"TOF2H": A precision toolbox for rapid, high density/high coverage hydrogen-deuterium exchange mass spectrometry via an LC-MALDI approach, covering the data pipeline from spectral acquisition to HDX rate analysis
AB INITIO APPROACH;
AUTOMATED ASSESSMENT;
CONFORMATIONAL CHANGE;
DATA PROCESSING AND ANALYSIS;
HYDROGEN-DEUTERIUM EXCHANGE;
PROTEIN CONFORMATION;
SPECTRAL ACQUISITION;
SURFACE BINDING SITES;
AUTOMATION;
CONFORMATIONS;
DATA PROCESSING;
EMBEDDED SYSTEMS;
EXPERIMENTS;
HYDROGEN;
HYDROGEN BONDS;
MASS SPECTROMETRY;
PEPTIDES;
THREE DIMENSIONAL COMPUTER GRAPHICS;
DEUTERIUM;
DEUTERIUM;
HYDROGEN;
PEPTIDE;
SOLVENT;
PROTEIN;
AB INITIO CALCULATION;
ACCURACY;
ARTICLE;
AUTOMATION;
COMPUTER PROGRAM;
CONFORMATIONAL TRANSITION;
DEUTERIUM HYDROGEN EXCHANGE;
HYDROGEN BOND;
LIQUID CHROMATOGRAPHY;
MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY;
MOLECULAR LIBRARY;
PREDICTION;
PROTEIN CONFORMATION;
ALGORITHM;
CHEMISTRY;
INFORMATION RETRIEVAL;
MASS SPECTROMETRY;
METHODOLOGY;
SENSITIVITY AND SPECIFICITY;
ULTRASTRUCTURE;
ALGORITHMS;
CHROMATOGRAPHY, LIQUID;
DEUTERIUM EXCHANGE MEASUREMENT;
INFORMATION STORAGE AND RETRIEVAL;
PROTEIN CONFORMATION;
PROTEINS;
SENSITIVITY AND SPECIFICITY;
SOFTWARE;
SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;
Retention model for proteins in reversed-phase liquid chromatography
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Measurement of amide hydrogen exchange by MALDI-TOF mass spectrometry
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Automatic analysis of hydrogen/deuterium exchange mass spectra of peptides and proteins using calculations of isotopic distributions
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Automated extraction of backbone deuteration levels from amide H/2H mass spectrometry experiments
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Semi-automated analysis of hydrogen exchange mass spectra using HX-Express
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The Deuterator: Software for the determination of backbone amide deuterium levels from H/D exchange MS data
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HD Desktop: A web based software application for rapid analysis and visualization of hydrogen exchange mass spectra
Denver, CO, USA
Pascal BD Chalmers MJ Busby SA Griffin PR HD Desktop: A web based software application for rapid analysis and visualization of hydrogen exchange mass spectra ASMS Denver, CO, USA 2008.
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Efficient calculation of accurate masses of isotopic peaks
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A general-approach to calculating isotopic distributions for mass spectrometry
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Efficient approximate all-atom solvent accessible surface area method parameterized for folded and denatured protein conformations
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Thermostability of endo-1,4-β-xylanase II from Trichoderma reesei studied by electrospray ionization Fourier-transform ion cyclotron resonance MS, hydrogen/deuterium-exchange reactions and dynamic light scattering
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Janne J Juha R Matti L Ossi T Pirjo V Thermostability of endo-1,4-β-xylanase II from Trichoderma reesei studied by electrospray ionization Fourier-transform ion cyclotron resonance MS, hydrogen/deuterium-exchange reactions and dynamic light scattering Biochemical Journal 2001, 356:453-460. 1221856 11368772 10.1042/ 0264-6021:3560453
Hydrogen-deuterium exchange analyzed by matrix-assisted laser desorption-ionization mass spectrometry and the HET-s prion model
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