Molecular cloning and characterisation of the flavanone-3-hydroxylase gene from Korean black raspberry

Journal of Horticultural Science and Biotechnology

Volumn 83, Issue 5, 2008, Pages 595-602

  Baek, M H ^a   Chung, B Y ^a   Kim, J H ^a   Wi, S G ^a   An, B C ^a   Kim, J S ^a   Lee, S S ^a   Lee, I J ^b  

^a Korea Atomic Energy Research Institute   (South Korea)

^b Kyungpook National University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

RUBUS; RUBUS GLAUCUS; RUBUS OCCIDENTALIS;

EID: 53649083745     PISSN: 14620316     EISSN: None     Source Type: Journal    
DOI: 10.1080/14620316.2008.11512429     Document Type: Article

References (40)

1. ANDREWS, J., ADAMS, S. R., BURTON, K. S. and EVERED, C. E. (2002). Subcellular localization of peroxidase in tomato fruit skin and the possible implications for the regulation of fruit growth. Journal of Experimental Botany, 53, 2185-2191.
2. AZEVEDO, H., LINO-NETO, T. and TAVARES, M. (2003). An improved method for high-quality RNA isolation form needles of adult maritime pine trees. Plant Molecular Biology Reporter, 21, 333-338.
3. BALMER, L. A., BEVERIDGE, D. J., JAZAYERI, J. A., THOMSON, A. M., WALKER, C. E. and LEEDMAN, P. J. (2001). Identification of a novel AU-rich element in the 3′ untranslated region of epidermal growth receptor mRNA that is the target for regulated RNA-binding proteins. Molecular and Cellular Biology, 21, 2070-2084.
4. BOREJSZA-WYSOCKI, W. and HRAZDINA, G. (1994). Biosynthesis of p-hydroxyphenylbutan-2-one in raspberry fruits and tissue cultures. Phytochemistry, 35, 623-628.
5. BOSS, P. K., DAVIES, C. and ROBINSON, S. P. (1996). Analysis of the expression of anthocyanin pathway genes in developing Vitis vinifera L. cv Shiraz grape berries, and the implications for pathway regulation. Plant Physiology, 111, 1059-1066.
6. BRADFORD, M. M. (1976). A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Analytical Biochemistry, 72, 248-254.
7. BRITSCH, L., HELLER, W. and GRISEBACH, H. (1981). Conversion of flavanone to flavone, dihydroflavonol and flavonol with an enzyme system from cell cultures of parsley. Zeitschrift fuer Naturforschung Section C - A Journal of Biosciences, 36, 742-750.
8. CHA, H-S., LEE, M.-K., HWANG, J.-B., PARK, M.-S. and PARK, K.-M. (2001). Physicochemical characteristics of Rubus coreanus Miquel. Journal of the Korean Society of Food Science and Nutrition, 30, 1021-1025.
9. CHARRIER, B., CORONADO, C., KONDOROSI, A. and RATET, P. (1995). Molecular characterization and expression of alfalfa (Medicago sativa L.) flavanone-3-hydroxylase and dihydroflavonol-4- reductase encoding genes. Plant Molecular Biology, 29, 773-786.
10. CHEN, J. Y., WEN, P.-F., KONG, W. F., PAN, Q.-H., WAN, S.-B. and HUNG, W.-D. (2006). Changes and subcellular localization of the enzymes involved in phenylpropanoid metabolism during grape berry development. Journal of Plant Physiology, 163, 115-127.
11. DAVIES, K. M. (1993). A cDNA clone for flavanone 3-hydroxlase from Malus. Plant Physiology, 103, 291.
12. DEBOO, G. B., ALBERSEN, M. C. and TAYLOR, L. P. (1995). Flavanone 3-hydroxylase transcripts and flavonol accumulation are temporally coordinate in maize anther. The Plant Journal, 7, 703-713.
13. DOONER, H. K., ROBINS, T. and JORGENSEN, R. A. (1991). Genetic and developmental control of anthocyanin biosynthesis. Annual Review of Genetics, 25, 173-199.
14. DOYLE, J. J and DOYLE, J. L. (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissues. Phytochemical Bulletin, 19, 11-15.
15. FAMIANI, F., WALKER, R. P., TECSI, L., CHEN, Z. H., PROIETTI, P. and LEEGOOD, R. C. (2000). An immunohistochemical study of the compartmentation of metabolism during the development of grape (Vitis vinifera L.) berry. Journal of Experimental Botany, 51, 675-683.
16. FORKMANN, G., HELLER, W. and GRISEBACH, H. (1980). Anthocyanin biosynthesis in flowers of Matthiola incana. Flavanone 3- and flavonoid 3-hydroxylases. Zeitschrift fuer Naturforschung Section C-A Journal of Biosciences, 35, 691-695.
17. GONG, Z., YAMAZAKI, M., SUGIYAMA, M., TANAKA, Y. and SAITO, K. (1997). Cloning and molecular analysis of structural genes involved in anthocyanin biosynthesis and expressed in a formaspecific manner in Perilla frutescens. Plant Molecular Biology, 6, 915-927.
18. HARLOW, E. and LANE, D. (1988). Antibodies: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, USA. 321-358.
19. HELLER, W. and FORKMANN, G. (1994). Biosynthesis of flavonoids. In: The Flavonoids - Advances in Research Since 1986. (Harborne, J. B., Ed.). Chapman and Hall, London, UK. 499-535.
20. HIEBER, A. D., MUDALIGE-JAYAWICKRAMA, R. G. and KUEHNLE, A. R. (2006). Color genes in the orchid Oncidium 'Gower Ramsey': identification, expression, and potential genetic instability in an interspecific cross. Planta, 223, 521-531.
21. JAAKOLA, L., MÄÄTTÄ, K., PIRTTILÄ, A.M., TÖRRÖNEN, R., KÄRENLAMPI, S. and HOHTOLA, A. (2002). Expression of genes involved in anthocyanin biosynthesis in relation to anthocyanin, proanthocyanidin, and flavonol levels during bilberry fruit development. Plant Physiology, 130, 729-739.
22. JIN, Z., GROTEWOLD, E., QU, W., FU, G. and ZHAO, D. (2005). Cloning and characterization of a flavanone 3-hydroxylase gene from Saussurea medusa. DNA Sequence, 16, 121-129.
23. KOZAK, M. (1984). Compilation and analysis of sequences upstream from the translation start site in eukaryotic mRNAs. Nucleic Acids Research, 12, 857-872.
24. KUMAR, A. and ELLIS, B. E. (2001). The phenylalanine ammonialyase gene family in raspberry, structure, expression, and evolution. Plant Physiology, 127, 230-239.
25. ΔΔCt method. Methods, 25, 402-408.
26. LUKACIN, R. and BRITSCH, L. (1997). Identification of strictly conserved histidine and arginine residues as part of the active site in Petunia hybrida flavanone 3β-hydroxylase. European Journal of Biochemistry, 249, 748-757.
27. MANNING, K. (1998). Isolation of a set of ripening related genes from strawberry: their identification and possible relationship to fruit quality traits. Planta, 205, 622-631.
28. MARCHLER-BAUER, A. and BRYANT, S. H. (2004). CD-Search: protein domain annotations on the fly. Nucleic Acids Research, 32, 327-331.
29. MARTIN, C., PRESCOTT, A., MACKAY, S., BARTLETT, J. and VRIJLANDT, E. (1991). Control of anthocyanin biosynthesis in flowers of Antirrhinum majus. The Plant Journal, 1, 37-49.
30. MARTIN, T., OSWALD, O. and GRAHAM, I. A. (2002). Arabidopsis seedling growth, storage lipid mobilization, and photosynthetic gene expression are regulated by carbon: nitrogen availability. Plant Physiology, 128, 472-481.
31. MAZZA, G. and MINIATI, E. (1993). Anthocyanins in Fruits, Vegetables and Grains. CRC Press Inc., Boca Raton, FL, USA. 362 pp.
32. MELDGAARD, M. (1992). Expression of chalcone synthase, dihydroflavonol reductase and flavanone-3-hydroxylase in mutants of barley deficient in anthocyanidin and proanthocyanidin biosynthesis. Theoretical and Applied Genetics, 83, 695-706.
33. PELLETIER, M. K. and WINKEL-SHIRLEY, B. (1996). Analysis of flavanone 3-hydroxylase in Arabidopsis seedlings. Plant Physiology, 111, 339-345.
34. PELT, J. L., DOWNES, W. A., SCHOBORG, R. V. and MCINTOSH, C. A. (2003). Flavanone 3-hydroxylase expression in Citrus paradisi and Petunia hybrida seedlings. Phytochemistry, 64, 435-444.
35. PERKINS-VEAZIE, P. and NONNECKE, G. (1992). Physiological changes daring ripening of raspberry fruit. HortScience, 27, 331-333.
36. SHEN, G., PANG, Y., WU.W., DENG, Z., ZHAO, L., CAO, Y., SUN, X. and TANG, K. (2006). Cloning and characterization of a flavanone 3-hydroxylase gene from Ginkgo biloba. Bioscience Reports, 26, 19-29.
37. WI, S. G., SINGH, A. P. LEE, K. H. and KIM, Y. S. (2005). The pattern of distribution of pectin, peroxidase and lignin in the middle lamella of secondary xylem fibers in alfafa (Medicago saliva). Annals of Botany, 95, 863-868.
38. WINKEL-SHIRLEY, B. (2001). Flavonoid biosynthesis. A colorful model for genetics, biochemistry, cell biology, and biotechnology. Plant Physiology, 126, 485-493.
39. ZAFRA-STONE, S., YASMIN, T., BAGCHI, M., CHATTERJEE, A., VINSON, J. A. and BAGCHI, D. (2007). Berry anthocyanins as novel antioxidants in human health and disease prevention. Molecular Nutrition & Food Research, 51, 675-683.
40. ZHANG, Z., BARLOW, J. N., BALDWIN, J. E. and SCHOFIELD, C. J. (1997). Metal catalyzed oxidation and mutagenesis studies on the iron (II) binding site of 1-aminocyclopropane-1-carboxylate oxidase. Biochemistry, 36, 15999-16007.