-
1
-
-
0024360096
-
Detection of BK virus and JC virus in urine and brain tissue by the polymerase chain reaction
-
Arthur, R. R., S. Dagostin, and K. V. Shah. 1989. Detection of BK virus and JC virus in urine and brain tissue by the polymerase chain reaction. J. Clin. Microbiol. 27:1174-1179.
-
(1989)
J. Clin. Microbiol
, vol.27
, pp. 1174-1179
-
-
Arthur, R.R.1
Dagostin, S.2
Shah, K.V.3
-
2
-
-
20044363947
-
Incidence of BK with tacrolimus versus cyclosporine and impact of preemptive immunosuppression reduction
-
Brennan, D. C., I. Agha, D. L. Bohl, M. A. Schnitzler, K. L. Hardinger, M. Lockwood, S. Torrence, R. Schuessler, T. Roby, M. Gaudreault-Keener, and G. A. Storch. 2005. Incidence of BK with tacrolimus versus cyclosporine and impact of preemptive immunosuppression reduction. Am. J. Transplant. 5:582-594.
-
(2005)
Am. J. Transplant
, vol.5
, pp. 582-594
-
-
Brennan, D.C.1
Agha, I.2
Bohl, D.L.3
Schnitzler, M.A.4
Hardinger, K.L.5
Lockwood, M.6
Torrence, S.7
Schuessler, R.8
Roby, T.9
Gaudreault-Keener, M.10
Storch, G.A.11
-
3
-
-
4544300181
-
Analysis of 15 novel full-length BK virus sequences from three individuals: Evidence of a high intra-strain genetic diversity
-
Chen, Y., P. M. Sharp, M. Fowkes, O. Kocher, J. T. Joseph, and I. J. Koralnik. 2004. Analysis of 15 novel full-length BK virus sequences from three individuals: evidence of a high intra-strain genetic diversity. J. Gen. Virol. 85:2651-2663.
-
(2004)
J. Gen. Virol
, vol.85
, pp. 2651-2663
-
-
Chen, Y.1
Sharp, P.M.2
Fowkes, M.3
Kocher, O.4
Joseph, J.T.5
Koralnik, I.J.6
-
4
-
-
0019636384
-
A comparative study of tests for homogeneity of variances, with applications to the outer continental shelf bidding data
-
Conover, W. J., M. E. Johnson, and M. M. Johnson. 1981. A comparative study of tests for homogeneity of variances, with applications to the outer continental shelf bidding data. Technometrics 23:351-361.
-
(1981)
Technometrics
, vol.23
, pp. 351-361
-
-
Conover, W.J.1
Johnson, M.E.2
Johnson, M.M.3
-
5
-
-
10644233814
-
BK virus infection in hematopoietic stem cell transplant recipients: Frequency, risk factors, and association with postengraftment hemorrhagic cystitis
-
Erard, V., B. Storer, L. Corey, J. Nollkamper, M.-L. Huang, A. Limaye, and M. Boeckh. 2004. BK virus infection in hematopoietic stem cell transplant recipients: frequency, risk factors, and association with postengraftment hemorrhagic cystitis. Clin. Infect. Dis. 39:1861-1865.
-
(2004)
Clin. Infect. Dis
, vol.39
, pp. 1861-1865
-
-
Erard, V.1
Storer, B.2
Corey, L.3
Nollkamper, J.4
Huang, M.-L.5
Limaye, A.6
Boeckh, M.7
-
6
-
-
53649101862
-
-
Felsenstein, J. 2007. PHYLIP Phylogeny Inference Package, version 3.4. Department of Genome Sciences, University of Washington, Seattle
-
Felsenstein, J. 2007. PHYLIP (Phylogeny Inference Package), version 3.4. Department of Genome Sciences, University of Washington, Seattle.
-
-
-
-
7
-
-
21144443075
-
Polyomavirus-associated nephropathy in renal transplantation: Interdisciplinary analyses and recommendations
-
Hirsch, H. H., D. C. Brennan, C. B. Drachenberg, F. Ginevri, J. Gordon, A. P. Limaye, M. J. Mihatsch, V. Nickeleit, E. Ramos, P. Randhawa, R. Shapiro, J. Steiger, M. Suthanthiran, and J. Trofe. 2005. Polyomavirus-associated nephropathy in renal transplantation: interdisciplinary analyses and recommendations. Transplantation 79:1277-1286.
-
(2005)
Transplantation
, vol.79
, pp. 1277-1286
-
-
Hirsch, H.H.1
Brennan, D.C.2
Drachenberg, C.B.3
Ginevri, F.4
Gordon, J.5
Limaye, A.P.6
Mihatsch, M.J.7
Nickeleit, V.8
Ramos, E.9
Randhawa, P.10
Shapiro, R.11
Steiger, J.12
Suthanthiran, M.13
Trofe, J.14
-
8
-
-
0035577457
-
Prospective monitoring of BK virus load after discontinuing sirolimus treatment in a renal transplant patient with BK virus nephropathy
-
Hirsch, H. H., M. Mohaupt, and T. Klimkait. 2001. Prospective monitoring of BK virus load after discontinuing sirolimus treatment in a renal transplant patient with BK virus nephropathy. J. Infect. Dis. 184:1494-1495.
-
(2001)
J. Infect. Dis
, vol.184
, pp. 1494-1495
-
-
Hirsch, H.H.1
Mohaupt, M.2
Klimkait, T.3
-
9
-
-
0035117408
-
-
Holmes, H., C. Davis, A. Heath, I. Hewlett, and N. Lelie. 2001. An international collaborative study to establish the 1st international standard for HIV-1 RNA for use in nucleic acid-based techniques. J. Virol. Methods 92:141-150.
-
(2001)
An international collaborative study to establish the 1st international standard for HIV-1 RNA for use in nucleic acid-based techniques. J. Virol. Methods
, vol.92
, pp. 141-150
-
-
Holmes, H.1
Davis, C.2
Heath, A.3
Hewlett, I.4
Lelie, N.5
-
10
-
-
33750276374
-
Identification of a genomic subgroup of BK polyomavirus spread in European populations
-
Ikegaya, H., P. J. Saukko, R. Tertti, K. P. Metsarinne, M. J. Carr, B. Crowley, K. Sakurada, H.-Y. Zheng, T. Kitamura, and Y. Yogo. 2006. Identification of a genomic subgroup of BK polyomavirus spread in European populations. J. Gen. Virol. 87:3201-3208.
-
(2006)
J. Gen. Virol
, vol.87
, pp. 3201-3208
-
-
Ikegaya, H.1
Saukko, P.J.2
Tertti, R.3
Metsarinne, K.P.4
Carr, M.J.5
Crowley, B.6
Sakurada, K.7
Zheng, H.-Y.8
Kitamura, T.9
Yogo, Y.10
-
11
-
-
0027184598
-
Genomic typing of BK virus in clinical specimens by direct sequencing of polymerase chain reaction products
-
Jin, L., P. E. Gibson, J. C. Booth, and J. P. Clewley. 1993. Genomic typing of BK virus in clinical specimens by direct sequencing of polymerase chain reaction products. J. Med. Virol. 41:11-17.
-
(1993)
J. Med. Virol
, vol.41
, pp. 11-17
-
-
Jin, L.1
Gibson, P.E.2
Booth, J.C.3
Clewley, J.P.4
-
12
-
-
0037298099
-
Treatment of refractory BK virus-associated nephropathy with cidofovir
-
Kadambi, P. V., M. A. Josephson, J. Williams, L. Corey, K. R. Jerome, S. M. Meehan, and A. P. Limaye. 2003. Treatment of refractory BK virus-associated nephropathy with cidofovir. Am. J. Transplant. 3:186-191.
-
(2003)
Am. J. Transplant
, vol.3
, pp. 186-191
-
-
Kadambi, P.V.1
Josephson, M.A.2
Williams, J.3
Corey, L.4
Jerome, K.R.5
Meehan, S.M.6
Limaye, A.P.7
-
13
-
-
0024410330
-
Serological typing scheme for BK-like isolates of human polyomavirus
-
Knowles, W. A., P. E. Gibson, and S. D. Gardner. 1989. Serological typing scheme for BK-like isolates of human polyomavirus. J. Med. Virol. 28:118-123.
-
(1989)
J. Med. Virol
, vol.28
, pp. 118-123
-
-
Knowles, W.A.1
Gibson, P.E.2
Gardner, S.D.3
-
14
-
-
33750562751
-
Prevalence of BK virus subtype I in Germany
-
Krumbholz, A., R. Zell, R. Egerer, A. Sauerbrei, A. Helming, B. Gruhn, and P. Wutzler. 2006. Prevalence of BK virus subtype I in Germany. J. Med. Virol. 78:1588-1598.
-
(2006)
J. Med. Virol
, vol.78
, pp. 1588-1598
-
-
Krumbholz, A.1
Zell, R.2
Egerer, R.3
Sauerbrei, A.4
Helming, A.5
Gruhn, B.6
Wutzler, P.7
-
15
-
-
33947195011
-
Real-time PCR diagnostics failure caused by nucleotide variability within exon 4 of the human cytomegalovirus major immediate-early gene
-
Lengerova, M., Z. Racil, P. Volfova, J. Lochmanova, J. Berkovcova, D. Dvorakova, J. Vorlicek, and J. Mayer. 2007. Real-time PCR diagnostics failure caused by nucleotide variability within exon 4 of the human cytomegalovirus major immediate-early gene. J. Clin. Microbiol. 45:1042-1044.
-
(2007)
J. Clin. Microbiol
, vol.45
, pp. 1042-1044
-
-
Lengerova, M.1
Racil, Z.2
Volfova, P.3
Lochmanova, J.4
Berkovcova, J.5
Dvorakova, D.6
Vorlicek, J.7
Mayer, J.8
-
16
-
-
0035371417
-
Quantitation of BK virus load in serum for the diagnosis of BK virus-associated nephropathy in renal transplant recipients
-
Limaye, A. P., K. R. Jerome, C. S. Kuhr, J. Ferrenberg, M. L. Huang, C. L. Davis, L. Corey, and C. L. Marsh. 2001. Quantitation of BK virus load in serum for the diagnosis of BK virus-associated nephropathy in renal transplant recipients. J. Infect. Dis. 183:1669-1672.
-
(2001)
J. Infect. Dis
, vol.183
, pp. 1669-1672
-
-
Limaye, A.P.1
Jerome, K.R.2
Kuhr, C.S.3
Ferrenberg, J.4
Huang, M.L.5
Davis, C.L.6
Corey, L.7
Marsh, C.L.8
-
17
-
-
33745607996
-
Evolution of BK virus based on complete genome data
-
Nishimoto, Y., T. Takasaka, M. Hasegawa, H.-Y. Zheng, Q. Chen, C. Sugimoto, T. Kitamura, and Y. Yogo. 2006. Evolution of BK virus based on complete genome data. J. Mol. Evol. 63:341-352.
-
(2006)
J. Mol. Evol
, vol.63
, pp. 341-352
-
-
Nishimoto, Y.1
Takasaka, T.2
Hasegawa, M.3
Zheng, H.-Y.4
Chen, Q.5
Sugimoto, C.6
Kitamura, T.7
Yogo, Y.8
-
18
-
-
33745586020
-
Subtype I BK polyomavirus strains grow more efficiently in human renal epithelial cells than subtype IV strains
-
Nukuzuma, S., T. Takasaka, H.-Y. Zheng, S. Zhong, Q. Chen, T. Kitamura, and Y. Yogo. 2006. Subtype I BK polyomavirus strains grow more efficiently in human renal epithelial cells than subtype IV strains. J. Gen. Virol. 87: 1893-1901.
-
(2006)
J. Gen. Virol
, vol.87
, pp. 1893-1901
-
-
Nukuzuma, S.1
Takasaka, T.2
Zheng, H.-Y.3
Zhong, S.4
Chen, Q.5
Kitamura, T.6
Yogo, Y.7
-
19
-
-
26944441263
-
Sequence diversity in the glycoprotein B gene complicates real-time PCR assays for detection and quantification of cytomegalovirus
-
Nye, M. B., A. R. Leman, M. E. Meyer, M. A. Menegus, and P. G. Rothberg. 2005. Sequence diversity in the glycoprotein B gene complicates real-time PCR assays for detection and quantification of cytomegalovirus. J. Clin. Microbiol. 43:4968-4971.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 4968-4971
-
-
Nye, M.B.1
Leman, A.R.2
Meyer, M.E.3
Menegus, M.A.4
Rothberg, P.G.5
-
20
-
-
35748932852
-
-
R Development Core Team, R Foundation for Statistical Computing, Vienna, Austria
-
R Development Core Team. 2007. R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria.
-
(2007)
R: A language and environment for statistical computing
-
-
-
21
-
-
0034201441
-
EMBOSS: The European Molecular Biology Open Software Suite
-
Rice, P., I. Longden, and A. Bleasby. 2000. EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet. 16:276-277.
-
(2000)
Trends Genet
, vol.16
, pp. 276-277
-
-
Rice, P.1
Longden, I.2
Bleasby, A.3
-
22
-
-
0035240915
-
An international collaborative study to establish a World Health Organization international standard for hepatitis B virus DNA nucleic acid amplification techniques
-
Saldanha, J., W. Gerlich, N. Lelie, P. Dawson, K. Heermann, and A. Heath. 2001. An international collaborative study to establish a World Health Organization international standard for hepatitis B virus DNA nucleic acid amplification techniques. Vox Sang. 80:63-71.
-
(2001)
Vox Sang
, vol.80
, pp. 63-71
-
-
Saldanha, J.1
Gerlich, W.2
Lelie, N.3
Dawson, P.4
Heermann, K.5
Heath, A.6
-
23
-
-
20544464818
-
A World Health Organization international standard for hepatitis A virus RNA nucleic acid amplification technology assays
-
Saldanha, J., A. Heath, N. Lelie, G. Pisani, and M.-Y. Yu. 2005. A World Health Organization international standard for hepatitis A virus RNA nucleic acid amplification technology assays. Vox Sang. 89:52-58.
-
(2005)
Vox Sang
, vol.89
, pp. 52-58
-
-
Saldanha, J.1
Heath, A.2
Lelie, N.3
Pisani, G.4
Yu, M.-Y.5
-
25
-
-
0002674151
-
Establishment of the first World Health Organization international standard for human parvovirus B19 DNA nucleic acid amplification techniques
-
Saldanha, J., N. Lelie, M. W. Yu, and A. Heath. 2002. Establishment of the first World Health Organization international standard for human parvovirus B19 DNA nucleic acid amplification techniques. Vox Sang. 82:24-31.
-
(2002)
Vox Sang
, vol.82
, pp. 24-31
-
-
Saldanha, J.1
Lelie, N.2
Yu, M.W.3
Heath, A.4
-
26
-
-
0036701609
-
External quality assessment program for qualitative and quantitative detection of hepatitis C virus RNA in diagnostic virology
-
Schirm, J., A. M. van Loon, E. Valentine-Thon, P. E. Klapper, J. Reid, and G. M. Cleator. 2002. External quality assessment program for qualitative and quantitative detection of hepatitis C virus RNA in diagnostic virology. J. Clin. Microbiol. 40:2973-2980.
-
(2002)
J. Clin. Microbiol
, vol.40
, pp. 2973-2980
-
-
Schirm, J.1
van Loon, A.M.2
Valentine-Thon, E.3
Klapper, P.E.4
Reid, J.5
Cleator, G.M.6
-
27
-
-
33748508417
-
Phylogenetic analysis of polyomavirus BK sequences
-
Sharma, P. M., G. Gupta, A. Vats, R. Shapiro, and P. Randhawa. 2006. Phylogenetic analysis of polyomavirus BK sequences. J. Virol. 80:8869-8879.
-
(2006)
J. Virol
, vol.80
, pp. 8869-8879
-
-
Sharma, P.M.1
Gupta, G.2
Vats, A.3
Shapiro, R.4
Randhawa, P.5
-
28
-
-
53649086115
-
-
Reference deleted
-
Reference deleted.
-
-
-
-
29
-
-
31644447531
-
Stability of the BK polyomavirus genome in renal-transplant patients without nephropathy
-
Takasaka, T., N. Goya, H. Ishida, K. Tanabe, H. Toma, T. Fujioka, S. Omori, H.-Y. Zheng, Q. Chen, S. Nukuzuma, T. Kitamura, and Y. Yogo. 2006. Stability of the BK polyomavirus genome in renal-transplant patients without nephropathy. J. Gen. Virol. 87:303-306.
-
(2006)
J. Gen. Virol
, vol.87
, pp. 303-306
-
-
Takasaka, T.1
Goya, N.2
Ishida, H.3
Tanabe, K.4
Toma, H.5
Fujioka, T.6
Omori, S.7
Zheng, H.-Y.8
Chen, Q.9
Nukuzuma, S.10
Kitamura, T.11
Yogo, Y.12
-
30
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
31
-
-
0036897941
-
Quality control in nucleic acid testing - where do we stand?
-
Valentine-Thon, E. 2002. Quality control in nucleic acid testing - where do we stand? J. Clin. Virol. 25(Suppl. 3):S13-S21.
-
(2002)
J. Clin. Virol
, vol.25
, Issue.SUPPL. 3
-
-
Valentine-Thon, E.1
-
32
-
-
0037439671
-
Quantitative viral load monitoring and cidofovir therapy for the management of BK virus-associated nephropathy in children and adults
-
Vats, A., R. Shapiro, P. Singh Randhawa, V. Scantlebury, A. Tuzuner, M. Saxena, M. L. Moritz, T. J. Beattie, T. Gonwa, M. D. Green, and D. Ellis. 2003. Quantitative viral load monitoring and cidofovir therapy for the management of BK virus-associated nephropathy in children and adults. Transplantation 75:105-112.
-
(2003)
Transplantation
, vol.75
, pp. 105-112
-
-
Vats, A.1
Shapiro, R.2
Singh Randhawa, P.3
Scantlebury, V.4
Tuzuner, A.5
Saxena, M.6
Moritz, M.L.7
Beattie, T.J.8
Gonwa, T.9
Green, M.D.10
Ellis, D.11
-
33
-
-
24644515414
-
Sequence variation in primer targets affects the accuracy of viral quantitative PCR
-
Whiley, D. M., and T. P. Sloots. 2005. Sequence variation in primer targets affects the accuracy of viral quantitative PCR. J. Clin. Virol. 34:104-107.
-
(2005)
J. Clin. Virol
, vol.34
, pp. 104-107
-
-
Whiley, D.M.1
Sloots, T.P.2
-
34
-
-
33846857961
-
Relationships between BK virus lineages and human populations
-
Zheng, H.-Y., Y. Nishimoto, Q. Chen, M. Hasegawa, S. Zhong, H. Ikegaya, N. Ohno, C. Sugimoto, T. Takasaka, T. Kitamura, and Y. Yogo. 2007. Relationships between BK virus lineages and human populations. Microbes Infect. 9:204-213.
-
(2007)
Microbes Infect
, vol.9
, pp. 204-213
-
-
Zheng, H.-Y.1
Nishimoto, Y.2
Chen, Q.3
Hasegawa, M.4
Zhong, S.5
Ikegaya, H.6
Ohno, N.7
Sugimoto, C.8
Takasaka, T.9
Kitamura, T.10
Yogo, Y.11
|