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Volumn 26, Issue 1, 2008, Pages 53-60

Molecular characterization of the HERV-W Env gene in humans and primates: Expression, FISH, phylogeny, and evolution

Author keywords

FISH; Gene expression; HERV W family; Human tissues; Primates; RT PCR

Indexed keywords

GAG PROTEIN; GENE PRODUCT; HUMAN ENDOGENOUS RETROVIRUS W PROTEIN; PROTEIN DERIVATIVE; PROTIEN POL; UNCLASSIFIED DRUG; MESSENGER RNA;

EID: 53449099744     PISSN: 10168478     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (14)

References (33)
  • 1
    • 0031582646 scopus 로고    scopus 로고
    • Comparative analysis of LTRs of the ERV-H family of primate-specific retrovirus-like elements isolated from marmoset, African green monkey, and man
    • Anderssen, S., Sjottem, E., Svineng, G., and Johansen, T. (1997). Comparative analysis of LTRs of the ERV-H family of primate-specific retrovirus-like elements isolated from marmoset, African green monkey, and man. Virology 234, 14-30.
    • (1997) Virology , vol.234 , pp. 14-30
    • Anderssen, S.1    Sjottem, E.2    Svineng, G.3    Johansen, T.4
  • 3
    • 0344450781 scopus 로고    scopus 로고
    • Molecular characterization and placental expression of HERV-W, a new human endogenous retrovirus family
    • Blond, J.L., Beseme, F., Duret, L., Bouton, O., Bedin, F., Perron, H., Mandrand, B., and Mallet, F. (1999). Molecular characterization and placental expression of HERV-W, a new human endogenous retrovirus family. J. Virol. 73, 1175-1185.
    • (1999) J. Virol , vol.73 , pp. 1175-1185
    • Blond, J.L.1    Beseme, F.2    Duret, L.3    Bouton, O.4    Bedin, F.5    Perron, H.6    Mandrand, B.7    Mallet, F.8
  • 4
    • 0036221249 scopus 로고    scopus 로고
    • Characterization of the intragenomic spread of the human endogenous retrovirus family HERV-W
    • Costas, J. (2002). Characterization of the intragenomic spread of the human endogenous retrovirus family HERV-W. Mol. Biol. Evol. 19, 526-533.
    • (2002) Mol. Biol. Evol , vol.19 , pp. 526-533
    • Costas, J.1
  • 5
    • 0033973992 scopus 로고    scopus 로고
    • Evolutionary history of the human endogenous retrovirus family ERV9
    • Costas, J., and Naveira, H. (2000). Evolutionary history of the human endogenous retrovirus family ERV9. Mol. Biol. Evol. 17, 320-330.
    • (2000) Mol. Biol. Evol , vol.17 , pp. 320-330
    • Costas, J.1    Naveira, H.2
  • 7
    • 3242658449 scopus 로고    scopus 로고
    • FISH mapping for helminth genome
    • S.E. Melville, ed, Totowa, USA: Human Press
    • Hirai, H., and Hirai, Y. (2004). FISH mapping for helminth genome. In Methods in Molecular Biology, Parasite Genomics Protocols, S.E. Melville, ed. (Totowa, USA: Human Press). 270, 379-394.
    • (2004) Methods in Molecular Biology, Parasite Genomics Protocols , vol.270 , pp. 379-394
    • Hirai, H.1    Hirai, Y.2
  • 8
    • 0031976956 scopus 로고    scopus 로고
    • Tandem duplication of nucleolus organizer region (NOR) in the Japanese macaque, Macaca fuscata fuscata
    • Hirai, H., Hasegawa, Y., Kawamoto, Y., and Tokita, E. (1998). Tandem duplication of nucleolus organizer region (NOR) in the Japanese macaque, Macaca fuscata fuscata. Chrom. Res. 6, 191-197.
    • (1998) Chrom. Res , vol.6 , pp. 191-197
    • Hirai, H.1    Hasegawa, Y.2    Kawamoto, Y.3    Tokita, E.4
  • 9
    • 0032730013 scopus 로고    scopus 로고
    • Genomic differentiation of 18S ribosomal DNA and β-satellite DNA in the hominoid and its evolutionary aspects
    • Hirai, H., Taguchi, T., and Godwin, A.K. (1999). Genomic differentiation of 18S ribosomal DNA and β-satellite DNA in the hominoid and its evolutionary aspects. Chrom. Res. 7, 531-540.
    • (1999) Chrom. Res , vol.7 , pp. 531-540
    • Hirai, H.1    Taguchi, T.2    Godwin, A.K.3
  • 10
    • 0034284437 scopus 로고    scopus 로고
    • Repbase update: A database and an electronic journal of repetitive elements
    • Jurka, J. (2000). Repbase update: a database and an electronic journal of repetitive elements. Trends Genet. 16, 418-420.
    • (2000) Trends Genet , vol.16 , pp. 418-420
    • Jurka, J.1
  • 11
    • 0032836382 scopus 로고    scopus 로고
    • Isolation and phylogeny of endogenous retrovirus sequences belonging to the HERV-W family in primates
    • Kim, H.-S., Takenaka, O., and Crow, T.J. (1999). Isolation and phylogeny of endogenous retrovirus sequences belonging to the HERV-W family in primates. J. Gen. Virol. 80, 2613-2619.
    • (1999) J. Gen. Virol , vol.80 , pp. 2613-2619
    • Kim, H.-S.1    Takenaka, O.2    Crow, T.J.3
  • 12
    • 0035694959 scopus 로고    scopus 로고
    • Sequence and phylogeny of HERV-W pol fragments
    • Kim, H.-S. (2001). Sequence and phylogeny of HERV-W pol fragments. AIDS Res. Hum. Retroviruses 17, 1665-1671.
    • (2001) AIDS Res. Hum. Retroviruses , vol.17 , pp. 1665-1671
    • Kim, H.-S.1
  • 13
    • 0034938544 scopus 로고    scopus 로고
    • Human endogenous retrovirus HERV-W family: Chromosomal localization, identification, and phylogeny
    • Kim, H.-S., and Lee, W.-H. (2001). Human endogenous retrovirus HERV-W family: chromosomal localization, identification, and phylogeny. AIDS Res. Hum. Retroviruses 17, 643-648.
    • (2001) AIDS Res. Hum. Retroviruses , vol.17 , pp. 643-648
    • Kim, H.-S.1    Lee, W.-H.2
  • 15
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K., and Nei, M. (2004). MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform. 5, 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 17
    • 0038178141 scopus 로고    scopus 로고
    • Activation of the human endogenous retrovirus W long terminal repeat by herpes simplex virus type 1 immediate early protein 1
    • Lee, W.J., Kwun, H.J., Kim, H.-S., and Jang, K.L. (2003). Activation of the human endogenous retrovirus W long terminal repeat by herpes simplex virus type 1 immediate early protein 1. Mol. Cells 15, 75-80.
    • (2003) Mol. Cells , vol.15 , pp. 75-80
    • Lee, W.J.1    Kwun, H.J.2    Kim, H.-S.3    Jang, K.L.4
  • 18
    • 0029938821 scopus 로고    scopus 로고
    • The viruses in all of us: Characteristics and biological significance of human endogenous retrovirus sequences
    • Lower, R., Lower, J., and Kurth, R. (1996). The viruses in all of us: characteristics and biological significance of human endogenous retrovirus sequences. Proc. Natl. Acad. Sci. USA 93, 5177-5184.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 5177-5184
    • Lower, R.1    Lower, J.2    Kurth, R.3
  • 19
    • 0028820282 scopus 로고
    • HERV-H endogenous retroviruses: Presence in the New World branch but amplification in the Old World primate lineage
    • Mager, D.L., and Freeman, J.D. (1995). HERV-H endogenous retroviruses: presence in the New World branch but amplification in the Old World primate lineage. Virology 10, 395-404.
    • (1995) Virology , vol.10 , pp. 395-404
    • Mager, D.L.1    Freeman, J.D.2
  • 20
    • 0035233660 scopus 로고    scopus 로고
    • Status of HERV in human cells: Expression and coding capacity of human proviruses
    • Mayer, J. (2001). Status of HERV in human cells: expression and coding capacity of human proviruses. Dev. Biol. 106, 439-441.
    • (2001) Dev. Biol , vol.106 , pp. 439-441
    • Mayer, J.1
  • 22
    • 0030966940 scopus 로고    scopus 로고
    • Direct evidence for the expression of multiple endogenous retroviruses in the synovial compartment in rheumatoid arthritis
    • Nakagawa, K., Brusic, V., McColl, G., and Harrison, L.C. (1997). Direct evidence for the expression of multiple endogenous retroviruses in the synovial compartment in rheumatoid arthritis. Arthritis Rheum. 40, 627-638.
    • (1997) Arthritis Rheum , vol.40 , pp. 627-638
    • Nakagawa, K.1    Brusic, V.2    McColl, G.3    Harrison, L.C.4
  • 23
    • 0035802397 scopus 로고    scopus 로고
    • Similar integration but different stability of Alus and LINEs in the human genome
    • Pavlíek, A., Jabbari, K., Paes, J., Paes, V., Hejnar, J., and Bernardi, G. (2001). Similar integration but different stability of Alus and LINEs in the human genome. Gene 276, 39-45.
    • (2001) Gene , vol.276 , pp. 39-45
    • Pavlíek, A.1    Jabbari, K.2    Paes, J.3    Paes, V.4    Hejnar, J.5    Bernardi, G.6
  • 25
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgins, D.G., and Gibson, T.J. (1994). CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22, 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 26
    • 0034108733 scopus 로고    scopus 로고
    • Identification and characterization of novel human endogenous retrovirus families by phylogenetic screening of the human genome mapping project database
    • Tristem, M. (2000). Identification and characterization of novel human endogenous retrovirus families by phylogenetic screening of the human genome mapping project database. J. Virol. 74, 3715-3730.
    • (2000) J. Virol , vol.74 , pp. 3715-3730
    • Tristem, M.1
  • 27
    • 0020320936 scopus 로고
    • Form and function of retroviral proviruses
    • Varmus, H.E. (1982). Form and function of retroviral proviruses. Science 216, 812-820.
    • (1982) Science , vol.216 , pp. 812-820
    • Varmus, H.E.1
  • 29
    • 0142071135 scopus 로고    scopus 로고
    • A method for the absolute quantification of cDNA using real time PCR
    • Whelan, J.A., Russel, N.B., and Whelan, M.A. (2003). A method for the absolute quantification of cDNA using real time PCR. J. Immunol. Meth. 278, 261-269.
    • (2003) J. Immunol. Meth , vol.278 , pp. 261-269
    • Whelan, J.A.1    Russel, N.B.2    Whelan, M.A.3
  • 30
    • 0035980047 scopus 로고    scopus 로고
    • Molecular cloning and phylogenetic analysis of the human endogenous retrovirus HERV-K long terminal repeat elements in various cancer cells
    • Yi, J.M., Kim, H.M., and Kim, H.-S. (2001). Molecular cloning and phylogenetic analysis of the human endogenous retrovirus HERV-K long terminal repeat elements in various cancer cells. Mol. Cells 12, 137-141.
    • (2001) Mol. Cells , vol.12 , pp. 137-141
    • Yi, J.M.1    Kim, H.M.2    Kim, H.-S.3
  • 31
    • 2442720089 scopus 로고    scopus 로고
    • Expression of the human endogenous retrovirus HERV-W family in various human tissues and cancer cells
    • Yi, J.M., Kim, H.M., and Kim, H.-S. (2004a). Expression of the human endogenous retrovirus HERV-W family in various human tissues and cancer cells. J. Gen. Virol. 85, 1203-1210.
    • (2004) J. Gen. Virol , vol.85 , pp. 1203-1210
    • Yi, J.M.1    Kim, H.M.2    Kim, H.-S.3
  • 32
    • 7544230404 scopus 로고    scopus 로고
    • Human endogenous retroviral elements belonging to the HERV-S family from human tissues, cancer cells, and primates: Expression, structure, phylogeny and evolution
    • Yi, J.M., Kim, T.H., Huh, J.W. Park, K.S., Jang, S.B., Kim, H.M., and Kim, H.S. (2004b). Human endogenous retroviral elements belonging to the HERV-S family from human tissues, cancer cells, and primates: expression, structure, phylogeny and evolution. Gene 342, 283-292.
    • (2004) Gene , vol.342 , pp. 283-292
    • Yi, J.M.1    Kim, T.H.2    Huh, J.W.3    Park, K.S.4    Jang, S.B.5    Kim, H.M.6    Kim, H.S.7
  • 33
    • 33845200444 scopus 로고    scopus 로고
    • Molecular genetic analyses of human endogenous retroviral elements belonging to the HERV-P family in primates, human tissues, and cancer cells
    • Yi, J.M., Schuebel, K., and Kim, H.-S. (2007). Molecular genetic analyses of human endogenous retroviral elements belonging to the HERV-P family in primates, human tissues, and cancer cells. Genomics 89, 1-9.
    • (2007) Genomics , vol.89 , pp. 1-9
    • Yi, J.M.1    Schuebel, K.2    Kim, H.-S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.