메뉴 건너뛰기




Volumn 2007, Issue , 2007, Pages

MicroRNA target detection and analysis for genes related to breast cancer using MDLcompress

Author keywords

[No Author keywords available]

Indexed keywords


EID: 53649106963     PISSN: 16874145     EISSN: 16874153     Source Type: Journal    
DOI: 10.1155/2007/43670     Document Type: Article
Times cited : (30)

References (40)
  • 1
    • 0032545933 scopus 로고    scopus 로고
    • Potent and specific genetic interference by double-stranded RNA in caenorhabditis elegans
    • Fire A., Xu S., Montgomery M. K., Kostas S. A., Driver S. E., Mello C. C., Potent and specific genetic interference by double-stranded RNA in caenorhabditis elegans Nature 1998 391 6669 806 811
    • (1998) Nature , vol.391 , Issue.6669 , pp. 806-811
    • Fire, A.1    Xu, S.2    Montgomery, M.K.3    Kostas, S.A.4    Driver, S.E.5    Mello, C.C.6
  • 2
    • 4644350944 scopus 로고    scopus 로고
    • Unlocking the potential of the human genome with RNA interference
    • Hannon G. J., Rossi J. J., Unlocking the potential of the human genome with RNA interference Nature 2004 431 7006 371 378
    • (2004) Nature , vol.431 , Issue.7006 , pp. 371-378
    • Hannon, G.J.1    Rossi, J.J.2
  • 5
    • 11844278458 scopus 로고    scopus 로고
    • Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
    • Lewis B. P., Burge C. B., Bartel D. P., Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets Cell 2005 120 1 15 20
    • (2005) Cell , vol.120 , Issue.1 , pp. 15-20
    • Lewis, B.P.1    Burge, C.B.2    Bartel, D.P.3
  • 6
    • 23144449159 scopus 로고    scopus 로고
    • MicroInspector: A web tool for detection of miRNA binding sites in an RNA sequence
    • Rusinov V., Baev V., Minkov I. N., Tabler M., MicroInspector: a web tool for detection of miRNA binding sites in an RNA sequence Nucleic Acids Research 2005 33, web server issue W696 W700
    • (2005) Nucleic Acids Research , vol.33
    • Rusinov, V.1    Baev, V.2    Minkov, I.N.3    Tabler, M.4
  • 12
    • 53649093747 scopus 로고    scopus 로고
    • MicroRNA target motif detection using OSCR
    • Niskayuna, NY, USA GE Research
    • Evans S. C., Torres A., Miller J., MicroRNA target motif detection using OSCR Tech. Rep. GRC223 2006 Niskayuna, NY, USA GE Research
    • (2006) Tech. Rep. GRC223
    • Evans, S.C.1    Torres, A.2    Miller, J.3
  • 15
    • 34547630306 scopus 로고    scopus 로고
    • DNA sequence compression using the normalized maximum likelihood model for discrete regression
    • March 2003 Snowbird, Utah, USA
    • Tobus I., Korodi G., Rissanen J., DNA sequence compression using the normalized maximum likelihood model for discrete regression Proceedings of Data Compression Conference (DCC 03) March 2003 Snowbird, Utah, USA 253 262
    • Proceedings of Data Compression Conference (DCC 03) , pp. 253-262
    • Tobus, I.1    Korodi, G.2    Rissanen, J.3
  • 16
  • 19
    • 0036947893 scopus 로고    scopus 로고
    • DNACompress: Fast and effective DNA sequence compression
    • Chen X., Li M., Ma B., Tromp J., DNACompress: fast and effective DNA sequence compression Bioinformatics 2002 18 12 1696 1698
    • (2002) Bioinformatics , vol.18 , Issue.12 , pp. 1696-1698
    • Chen, X.1    Li, M.2    Ma, B.3    Tromp, J.4
  • 20
    • 26444479436 scopus 로고    scopus 로고
    • DNA compression challenge revisited: A dynamic programming approach
    • 2005 Jeju Island, Korea Lecture Notes in Computer Science
    • Behzadi B., Le Fessant F., DNA compression challenge revisited: a dynamic programming approach 3537 The 16th Annual Symposium on Combinatorial Pattern Matching (CPM 05) 2005 Jeju Island, Korea 190 200 Lecture Notes in Computer Science
    • The 16th Annual Symposium on Combinatorial Pattern Matching (CPM 05) , vol.3537 , pp. 190-200
    • Behzadi, B.1    Le Fessant, F.2
  • 24
    • 0036544755 scopus 로고    scopus 로고
    • MicroRNAs are complementary to 3 ′ UTR sequence motifs that mediate negative post-transcriptional regulation
    • Lai E. C., MicroRNAs are complementary to 3 ′ UTR sequence motifs that mediate negative post-transcriptional regulation Nature Genetics 2002 30 4 363 364
    • (2002) Nature Genetics , vol.30 , Issue.4 , pp. 363-364
    • Lai, E.C.1
  • 25
    • 18244402404 scopus 로고    scopus 로고
    • Pervasive regulation of Drosophila Notch target genes by GY-box-, Brd-box-, and K-box-class microRNAs
    • Lai E. C., Tam B., Rubin G. M., Pervasive regulation of Drosophila Notch target genes by GY-box-, Brd-box-, and K-box-class microRNAs Genes Development 2005 19 9 1067 1080
    • (2005) Genes Development , vol.19 , Issue.9 , pp. 1067-1080
    • Lai, E.C.1    Tam, B.2    Rubin, G.M.3
  • 26
    • 1642374097 scopus 로고    scopus 로고
    • Specificity of microRNA target selection in translational repression
    • Doench J. G., Sharp P. A., Specificity of microRNA target selection in translational repression Genes Development 2004 18 5 504 511
    • (2004) Genes Development , vol.18 , Issue.5 , pp. 504-511
    • Doench, J.G.1    Sharp, P.A.2
  • 28
    • 47049123420 scopus 로고    scopus 로고
    • A new universal two part code for estimation of string kolmogorov complexity and algorithmic minimum sufficient statistic
    • June 2003 Piscataway, NJ, USA
    • Evans S. C., Saulnier G. J., Bush S. F., A new universal two part code for estimation of string kolmogorov complexity and algorithmic minimum sufficient statistic DIMACS Workshop on Complexity and Inference June 2003 Piscataway, NJ, USA
    • DIMACS Workshop on Complexity and Inference
    • Evans, S.C.1    Saulnier, G.J.2    Bush, S.F.3
  • 29
    • 33646056975 scopus 로고    scopus 로고
    • A genetic screen implicates miRNA-372 and miRNA-373 as oncogenes in testicular germ cell tumors
    • Voorhoeve P. M., le Sage C., Schrier M., A genetic screen implicates miRNA-372 and miRNA-373 as oncogenes in testicular germ cell tumors Cell 2006 124 6 1169 1181
    • (2006) Cell , vol.124 , Issue.6 , pp. 1169-1181
    • Voorhoeve, P.M.1    Le Sage, C.2    Schrier, M.3
  • 30
    • 0037516860 scopus 로고    scopus 로고
    • CDNA microarray analysis of genes associated with ERBB2 (HER2/ neu) overexpression in human mammary luminal epithelial cells
    • Mackay A., Jones C., Dexter T., cDNA microarray analysis of genes associated with ERBB2 (HER2/ neu) overexpression in human mammary luminal epithelial cells Oncogene 2003 22 17 2680 2688
    • (2003) Oncogene , vol.22 , Issue.17 , pp. 2680-2688
    • MacKay, A.1    Jones, C.2    Dexter, T.3
  • 31
    • 11144355581 scopus 로고    scopus 로고
    • Identification and validation of an ERBB2 gene expression signature in breast cancers
    • Bertucci F., Borie N., Ginestier C., Identification and validation of an ERBB2 gene expression signature in breast cancers Oncogene 2004 23 14 2564 2575
    • (2004) Oncogene , vol.23 , Issue.14 , pp. 2564-2575
    • Bertucci, F.1    Borie, N.2    Ginestier, C.3
  • 32
    • 13944282215 scopus 로고    scopus 로고
    • Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs
    • Lim L. P., Lau N. C., Garrett-Engele P., Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs Nature 2005 433 7027 769 773
    • (2005) Nature , vol.433 , Issue.7027 , pp. 769-773
    • Lim, L.P.1    Lau, N.C.2    Garrett-Engele, P.3
  • 33
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • Altschul S. F., Madden T. L., Schffer A. A., Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Research 1997 25 17 3389 3402
    • (1997) Nucleic Acids Research , vol.25 , Issue.17 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schffer, A.A.3
  • 34
    • 13444301473 scopus 로고    scopus 로고
    • UTRdb and UTRsite: A collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs
    • Mignone F., Grillo G., Licciulli F., UTRdb and UTRsite: a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs Nucleic Acids Research 2005 33, database issue D141 D146
    • (2005) Nucleic Acids Research , vol.33
    • Mignone, F.1    Grillo, G.2    Licciulli, F.3
  • 35
    • 53649108478 scopus 로고    scopus 로고
    • http://microrna.sanger.ac.uk/sequences/index.shtml
    • http://microrna.sanger.ac.uk/sequences/index.shtml
  • 38
    • 12144288006 scopus 로고    scopus 로고
    • A resource for large-scale RNA-interference-based screens in mammals
    • Paddison P. J., Silva J. M., Conklin D. S., A resource for large-scale RNA-interference-based screens in mammals Nature 2004 428 6981 427 431
    • (2004) Nature , vol.428 , Issue.6981 , pp. 427-431
    • Paddison, P.J.1    Silva, J.M.2    Conklin, D.S.3
  • 39
    • 33745577150 scopus 로고    scopus 로고
    • A mutation creating a potential illegitimate microRNA target site in the myostatin gene affects muscularity in sheep
    • Clop A., Marcq F., Takeda H., A mutation creating a potential illegitimate microRNA target site in the myostatin gene affects muscularity in sheep Nature Genetics 2006 38 7 813 818
    • (2006) Nature Genetics , vol.38 , Issue.7 , pp. 813-818
    • Clop, A.1    Marcq, F.2    Takeda, H.3
  • 40
    • 53649107838 scopus 로고    scopus 로고
    • http://snp500cancer.nci.nih.gov/
    • http://snp500cancer.nci.nih.gov/


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.