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Volumn 5147 LNCS, Issue , 2008, Pages 65-80

On the computational power of biochemistry

Author keywords

[No Author keywords available]

Indexed keywords

ALGEBRA; BIOCHEMISTRY; BIOLOGY; BOOLEAN ALGEBRA; CHLORINE COMPOUNDS; MATRIX ALGEBRA;

EID: 52949151220     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-85101-1_6     Document Type: Conference Paper
Times cited : (31)

References (18)
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    • On the Computational Power of Brane Calculi
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    • Busi, N., Gorrieri, R.: On the Computational Power of Brane Calculi. In: Priami, C., Plotkin, G. (eds.) Transactions on Computational Systems Biology VI. LNCS (LNBI), vol. 4220, pp. 16-43. Springer, Heidelberg (2006)
    • (2006) Transactions on Computational Systems Biology VI. LNCS (LNBI) , vol.4220 , pp. 16-43
    • Busi, N.1    Gorrieri, R.2
  • 2
    • 52949135165 scopus 로고    scopus 로고
    • Cardelli, L.: Artificial Biochemistry. In: Proc. of Algorithmic Bioprocesses. LNCS (to appear, 2008), http://lucacardelli.name
    • Cardelli, L.: Artificial Biochemistry. In: Proc. of Algorithmic Bioprocesses. LNCS (to appear, 2008), http://lucacardelli.name
  • 3
    • 38649092709 scopus 로고    scopus 로고
    • On Process Rate Semantics
    • in press
    • Cardelli, L.: On Process Rate Semantics. Theoretical Computer Science (in press, 2008), http://dx.doi.org/10.1016/j.tes.2007.11.012
    • (2008) Theoretical Computer Science
    • Cardelli, L.1
  • 5
    • 38049153040 scopus 로고    scopus 로고
    • Credi, A., Garavelli, M., Laneve, C., Pradalier, S., Silvi, S., Zavattaro, G.: Moderation and Simulation of Nano Devices in nano-kappa Calculus. In: Calder, M., Gilmore, S. (eds.) CMSB 2007. LNCS (LNBI), 4695, pp. 168-183. Springer, Heidelberg (2007)
    • Credi, A., Garavelli, M., Laneve, C., Pradalier, S., Silvi, S., Zavattaro, G.: Moderation and Simulation of Nano Devices in nano-kappa Calculus. In: Calder, M., Gilmore, S. (eds.) CMSB 2007. LNCS (LNBI), vol. 4695, pp. 168-183. Springer, Heidelberg (2007)
  • 8
    • 23444439817 scopus 로고    scopus 로고
    • Using process diagrams for the graphical representation of biological networks
    • Kitano, H., Funahashi, A., Matsuoka, Y., Oda, K.: Using process diagrams for the graphical representation of biological networks. Nature Biotechnolgy 23, 961-966 (2005)
    • (2005) Nature Biotechnolgy , vol.23 , pp. 961-966
    • Kitano, H.1    Funahashi, A.2    Matsuoka, Y.3    Oda, K.4
  • 9
    • 30044440098 scopus 로고    scopus 로고
    • Molecular interaction maps of bioregulatory networks: A general rubric for systems biology
    • Kohn, K.W., Aladjem, M.I., Weinstein, J.N., Pommier, Y.: Molecular interaction maps of bioregulatory networks: a general rubric for systems biology. Molecular biology of the cell 17(1), 1-13 (2006)
    • (2006) Molecular biology of the cell , vol.17 , Issue.1 , pp. 1-13
    • Kohn, K.W.1    Aladjem, M.I.2    Weinstein, J.N.3    Pommier, Y.4
  • 10
    • 38049022095 scopus 로고    scopus 로고
    • Liekens, A.M.L., Fernando, C.T.: Turing complete catalytic particle computers. In: Almeida e Costa, F., Rocha, L.M., Costa, E., Harvey, I., Coutinho, A. (eds.) ECAL 2007. LNCS (LNAI), 4648, pp. 1202-1211. Springer, Heidelberg (2007)
    • Liekens, A.M.L., Fernando, C.T.: Turing complete catalytic particle computers. In: Almeida e Costa, F., Rocha, L.M., Costa, E., Harvey, I., Coutinho, A. (eds.) ECAL 2007. LNCS (LNAI), vol. 4648, pp. 1202-1211. Springer, Heidelberg (2007)
  • 11
    • 4243223597 scopus 로고    scopus 로고
    • Chemical Kinetics is Turing Universal
    • Magnasco, M.O.: Chemical Kinetics is Turing Universal. Physical Review Letters 78, 1190-1193 (1997)
    • (1997) Physical Review Letters , vol.78 , pp. 1190-1193
    • Magnasco, M.O.1
  • 12
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    • Stochastic approach to chemical kinetics
    • McQuarrie, D.A.: Stochastic approach to chemical kinetics. Journal of Applied Probability 4, 413-478 (1967)
    • (1967) Journal of Applied Probability , vol.4 , pp. 413-478
    • McQuarrie, D.A.1
  • 15
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    • Priami, C., Quaglia, P.: Beta Binders for Biological Interactions. In: Danos, V., Schachter, V. (eds.) CMSB 2004. LNCS (LNBI), 3082, pp. 20-33. Springer, Heidelberg (2005)
    • Priami, C., Quaglia, P.: Beta Binders for Biological Interactions. In: Danos, V., Schachter, V. (eds.) CMSB 2004. LNCS (LNBI), vol. 3082, pp. 20-33. Springer, Heidelberg (2005)
  • 16
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    • Application of a stochastic name-passing calculus to representation and simulation of molecular processes
    • Priami, C., Regev, A., Shapiro, E., Silverman, W.: Application of a stochastic name-passing calculus to representation and simulation of molecular processes. Information Processing Letters 80, 25-31 (2001)
    • (2001) Information Processing Letters , vol.80 , pp. 25-31
    • Priami, C.1    Regev, A.2    Shapiro, E.3    Silverman, W.4
  • 17
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    • Computation with Finite Stochastic Chemical Reaction Networks
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    • Soloveichik, D., Cook, M., Winfree, E., Bruck, J.: Computation with Finite Stochastic Chemical Reaction Networks. Natural Computing (in press, 2008), http://dx.doi.org/10.1007/s11047-008-9067-y
    • (2008) Natural Computing
    • Soloveichik, D.1    Cook, M.2    Winfree, E.3    Bruck, J.4


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