maximus. Int J Syst Bacteriol 48, 537-542.
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 537-542
    • Ruiz-Ponte, C.1    Cilia, V.2    Lambert, C.3    Nicolas, J.L.4
  • 25
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 26
    • 0035989518 scopus 로고    scopus 로고
    • Leisingera methylohalidivorans gen. nov., sp. nov., a marine methylotroph that grows on methyl bromide
    • Schaefer, J. K., Goodwin, K. D., McDonald, I. R., Murrell, J. C. & Oremland, R. S. (2002). Leisingera methylohalidivorans gen. nov., sp. nov., a marine methylotroph that grows on methyl bromide. Int J Syst Evol Microbiol 52, 851-859.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 851-859
    • Schaefer, J.K.1    Goodwin, K.D.2    McDonald, I.R.3    Murrell, J.C.4    Oremland, R.S.5
  • 27
    • 0000612080 scopus 로고
    • Phenotypic characterization
    • Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
    • Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
    • (1994) Methods for General and Molecular Bacteriology , pp. 607-654
    • Smibert, R.M.1    Krieg, N.R.2
  • 28
    • 0034802237 scopus 로고    scopus 로고
    • Phylogenetic analysis and taxonomic study of marine Cytophaga-like bacteria: Proposal for Tenacibaculum gen. nov. with Tenacibaculum maritimum comb. nov. and Tenacibaculum ovolyticum comb. nov., and description of Tenacibaculum mesophilum sp. nov. and Tenacibaculum amylolyticum sp. nov
    • Suzuki, M., Nakagawa, Y., Harayama, S. & Yamamoto, S. (2001). Phylogenetic analysis and taxonomic study of marine Cytophaga-like bacteria: proposal for Tenacibaculum gen. nov. with Tenacibaculum maritimum comb. nov. and Tenacibaculum ovolyticum comb. nov., and description of Tenacibaculum mesophilum sp. nov. and Tenacibaculum amylolyticum sp. nov. Int J Syst Evol Microbiol 51, 1639-1652.
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 1639-1652
    • Suzuki, M.1    Nakagawa, Y.2    Harayama, S.3    Yamamoto, S.4
  • 29
    • 55849106365 scopus 로고    scopus 로고
    • Swofford, D. L, 1998, PAUP: Phylogenetic analysis using parsimony, version 4. Sunderland, MA: Sinauer Associates
    • Swofford, D. L., (1998). PAUP: Phylogenetic analysis using parsimony, version 4. Sunderland, MA: Sinauer Associates.
  • 30
    • 0021715576 scopus 로고
    • Determination of DNA base composition by reversed-phase high-performance liquid chromatography
    • Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
    • (1984) FEMS Microbiol Lett , vol.25 , pp. 125-128
    • Tamaoka, J.1    Komagata, K.2
  • 31
    • 4344666279 scopus 로고    scopus 로고
    • Nocardioides ganghwensis sp. nov., isolated from tidal flat sediment
    • Yi, H. & Chun, J. (2004). Nocardioides ganghwensis sp. nov., isolated from tidal flat sediment. Int J Syst Evol Microbiol 54, 1295-1299.
    • (2004) Int J Syst Evol Microbiol , vol.54 , pp. 1295-1299
    • Yi, H.1    Chun, J.2
  • 32
    • 34248198910 scopus 로고    scopus 로고
    • Phaeobacter daeponensis sp. nov., isolated from a tidal flat of the Yellow Sea in Korea
    • Yoon, J.-H., Kang, S.-J., Lee, S.-Y. & Oh, T.-K. (2007). Phaeobacter daeponensis sp. nov., isolated from a tidal flat of the Yellow Sea in Korea. Int J Syst Evol Microbiol 57, 856-861.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 856-861
    • Yoon, J.-H.1    Kang, S.-J.2    Lee, S.-Y.3    Oh, T.-K.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.