-
1
-
-
0029187589
-
BK virus and a new type of JC virus excreted by HIV-1 positive patients in rural Tanzania
-
Agostini, H. T., Brubaker, G. R., Shao, J., Levin, A., Ryschkewitsch, C. F., Blattner, W. A. & Stoner, G. L. (1995). BK virus and a new type of JC virus excreted by HIV-1 positive patients in rural Tanzania. Arch Virol 140, 1919-1934.
-
(1995)
Arch Virol
, vol.140
, pp. 1919-1934
-
-
Agostini, H.T.1
Brubaker, G.R.2
Shao, J.3
Levin, A.4
Ryschkewitsch, C.F.5
Blattner, W.A.6
Stoner, G.L.7
-
3
-
-
0034904994
-
Molecular genotyping of BK and JC viruses in human polyomavirus-associated interstitial nephritis after renal transplantation
-
Baksh, F. K., Finkelstein, S. D., Swalsky, P. A., Stoner, G. L., Ryschkewitsch, C. F. & Randhawa, P. (2001). Molecular genotyping of BK and JC viruses in human polyomavirus-associated interstitial nephritis after renal transplantation. Am J Kidney Dis 38, 354-365.
-
(2001)
Am J Kidney Dis
, vol.38
, pp. 354-365
-
-
Baksh, F.K.1
Finkelstein, S.D.2
Swalsky, P.A.3
Stoner, G.L.4
Ryschkewitsch, C.F.5
Randhawa, P.6
-
4
-
-
26444433210
-
Complete nucleotide sequence of polyomavirus SA12
-
Cantalupo, P., Doering, A., Sullivan, C. S., Pal, A., Peden, K. W. C., Lewis, A. M. & Pipas, J. M. (2005). Complete nucleotide sequence of polyomavirus SA12. J Virol 79, 13094-13104.
-
(2005)
J Virol
, vol.79
, pp. 13094-13104
-
-
Cantalupo, P.1
Doering, A.2
Sullivan, C.S.3
Pal, A.4
Peden, K.W.C.5
Lewis, A.M.6
Pipas, J.M.7
-
5
-
-
33644755935
-
Unique BK virus non-coding control region (NCCR) variants in hematopoietic stem cell transplant recipients with and without hemorrhagic cystitis
-
Carr, M. J., McCormack, G. P., Mutton, K. J. & Crowley, B. (2006). Unique BK virus non-coding control region (NCCR) variants in hematopoietic stem cell transplant recipients with and without hemorrhagic cystitis. J Med Virol 78, 485-493.
-
(2006)
J Med Virol
, vol.78
, pp. 485-493
-
-
Carr, M.J.1
McCormack, G.P.2
Mutton, K.J.3
Crowley, B.4
-
6
-
-
4544300181
-
Analysis of 15 novel full-length BK virus sequences from three individuals: Evidence of a high intra-strain genetic diversity
-
Chen, Y., Sharp, P. M., Fowkes, M., Kocher, O., Joseph, J. T. & Koralnik, I. J. (2004). Analysis of 15 novel full-length BK virus sequences from three individuals: evidence of a high intra-strain genetic diversity. J Gen Virol 85, 2651-2663.
-
(2004)
J Gen Virol
, vol.85
, pp. 2651-2663
-
-
Chen, Y.1
Sharp, P.M.2
Fowkes, M.3
Kocher, O.4
Joseph, J.T.5
Koralnik, I.J.6
-
7
-
-
33750274347
-
Subtype IV of the BK polyomavirus is prevalent in East Asia
-
10 other authors (in press). doi:10.1007/s00705-006-0814-z
-
Chen, Q., Zheng, H.-Y., Zhong, S. & 10 other authors (2006). Subtype IV of the BK polyomavirus is prevalent in East Asia. Arch Virol (in press). doi:10.1007/s00705-006-0814-z
-
(2006)
Arch Virol
-
-
Chen, Q.1
Zheng, H.-Y.2
Zhong, S.3
-
8
-
-
0020611190
-
Persistence of DNA sequences of BK virus and JC virus in normal human tissues and in diseased tissues
-
Chesters, P. M., Heritage, J. & McCance, D. J. (1983). Persistence of DNA sequences of BK virus and JC virus in normal human tissues and in diseased tissues. J Infect Dis 147, 676-684.
-
(1983)
J Infect Dis
, vol.147
, pp. 676-684
-
-
Chesters, P.M.1
Heritage, J.2
McCance, D.J.3
-
9
-
-
0030870701
-
Detection of BK polyomavirus genotypes in healthy and HIV-positive children
-
Di Taranto, C., Pietropaolo, V., Orsi, G. B., Jin, L., Sinibaldi, L. & Degener, A. M. (1997). Detection of BK polyomavirus genotypes in healthy and HIV-positive children. Eur J Epidemiol 13, 653-657.
-
(1997)
Eur J Epidemiol
, vol.13
, pp. 653-657
-
-
Di Taranto, C.1
Pietropaolo, V.2
Orsi, G.B.3
Jin, L.4
Sinibaldi, L.5
Degener, A.M.6
-
10
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
11
-
-
0019812890
-
The persistence of papovavirus BK DNA sequences in normal human renal tissue
-
Heritage, J., Chesters, P. M. & McCance, D. J. (1981). The persistence of papovavirus BK DNA sequences in normal human renal tissue. J Med Virol 8, 143-150.
-
(1981)
J Med Virol
, vol.8
, pp. 143-150
-
-
Heritage, J.1
Chesters, P.M.2
McCance, D.J.3
-
12
-
-
12044253190
-
An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis
-
Hillis, D. M. & Bull, J. J. (1993). An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Syst Biol 42, 182-192.
-
(1993)
Syst Biol
, vol.42
, pp. 182-192
-
-
Hillis, D.M.1
Bull, J.J.2
-
13
-
-
0031757669
-
Multiple sequence alignment with Clustal X
-
Jeanmougin, F., Thompson, J. D., Gouy, M., Higgins, D. G. & Gibson, T. J. (1998). Multiple sequence alignment with Clustal X. Trends Biochem Sci 23, 403-405.
-
(1998)
Trends Biochem Sci
, vol.23
, pp. 403-405
-
-
Jeanmougin, F.1
Thompson, J.D.2
Gouy, M.3
Higgins, D.G.4
Gibson, T.J.5
-
14
-
-
0027216465
-
Rapid genomic typing of BK virus directly from clinical specimens
-
Jin, L. (1993). Rapid genomic typing of BK virus directly from clinical specimens. Mol Cell Probes 7, 331-334.
-
(1993)
Mol Cell Probes
, vol.7
, pp. 331-334
-
-
Jin, L.1
-
15
-
-
0027393759
-
BK virus antigenic variants: Sequence analysis within the capsid VP1 epitope
-
Jin, L., Gibson, P. E., Knowles, W. A. & Clewley, J. P. (1993a). BK virus antigenic variants: sequence analysis within the capsid VP1 epitope. J Med Virol 39, 50-56.
-
(1993)
J Med Virol
, vol.39
, pp. 50-56
-
-
Jin, L.1
Gibson, P.E.2
Knowles, W.A.3
Clewley, J.P.4
-
16
-
-
0027184598
-
Genomic typing of BK virus in clinical specimens by direct sequencing of polymerase chain reaction products
-
Jin, L., Gibson, P. E., Booth, J. C. & Clewley, J. P. (1993b). Genomic typing of BK virus in clinical specimens by direct sequencing of polymerase chain reaction products. J Med Virol 41, 11-17.
-
(1993)
J Med Virol
, vol.41
, pp. 11-17
-
-
Jin, L.1
Gibson, P.E.2
Booth, J.C.3
Clewley, J.P.4
-
17
-
-
0028903177
-
Prevalence and distribution of BK virus subtypes in healthy people and immunocompromised patients detected by PCR-restriction enzyme analysis
-
Jin, L., Pietropaolo, V., Booth, J. C., Ward, K. H. & Brown, D. W. (1995). Prevalence and distribution of BK virus subtypes in healthy people and immunocompromised patients detected by PCR-restriction enzyme analysis. Clin Diagn Virol 3, 285-295.
-
(1995)
Clin Diagn Virol
, vol.3
, pp. 285-295
-
-
Jin, L.1
Pietropaolo, V.2
Booth, J.C.3
Ward, K.H.4
Brown, D.W.5
-
18
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
19
-
-
0025353669
-
High incidence of urinary JC virus excretion in nonimmunosuppressed older patients
-
Kitamura, T., Aso, Y., Kuniyoshi, N., Hara, K. & Yogo, Y. (1990). High incidence of urinary JC virus excretion in nonimmunosuppressed older patients. J Infect Dis 161, 1128-1133.
-
(1990)
J Infect Dis
, vol.161
, pp. 1128-1133
-
-
Kitamura, T.1
Aso, Y.2
Kuniyoshi, N.3
Hara, K.4
Yogo, Y.5
-
20
-
-
0002218308
-
The epidemiology of BK virus and the occurrence of antigenic and genomic subtypes
-
In Edited by K. Khalili & G. L. Stoner. New York: Wiley
-
Knowles, W. A. (2001). The epidemiology of BK virus and the occurrence of antigenic and genomic subtypes. In Human Polyomaviruses: Molecular and Clinical Perspectives, pp. 527-559. Edited by K. Khalili & G. L. Stoner. New York: Wiley.
-
(2001)
Human Polyomaviruses: Molecular and Clinical Perspectives
, pp. 527-559
-
-
Knowles, W.A.1
-
21
-
-
0002213482
-
Molecular biology of BK virus and clinical and basic aspects of BK virus renal infection
-
In Edited by K. Khalili & G. L. Stoner. New York: Wiley
-
Moens, U. & Rekvig, O. P. (2001). Molecular biology of BK virus and clinical and basic aspects of BK virus renal infection. In Human Polyomaviruses: Molecular and Clinical Perspectives, pp. 359-408. Edited by K. Khalili & G. L. Stoner. New York: Wiley.
-
(2001)
Human Polyomaviruses: Molecular and Clinical Perspectives
, pp. 359-408
-
-
Moens, U.1
Rekvig, O.P.2
-
22
-
-
33745607996
-
Evolution of BK virus based on complete genome data
-
(in press). doi:10.1007/s00239-005-0092-5
-
Nishimoto, Y., Takasaka, T., Hasegawa, M., Zheng, H. Y., Qin, C., Sugimoto, C., Kitamura, T. & Yogo, Y. (2006). Evolution of BK virus based on complete genome data. J Mol Evol (in press). doi:10.1007/ s00239-005-0092-5
-
(2006)
J Mol Evol
-
-
Nishimoto, Y.1
Takasaka, T.2
Hasegawa, M.3
Zheng, H.Y.4
Qin, C.5
Sugimoto, C.6
Kitamura, T.7
Yogo, Y.8
-
23
-
-
0029853148
-
WWW-Query: An on-line retrieval system for biological sequence banks
-
Perrière, G. & Gouy, M. (1996). WWW-Query: an on-line retrieval system for biological sequence banks. Biochimie 78, 364-369.
-
(1996)
Biochimie
, vol.78
, pp. 364-369
-
-
Perrière, G.1
Gouy, M.2
-
25
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
26
-
-
0018611461
-
The genome of human papovavirus BKV
-
Seif, I., Khoury, G. & Dhar, R. (1979). The genome of human papovavirus BKV. Cell 18, 963-977.
-
(1979)
Cell
, vol.18
, pp. 963-977
-
-
Seif, I.1
Khoury, G.2
Dhar, R.3
-
27
-
-
0025609870
-
Regulatory DNA sequence conserved in the course of BK virus evolution
-
Sugimoto, C., Hara, K., Taguchi, F. & Yogo, Y. (1990). Regulatory DNA sequence conserved in the course of BK virus evolution. J Mol Evol 31, 485-492.
-
(1990)
J Mol Evol
, vol.31
, pp. 485-492
-
-
Sugimoto, C.1
Hara, K.2
Taguchi, F.3
Yogo, Y.4
-
28
-
-
0030745902
-
Typing of urinary JC virus DNA offers a novel means of tracing human migrations
-
16 other authors
-
Sugimoto, C., Kitamura, T., Guo, J. & 16 other authors (1997). Typing of urinary JC virus DNA offers a novel means of tracing human migrations. Proc Natl Acad Sci U S A 94, 9191-9196.
-
(1997)
Proc Natl Acad Sci U S A
, vol.94
, pp. 9191-9196
-
-
Sugimoto, C.1
Kitamura, T.2
Guo, J.3
-
29
-
-
5444221918
-
Subtypes of BK virus prevalent in Japan and variation in their transcriptional control region
-
14 other authors
-
Takasaka, T., Goya, N., Tokumoto, T. & 14 other authors (2004). Subtypes of BK virus prevalent in Japan and variation in their transcriptional control region. J Gen Virol 85, 2821-2827.
-
(2004)
J Gen Virol
, vol.85
, pp. 2821-2827
-
-
Takasaka, T.1
Goya, N.2
Tokumoto, T.3
-
30
-
-
0024577034
-
Nucleotide sequence of the human polyomavirus AS virus, an antigenic variant of BK virus
-
Tavis, J. E., Walker, D. L., Gardner, S. D. & Frisque, R. J. (1989). Nucleotide sequence of the human polyomavirus AS virus, an antigenic variant of BK virus. J Virol 63, 901-911.
-
(1989)
J Virol
, vol.63
, pp. 901-911
-
-
Tavis, J.E.1
Walker, D.L.2
Gardner, S.D.3
Frisque, R.J.4
-
31
-
-
0018802163
-
BK virus DNA: Complete nucleotide sequence of a human tumor virus
-
Yang, R. C. & Wu, R. (1979). BK virus DNA: complete nucleotide sequence of a human tumor virus. Science 206, 456-462.
-
(1979)
Science
, vol.206
, pp. 456-462
-
-
Yang, R.C.1
Wu, R.2
-
32
-
-
2442471217
-
JC virus genotyping offers a new paradigm in the study of human populations
-
Yogo, Y., Sugimoto, C., Zheng, H.-Y., Ikegaya, H., Takasaka, T. & Kitamura, T. (2004). JC virus genotyping offers a new paradigm in the study of human populations. Rev Med Virol 14, 179-191.
-
(2004)
Rev Med Virol
, vol.14
, pp. 179-191
-
-
Yogo, Y.1
Sugimoto, C.2
Zheng, H.-Y.3
Ikegaya, H.4
Takasaka, T.5
Kitamura, T.6
|