Arabidopsis nucleoside diphosphate kinase-2 as a plant GTPase activating protein ?

Journal of Biochemistry and Molecular Biology

Volumn 41, Issue 9, 2008, Pages 645-650

  Shen, Yu ^a   Han, Yun Jeong ^b   Kim, Jeong Il ^b,c   Song, Pill Soon ^a,c,d  

^a UNIVERSITY OF NEBRASKA LINCOLN   (United States)

^b Chonnam National University   (South Korea)

^c Gyeongsang National University   (South Korea)

^d Jeju National University   (South Korea)

Author keywords

Arabidopsis NDPK2; GTPase activating protein; Light signaling; Phytochrome; Plant NDPK; Small G protein

Indexed keywords

ARABIDOPSIS; MAMMALIA;

EID: 53349165256     PISSN: 12258687     EISSN: 02191024     Source Type: Journal    
DOI: 10.5483/bmbrep.2008.41.9.645     Document Type: Article

References (44)

1. Parks, R. E. J. and Agarwal, R. P. (1973) Nucleoside diphosphokinases. Enzymes 8, 307-334.
2. Zhu, J., Reynet, C., Caldwell, J. S. and Kahn, C. R. (1995) Characterization of Rad, a new member of Ras/GTPase superfamily, and its regulation by a unique GTPase-activating protein (GAP)-like activity. J. Biol. Chem. 270, 4805-4812.
3. Zhu, J., Tseng, Y.-H., Kantor, J. D., Rhodes, C. J., Zetter, B. R., Moyers, J. S. and Kahn, C. R. (1999) Interaction of the Ras-related protein associated with diabetes rad and the putative tumor metastasis suppressor NM23 provides a novel mechanism of GTPase regulation. Proc. Natl. Acad. Sci. U.S.A. 96, 14911-14918.
4. Otsuki, Y., Tanaka, M., Yoshii, S., Kawazoe, N., Nakaya, K. and Sugimura, H. (2001) Tumor metastasis suppressor nm23H1 regulates Rad GTPase by interaction with Tiam1. Proc. Natl. Acad. Sci. U.S.A. 98, 4385-4390.
5. Lutz, S., Hippe, H.-J., Niroomand, F. and Wieland, T. (2004) Nucleoside diphosphate kinase-mediated activation of heterotrimeric G proteins. Methods Enzymol. 390, 403-418.
6. Hippe, H.-J. and Wieland, T. (2006) High energy phosphate transfer by NDPK B/Gbetagammacomplexes-an alternative signaling pathway involved in the regulation of basal cAMP production. J. Bioenerg. Biomembr. 38, 197-203.
7. Kimura, N., Shimada, N., Ishijima, Y., Fukuda, M., Takagi, Y. and Ishikawa, N. (2003) Nucleoside diphosphate kinases in mammalian signal transduction systems: Recent development and perspective, J. Bioenerg. Biomembr. 35, 41-47.
8. Narayana, R. and Ramaswami, M. (2003) Regulation of Dynamin by Nucleoside Diphosphate Kinase. J. Bioenerg. Biomembr. 35, 49-55.
9. Postel, E. H. (2003) Multiple biochemical activities of NM23/NDP kinase in gene regulation. J. Bioenerg. Biomembr. 35, 31-40.
10. Hasunuma, K., Yabe, N., Yoshida, Y., Ogura, Y. and Hamada, T. (2003) Putative functions of nucleoside di-phosphate kinase in plants and fungi. J. Bioenerg. Biomembr. 35, 57-65.
11. Choi, G., Yi, H., Lee, J., Kwon, Y.-K., Soh, M.-S., Shin, B., Luka, Z., Hahn, T.-R. and Song, P.-S. (1999) Phytochrome signaling is mediated through nucleoside diphosphate kinase 2. Nature 401, 610-613.
12. Shen, Y., Kim, J.-l. and Song, P.-S. (2005) NDPK2 as a signal transducer in the phytochrome-mediated light signaling. J. Biol. Chem. 280, 5470-5479.
13. Im, Y. J., Kim, J.-l., Shen, Y., Na, Y., Han, Y.-J., Kim, S.-H., Song, P.-S. and Eom, S. H. (2004) Structural analysis of Arabidopsis thaliana nucleoside diphosphate kinase-2 for phytochrome-mediated light signaling. J. Mol. Biol. 343, 659-670.
14. Zimmermann, S., Baumann, A., Jaekel, K., Marbach, I., Engelberg, D. and Frohnmeyer, H. (1999) UV responsive genes of Arabidopsis revealed by similarity to the Gcn4 mediated UV response in yeast. J. Biol. Chem. 274, 17017-17024.
15. Moon, H., Lee, B., Choi, G., Shin, D., Prasad, D. T., Lee, O., Kwak, S.-S., Kim, D. H., Nam, J., Bahk, J., Hong, J. C., Lee, S. Y., Cho, M. J., Lim, C. O. and Yun, D.-J. (2003) NDP kinase 2 interacts with two oxidative stress-activated MAPKs to regulate cellular redox state and enhances multiple stress tolerance in transgenic plants. Proc. Natl. Acad. Sci. U.S.A. 100, 358-363.
16. Choi, G., Kim, J.-l., Hong, S. W., Shin, B., Blakeslee, J. J., Murphy, A. S., Seo, Y., Kim, K., Koh, E. J., Song, P.-S. and Lee, H. (2005) A possible role of NDPK2 in the regulation of auxin mediated responses for plant growth and development. Plant Cell Physiol. 46, 1246-1254.
17. Perfus-Barbeoch, L., Jones, A. M. and Assmann, S. M. (2004) Plant heterotrimeric G protein function: insights from Arabidopsis and rice mutants. Curr. Opin. Plant Biol. 7, 719-731.
18. Assmann, S. M. (2005) G proteins go green: A plant G protein signaling FAQ sheet. Science 310, 71-73.
19. Vernoud, V., Horton, A. C., Yang, Z. and Nielson, E. (2003) Analysis of the small GTPase gene superfamily of Arabidopsis. Plant Physiol. 131, 1191-1208.
20. Okamoto, H., Matsui, M. and Deng, X.-W. (2001) Overexpression of the heterotrimeric G-protein alpha-sub-unit enhances phytochrome-mediated inhibition if hypo-cotyls elongation in Arabidopsis. Plant Cell 13, 1639-1651.
21. Romero, L. C., Sommer, D., Gotor, C. and Song, P.-S. (1991) G-proteins in etiolated Avena seedlings, Possible phytochrome regulation. FEBS Lett. 282, 341-346.
22. Remero, L. C. and Lam, E. (1993) Guanine nucleotide binding protein involvement in early steps of phyto-chrome-regulated gene expression. Proc. Natl. Acad. Sci. U.S.A. 90, 1465-1469.
23. Neuhaus, G., Bowler, C., Kern, R. and Chua, N.-H. (1993) Calcium/calmodulin-dependent and -independent phyto-chrome signal transduction pathways. Cell 73, 937-952.
24. Sommer, D. and Song, P.-S. (1994) Isolation and purification of a small-molecular-weight GTP-binding protein from plants. Protein Expr. Purif. 5, 402-408.
25. Yoshida, K., Nagano, Y., Murai, N. and Sasaki, Y. (1993) Phytochrome-regulated expression of the genes encoding the small GTP-binding proteins in peas. Proc. Natl. Acad. Sci. U.S.A. 90, 6636-6640.
26. Nagano, Y., Okada, Y., Narita, H., Asaka, Y. and Sasaki, Y. (1995) Location of light-repressible, small GTP-binding protein of the YPT/rab family in the growing zone of the etiolated pea stems. Proc. Natl. Acad. Sci. U.S.A. 92, 6314-6318.
27. Inaba, T., Nagano, Y., Sakakibara, T. and Sasaki, Y. (1999) Identification of a cis-regulatory element involved in phytochrome down-regulated expression of the pea small GTPase gene pra2. Plant Physiol. 120, 491-499.
28. Kang, J.-G., Yun, J., Kim, D.-H., Chung, K.-S., Fujioka, S., Kim, J.-l., Dae, H.-W., Yoshida, S., Takatsuti, S., Song, P.-S. and Park, C.-M. (2001) Light and brassinosteroid signals are integrated via a dark-induced small G protein in etiolated seedling growth. Cell 105, 625-636.
29. Ma, H., Yanofsky, M. F. and Meyerowitz, E. M. (1990) Molecular cloning and characterization of GPA1, a G protein a subunit gene from Arabidopsis thaliana. Proc. Natl. Acad. Sci. U.S.A. 87, 3821-3825.
30. Ma, H. (2001) Plant G proteins: the different faces of GPA1. Curr. Biol. 11, 869-871.
31. Weiss, C. A., Garnaat, C. W., Mukai, K., Hu, Y. and Ma, H. (1994) Isolation of cDNAs encoding guanine nucleo-tide-binding protein β-subunit homologues from maize (ZGB1) and Arabidopsis (AGB1). Proc. Natl. Acad. Sci. U.S.A. 91, 9554-9558.
32. Mason, M. G. and Botella, J. R. (2000) Completing the heterotrimer: Isolation and characterization of an Arabidopsis thaliana G protein γ-subunit cNDA. Proc. Natl. Acad. Sci. U.S.A. 97, 14784-14788.
33. Mason, M. G. and Botella, J. R. (2001) Isolation of a novel G-protein γ-subunit from Arabidopsis thaliana and its interaction with Gβ. Biochim. Biophys. Acta 1520, 147-153.
34. Weiss, C. A., Huang, H. and Ma, H. (1993) Immunolocali-zation of the G-protein a subunit encoded by the GPA1 gene in Arabidopsis. Plant Cell 5, 1513-1528.
35. Obrdlik, P., Neuhaus, M. and Merkle, T. (2000) Plant heterotrimeric G protein beta subunit is associated with membranes via protein interactions involving coiled-coil formation. FEBS Lett. 476, 208-212.
36. Lapik, Y. R. and Kaufman, L. S. (2003) The Arabidopsis cubin domain protein AtPirin1 interacts with the G protein alpha-subunit GPA1 and regulates seed germination and early seedling development. Plant Cell 15, 1578-1590.
37. Ullah, H., Chen, J.-G., Temple, B., Boyes, D. C., Alonso, J. M., Davis, K. R., Ecker, J. R. and Jones, A. M. (2003) The β-subunit of the Arabidopsis G protein negatively regulates auxin-induced cell division and affects multiple development processes. Plant Cell 15, 393-409.
38. Chen, J.-G., Gao, Y. and Jones, A. M. (2006) Differential roles of Arabidopsis heterotrimeric G-protein subunits in modulating cell division in roots. Plant Physiol. 141, 887-897.
39. Anderson, D. J. and Botella, J. R. (2007) Expression analysis and subcellular localization of the Arabidopsis thaliana G protein β-subunit AGB1. Plant Ce// Rep. 26, 1469-1480.
40. Trusov, Y., Rookes, J. E., Tilbrook, K., Chakravorty, D., Mason, M. G., Anderson, D., Chen, J.-G., Jones, A. M. and Botella, J. R. (2007) Heterotrimeric G protein γ-sub-units provide functional selectivity in Gβγ dimmer signaling in Arabidopsis. Plant Cell 19, 1235-1250.
41. Wang, S., Narendra, S. and Fedoroff, N. (2007) Heterotrimeric G protein signaling in the Arabidopsis unfolded protein response. Proc. Natl. Acad. Sci. U.S.A. 104, 3817-3822.
42. Jones, A. M., Ecker, J. R. and Chen, J. G. (2003) A reevaluation of the role of the heterotrimeric G protein in coupling light responses in Arabidopsis. Plant Physiol. 131, 1623-1627.
43. Cuello, F., Schulze, R. A., Heemeyer, F., Meyer, H. E., Lutz, S., Jakobs, K. H., Niroomand, F. and Wieland, T. (2003) Activation of heterotrimeric G proteins by a high energy phosphate transfer via nucleoside diphosphate kinase (NDPK) B and Gβ subunits, Complex formation of NDPK B with Gβγ dimers and phosphorylation of His-266 in Gβ. J. Biol. Chem. 278, 7220-7226.
44. Northup, J. K., Smigel, M. D and Gilman, A. G. (1982) The guanine nucleotide activating site of the regulatory component of adenylate cyclase. J. Biol. Chem. 257, 11416-11423.