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Volumn 15, Issue 8, 2008, Pages 947-964

Descendants of whole genome duplication within gene order phylogeny

Author keywords

Molecular evolution; Sequence analysis; Statistics

Indexed keywords

CANDIDA GLABRATA; CONFERENCE PAPER; GENE DUPLICATION; GENE IDENTIFICATION; GENE ORDER; GENE REARRANGEMENT; GENE SEQUENCE; GENE STRUCTURE; GENE TRANSLOCATION; GENETIC ALGORITHM; GENETIC DISTANCE; GENOME; MATHEMATICAL GENETICS; MOLECULAR PHYLOGENY; NONHUMAN; PHYLOGENETIC TREE; POLYPLOIDY; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE; SIMULATION; SPECIES DIFFERENTIATION;

EID: 52449125941     PISSN: 10665277     EISSN: None     Source Type: Journal    
DOI: 10.1089/cmb.2008.0118     Document Type: Conference Paper
Times cited : (11)

References (21)
  • 1
    • 42349094694 scopus 로고    scopus 로고
    • The ABCs of MGR with DCJ
    • Adam, Z., and Sankoff, D. 2008. The ABCs of MGR with DCJ. Evol. Bioinform. 4, 69-74.
    • (2008) Evol. Bioinform , vol.4 , pp. 69-74
    • Adam, Z.1    Sankoff, D.2
  • 3
    • 0036143403 scopus 로고    scopus 로고
    • Genome-scale evolution: Reconstructing gene orders in the ancestral species
    • Bourque, G., and Pevzner, P. 2002. Genome-scale evolution: reconstructing gene orders in the ancestral species. Genome Res. 12, 26-36.
    • (2002) Genome Res , vol.12 , pp. 26-36
    • Bourque, G.1    Pevzner, P.2
  • 4
    • 25844471721 scopus 로고    scopus 로고
    • The Yeast Gene Order Browser: Combining curated homology and syntenic context reveals gene fate in polyploid species
    • Byrne, K.P., and Wolfe, K.H. 2005. The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res. 15, 1456-1461.
    • (2005) Genome Res , vol.15 , pp. 1456-1461
    • Byrne, K.P.1    Wolfe, K.H.2
  • 5
    • 33744822985 scopus 로고    scopus 로고
    • Widespread genome duplications throughout the history of flowering plants
    • Cui, L., Wall, P.K., Leebens-Mack, J.H., et al. 2006. Widespread genome duplications throughout the history of flowering plants. Genome Res. 16, 738-749.
    • (2006) Genome Res , vol.16 , pp. 738-749
    • Cui, L.1    Wall, P.K.2    Leebens-Mack, J.H.3
  • 6
    • 3042720475 scopus 로고    scopus 로고
    • Genome evolution in yeasts
    • Dujon, B., Sherman, D., Fischer, G., et al. 2004. Genome evolution in yeasts. Nature 430, 35-44.
    • (2004) Nature , vol.430 , pp. 35-44
    • Dujon, B.1    Sherman, D.2    Fischer, G.3
  • 7
    • 84957686900 scopus 로고    scopus 로고
    • Hybridization and genome rearrangement
    • El-Mabrouk, N., and Sankoff, D. 1999. Hybridization and genome rearrangement. Lect. Notes Comput. Sci. 1645, 78-87.
    • (1999) Lect. Notes Comput. Sci , vol.1645 , pp. 78-87
    • El-Mabrouk, N.1    Sankoff, D.2
  • 8
    • 0037623969 scopus 로고    scopus 로고
    • The reconstruction of doubled genomes
    • El-Mabrouk, N., and Sankoff, D. 2003. The reconstruction of doubled genomes. SIAM J. Comput. 32, 754-792.
    • (2003) SIAM J. Comput , vol.32 , pp. 754-792
    • El-Mabrouk, N.1    Sankoff, D.2
  • 9
  • 10
    • 4344683006 scopus 로고    scopus 로고
    • Whole-genome duplications in South American desert rodents (Octodontidae)
    • Gallardo, M.H., Kausel, G., Jiminez, A. et al. 2004. Whole-genome duplications in South American desert rodents (Octodontidae). Biol. J. Linnean Soc. 82, 443-451.
    • (2004) Biol. J. Linnean Soc , vol.82 , pp. 443-451
    • Gallardo, M.H.1    Kausel, G.2    Jiminez, A.3
  • 11
    • 10244239321 scopus 로고    scopus 로고
    • Life with 6000 genes
    • Goffeau, A., Barrell, B.G., Bussey, H., et al. 1996. Life with 6000 genes. Science 275, 1051-1052.
    • (1996) Science , vol.275 , pp. 1051-1052
    • Goffeau, A.1    Barrell, B.G.2    Bussey, H.3
  • 12
    • 0032957497 scopus 로고    scopus 로고
    • Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history
    • Hughes, A.L. 1999. Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history. J. Mol. Evol. 48, 565-576.
    • (1999) J. Mol. Evol , vol.48 , pp. 565-576
    • Hughes, A.L.1
  • 13
    • 0037540048 scopus 로고    scopus 로고
    • Phylogenetic relationships among yeasts of the Saccharomyces complex determined from multigene sequence analyses
    • Kurtzman, C.P., and Robnett, C.J. 2003. Phylogenetic relationships among yeasts of the Saccharomyces complex determined from multigene sequence analyses. FEMS Yeast Res. 3, 417-432.
    • (2003) FEMS Yeast Res , vol.3 , pp. 417-432
    • Kurtzman, C.P.1    Robnett, C.J.2
  • 14
    • 0036613237 scopus 로고    scopus 로고
    • Extensive genomic duplication during early chordate evolution
    • McLysaght, A., Hokamp, K., and Wolfe, K.H. 2002. Extensive genomic duplication during early chordate evolution. Nat. Genet. 31, 200-204.
    • (2002) Nat. Genet , vol.31 , pp. 200-204
    • McLysaght, A.1    Hokamp, K.2    Wolfe, K.H.3
  • 15
    • 0014237181 scopus 로고
    • Evolution from fish to mammals by gene duplication
    • Ohno, S., Wolf, U., and Atkin, N.B. 1968. Evolution from fish to mammals by gene duplication. Hereditas 59, 169-187.
    • (1968) Hereditas , vol.59 , pp. 169-187
    • Ohno, S.1    Wolf, U.2    Atkin, N.B.3
  • 16
    • 18244431887 scopus 로고    scopus 로고
    • Vertebrate genome evolution and the zebrafish gene map
    • Postlethwait, J.H., Yan, Y.L., Gates, M.A., et al. 1998. Vertebrate genome evolution and the zebrafish gene map. Nat. Genet. 18, 345-349.
    • (1998) Nat. Genet , vol.18 , pp. 345-349
    • Postlethwait, J.H.1    Yan, Y.L.2    Gates, M.A.3
  • 17
    • 34547844124 scopus 로고    scopus 로고
    • Polyploids, genome halving and phylogeny
    • Sankoff, D., Zheng, C., and Zhu, Q. 2007. Polyploids, genome halving and phylogeny. Bioinformatics 23, i433-i439.
    • (2007) Bioinformatics , vol.23
    • Sankoff, D.1    Zheng, C.2    Zhu, Q.3
  • 18
    • 84959066123 scopus 로고    scopus 로고
    • Finding an optimal inversion median: Experimental results
    • Siepel, A., and Moret, B.M.E. 2001. Finding an optimal inversion median: experimental results. Lect. Notes Comput. Sci. 2149, 189-203.
    • (2001) Lect. Notes Comput. Sci , vol.2149 , pp. 189-203
    • Siepel, A.1    Moret, B.M.E.2
  • 19
    • 0030947344 scopus 로고    scopus 로고
    • Molecular evidence for an ancient duplication of the entire yeast genome
    • Wolfe, K.H., and Shields, D.C. 1997. Molecular evidence for an ancient duplication of the entire yeast genome. Nature 387, 708-713.
    • (1997) Nature , vol.387 , pp. 708-713
    • Wolfe, K.H.1    Shields, D.C.2
  • 20
    • 0031014944 scopus 로고    scopus 로고
    • Differential regulation of neurogenesis by the two Xenopus GATA-1 genes
    • Xu, R.H., Kim, J., Taira, M., et al. 1997. Differential regulation of neurogenesis by the two Xenopus GATA-1 genes. Mol. Cell. Biol. 17, 436-443.
    • (1997) Mol. Cell. Biol , vol.17 , pp. 436-443
    • Xu, R.H.1    Kim, J.2    Taira, M.3
  • 21
    • 34547846887 scopus 로고    scopus 로고
    • Genome halving with an outgroup
    • Zheng, C., Zhu, Q., and Sankoff, D. 2006. Genome halving with an outgroup. Evol. Bioinform. 2, 319-326.
    • (2006) Evol. Bioinform , vol.2 , pp. 319-326
    • Zheng, C.1    Zhu, Q.2    Sankoff, D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.