Quantitative discrimination of 16 S rRNA genes of Dehalococcoides species by MagSNiPer, a quantitative single-nucleotide-polymorphism genotyping method

Biotechnology and Applied Biochemistry

Volumn 51, Issue 2, 2008, Pages 111-117

  Yohda, Masafumi ^a   Kobayashi, Ai ^a   Ohishi, Shoji ^a   Ebisawa, Maiko ^a   Sakihara, Sakari ^b,c   Kakihara, Fumiko ^a   Tojo, Yuriko ^c   Tajima, Hideji ^c   Nishimura, Minoru ^b  

^a TOKYO UNIVERSITY OF AGRICULTURE AND TECHNOLOGY   (Japan)

^b In Situ Solutions   (Japan)

^c Precision System Science Co Ltd   (Japan)

Author keywords

16 S rRNA genes; Chloroethenes; Dehalococcoides spp.; MagSNiPer; Single nucleotide polymorphism (SNP) genotyping method

Indexed keywords

BIOREMEDIATION; CHEMILUMINESCENCE; CLONING; COLLOIDS; COST EFFECTIVENESS; DECHLORINATION; ELECTROPHORESIS; GELATION; GENETIC ENGINEERING; GROUNDWATER; HYDROGEOLOGY; LIGHT EMISSION; LIGHT MEASUREMENT; LUMINESCENCE; MAGNETIC FIELD EFFECTS; MAGNETIC SEPARATION; NUCLEIC ACIDS; NUCLEOTIDES; ORGANIC ACIDS; POLYMORPHISM; SEPARATION;

16 S RRNA GENES; CHLOROETHENES; DEHALOCOCCOIDES SPP.; MAGSNIPER; SINGLE-NUCLEOTIDE-POLYMORPHISM (SNP) GENOTYPING METHOD;

GENES;

CHLOROETHANE; GROUND WATER; RIBOSOME RNA;

ANAEROBIC BACTERIUM; ARTICLE; AUTOANALYSIS; AUTOANALYZER; BIOREMEDIATION; CHEMOLUMINESCENCE; CLONING; CONTROLLED STUDY; DECHLORINATION; DEHALOCOCCOIDES; DENATURING GRADIENT GEL ELECTROPHORESIS; DNA PURIFICATION; GENE SEQUENCE; GENOTYPE; INTERMETHOD COMPARISON; MICROTITER PLATE ASSAY; NONHUMAN; NUCLEOTIDE SEQUENCE; QUANTITATIVE ANALYSIS; SEPARATION TECHNIQUE; SINGLE NUCLEOTIDE POLYMORPHISM;

CHLOROFLEXI; GENOTYPE; POLYMERASE CHAIN REACTION; POLYMORPHISM, SINGLE NUCLEOTIDE; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY;

DEHALOCOCCOIDES; DEHALOCOCCOIDES ETHENOGENES;

EID: 53549116222     PISSN: 08854513     EISSN: None     Source Type: Journal    
DOI: 10.1042/BA20070238     Document Type: Article

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