Influenza A virus M1 protein structure probed by in situ limited proteolysis with bromelain

Protein and Peptide Letters

Volumn 15, Issue 9, 2008, Pages 922-930

  Kordyukova, L V ^a   Serebryakova, M V ^b   Polyakov, V Y ^a   Ovchinnikova, T V ^c   Smirnova, Yu A ^a   Fedorova, N V ^a   Baratova, L A ^a  

^a MOSCOW STATE UNIVERSITY   (Russian Federation)

^b Federal Agency for Health Care and Social Development   (Russian Federation)

^c SHEMYAKIN OVCHINNIKOV INSTITUTE OF BIOORGANIC CHEMISTRY   (Russian Federation)

Author keywords

Bromelain; Influenza A virus; M1 protein; MALDI TOF MS; Transmission electron microscopy

Indexed keywords

BROMELAIN; INFLUENZA VIRUS HEMAGGLUTININ; M1 PROTEIN, INFLUENZA A VIRUS; MATRIX PROTEIN; SIALIDASE; TRYPSIN;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; GENETICS; HYDROLYSIS; INFLUENZA VIRUS A H1N1; INFLUENZA VIRUS A H3N2; MASS SPECTROMETRY; METABOLISM; MOLECULAR GENETICS; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN CONFORMATION; SEQUENCE ANALYSIS; TRANSMISSION ELECTRON MICROSCOPY; VIRION; X RAY CRYSTALLOGRAPHY;

AMINO ACID SEQUENCE; BROMELAINS; CRYSTALLOGRAPHY, X-RAY; ELECTROPHORESIS, POLYACRYLAMIDE GEL; HEMAGGLUTININ GLYCOPROTEINS, INFLUENZA VIRUS; HYDROLYSIS; INFLUENZA A VIRUS, H1N1 SUBTYPE; INFLUENZA A VIRUS, H3N2 SUBTYPE; MICROSCOPY, ELECTRON, TRANSMISSION; MOLECULAR SEQUENCE DATA; NEURAMINIDASE; PROTEIN CONFORMATION; SEQUENCE ANALYSIS, PROTEIN; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; TRYPSIN; VIRAL MATRIX PROTEINS; VIRION;

INFLUENZA A VIRUS; INFLUENZAVIRUS A;

EID: 52749083871     PISSN: 09298665     EISSN: None     Source Type: Journal    
DOI: 10.2174/092986608785849254     Document Type: Article

References (32)

1. Lamb, R.A.; Krug, R.M. (2001) Orthomyxoviridae: the viruses and their replication, in Fundamental virology, 4th ed. //(Knipe, D.M. and Howley, P.M., Ed). pp. 725-769. Lippincott Williams and Wilkins, Philadelphia, Pa.
2. Enami, M. and Enami, K. (1996) J. Virol., 70, 6653-6657.
3. Jin, H., Leser, G.P., Zhang, J. and Lamb, R.A. (1997) EMBO J., 16, 1236-1247.
4. Ali, A., Avalos, R.T., Ponimaskin, E. and Nayak, D.P. (2000) J. Virol., 74, 8709-8719.
5. Barman, S., Ali, A., Hui, E.K., Adhikary, L. and Nayak, D.P. (2001) Virus Res., 77, 61-69.
6. Iwatsuki-Horimoto, K., Horimoto, T., Noda, T., Kiso, M., Maeda, J., Watanabe, S., Muramoto, Y., Fujii, K. and Kawaoka, Y. (2006) J. Virol., 80, 5233-5240.
7. Zhang, J., Leser, G.P., Pekosz, A. and Lamb, R.A. (2000) Virology, 269, 325-334.
8. Ye, Z.P., Baylor, N.W. and Wagner, R.R. (1989) J. Virol., 63, 3586-3594.
9. Wakefield, L. and Brownlee, G.G. (1989) Nucleic Acids Res., 17, 8569-8580.
10. Gómez-Puertas, P., Albo, C., Pérez-Pastrana, E., Vivo, A., Portela, A. (2000) J. Virol., 74, 11538-11547.
11. Chen, B.J., Leser, G.P., Morita, E. and Lamb, R.A. (2007) J. Virol., 81, 7111-7123.
12. Ruigrok, R.W., Barge, A., Durrer, P., Brunner, J., Ma, K. and Whittaker, G.R. (2000) Virology, 267, 289-298.
13. Sha, B. and Luo, M. (1997) Nat. Struct. Biol., 4, 239-244.
14. Arzt, S., Baudin, F., Barge, A., Timmins, P., Burmeister, W.P. and Ruigrok, R.W. (2001) Virology, 279, 439-446.
15. Harris, A., Forouhar, F., Qiu, S., Sha, B. and Luo, M. (2001) Virology, 289, 34-44.
16. Shishkov, A.V., Goldanskii, V.I., Baratova, L.A., Fedorova, N.V., Ksenofontov, A.L., Zhirnov, O.P. and Galkin, A.V. (1999) Proc. Natl. Acad. Sci. USA, 96, 7827-7830.
17. Brand, C.M. and Skehel, J.J. (1972) Nat. New Biol., 238, 145-147.
18. Kordyukova, L.V., Ksenofontov, A.L., Serebryakova, M.V., Ovchinnikova, T.V., Fedorova, N.V., Ivanova, V.T. and Baratova, L.A. (2004) Protein Pept. Lett., 11, 385-391.
19. Serebryakova, M.V., Kordyukova, L.V., Baratova, L.A. and Markushin, S.G. (2006) Eur. J. Mass Spectrom., 12, 51-62.
20. Lowry, O.H., Rosebrough, N.J., Farr, A.L. and Randall, R.J. (1951) J. Biol. Chem., 193, 265-275.
21. Peterson, G.L. (1977) Anal. Biochem., 83, 346-356.
22. Laemmli, U.K. (1970) Nature, 227, 680-685.
23. Zhirnov, O. P. (1992) Virology, 186, 324-330.
24. Jensen, O.N., Wilm, M., Shevchenko, A. and Mann, M. (1999) Methods Mol. Biol., 112, 513-530.
25. Wilson, I.A., Skehel, J.J. and Wiley, D.C. (1981) Nature, 289, 366-373.
26. Arbatskii, N.P., Zheltova, A.P., Iurtov, D.V., Derevitskaia, V.A. and Kochetkov, N.K. (1989) Dokl. Akad. Nauk SSSR, 306, 1490-1493.
27. Choe, Y., Leonetti, F., Greenbaum, D.C., Lecaille, F., Bogyo, M., Bro(ë)mme, D., Ellman, J.A. and Craik, C.S. (2006) J. Biol. Chem., 281, 12824-12832.
28. Hui, E.K.-W., Barman, S., Tang, D.H.-P., France, B. and Nayak, D.P. (2006) J. Virol., 80, 2291-2308.
29. Gregoriades, A. and Frangione, B. (1981) J. Virol., 40, 323-328.
30. Fujiyoshi, Y., Kume, N.P., Sakata, K. and Sato, S.B. (1994) EMBO J., 13, 318-326.
31. Baudin, F., Petit, I., Weissenhorn, W. and Ruigrok, R.W. (2001) Virology, 281, 102-108.
32. Smirnova, Yu.A., Kordyukova, L.V., Serebryakova, M.V., Filippova, I.Yu., Lysogorskaya, E.N. and Baratova, L.A. (2008) Russian J. Bioorg. Chem., 34 (3), 369-374.