Active-site mapping of a Populus xyloglucan endo-transglycosylase with a library of xylogluco-oligosaccharides

Journal of Biological Chemistry

Volumn 283, Issue 32, 2008, Pages 21853-21863

  Saura Valls, Marc ^a   Fauré, Régis ^b,d   Brumer, Harry ^c   Teeri, Tuula T ^c   Cottaz, Sylvain ^b   Driguez, Hugues ^b   Planas, Antoni ^a  

^a INSTITUT QUÍMIC DE SARRIÀ   (Spain)

^b CNRS   (France)

^c ALBANOVA UNIVERSITY CENTER   (Sweden)

^d INSA   (France)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING ENERGY; BINDING SITES; CELLULOSE DERIVATIVES; CONFORMAL MAPPING; ENZYME INHIBITION; ENZYMES; GENE TRANSFER; OLIGOSACCHARIDES; PLANT CELL CULTURE; POLYMERS; SULFUR COMPOUNDS; TURBULENT FLOW;

BINDING CLEFTS; CATALYTIC RESIDUES; CELL WALLS; COMPETITIVE INHIBITIONS; DONOR BINDINGS; DONOR SUBSTRATES; ENZYME BINDINGS; HEPTASACCHARIDE; HYBRID SUBSTRATES; PLANT CELL WALLS; POLYMERIZATION REACTIONS; SUBSITE MAPPINGS; SUBSTRATE SPECIFICITIES; TRANSGLYCOSYLASES; TRANSGLYCOSYLATION; TRANSITION STATE STABILIZATIONS; XYLOGLUCAN;

SUBSTRATES;

CELLULOSE; GLUCAN; GLYCOSIDASE; OLIGOSACCHARIDE; POLYMER; UNCLASSIFIED DRUG; XYLOGLUCAN; XYLOGLUCAN ENDO TRANSGLYCOSYLASE; 8 AMINO 1,3,6 NAPHTHALENETRISULFONIC ACID; 8-AMINO-1,3,6-NAPHTHALENETRISULFONIC ACID; GLYCOSYLTRANSFERASE; NAPHTHALENE DERIVATIVE; XYLOGLUCAN ENDOTRANSGLYCOSYLASE;

ARTICLE; ASPEN; BINDING AFFINITY; CAPILLARY ELECTROPHORESIS; CATALYSIS; CELL WALL; COMPETITIVE INHIBITION; ENZYME ACTIVE SITE; ENZYME GLYCOSYLATION; ENZYME KINETICS; ENZYME SPECIFICITY; ENZYME SUBSTRATE; PLANT; PRIORITY JOURNAL; BINDING SITE; ENZYMOLOGY; KINETICS; METABOLISM; MOLECULAR LIBRARY; TIME;

CELL WALLS; CELLULOSE DERIVATIVES; ENZYMES; GENETIC ENGINEERING; INHIBITION; OLIGOSACCHARIDES; POLYMERS; SULFUR COMPOUNDS; TURBULENT FLOW;

POPULUS;

BINDING SITES; ELECTROPHORESIS, CAPILLARY; GLYCOSYLTRANSFERASES; KINETICS; NAPHTHALENES; OLIGOSACCHARIDES; POPULUS; SMALL MOLECULE LIBRARIES; TIME FACTORS;

EID: 52049124583     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M803058200     Document Type: Article

References (48)

1. Carpita, N., and McCann, M. (2000) in Biochemistry & Molecular Biology of Plants (Buchanan, B., Gruissem, W., and Jones, R., eds) pp. 52-108, American Society of Plant Physiologists, Rockville, MD
2. Buckeridge, M. S., dos Santos, H. P., and Tine, M. A. (2000) Plant Physiol. Biochem. 38, 141-156
3. Reiter, W. D. (2002) Curr. Opin. Plant Biol. 5, 536-542
4. Pauly, M., Andersen, L. N., Kauppinen, S., Kofod, L. V., York, W. S., Albersheim, P., and Darvill, A. (1999) Glycobiology 9, 93-100
5. Cosgrove, D. J. (2001) Plant Physiol. 125, 131-134
6. Cosgrove, D. J. (2005) Nat. Rev. Mol. Cell Biol. 6, 850-861
7. Vincken, J. P., York, W. S., Beldman, G., and Voragen, A. G. J. (1997) Plant Physiol. 114, 9-13
8. Gilbert, H. J., Stålbrand, H., and Brumer, H. (2008) Curr. Opin. Plant Biol. 11, 338-348
9. Fry, S. C., York, W. S., Albersheim, P., Darvill, A., Hayashi, T., Joseleau, J. P., Kato, Y., Lorences, E. P., Maclachlan, G. A., McNeil, M., Mort, A. J., Reid, J. S. G., Seitz, H. U., Selvendran, R. R., Voragen, A. G. J., and White, A. R. (1993) Physiol. Plant. 89, 1-3
10. Nishitani, K., and Tominaga, R. (1992) J. Biol. Chem. 267, 21058-21064
11. Fry, S. C., Smith, R. C., Renwick, K. F., Martin, D. J., Hodge, S. K., and Matthews, K. J. (1992) Biochem. J. 282, 821-828
12. Farkaš, V., Sulová, Z., Stratilova, E., Hanna, R., and Maclachlan, G. (1992) Arch. Biochem. Biophys. 298, 365-370
13. Thompson, J. E., Smith, R. C., and Fry, S. C. (1997) Biochem. J. 327, 699-708
14. Nishitani, K. (1998) J. Plant Res. 111, 159-166
15. Rose, J. K., Braam, J., Fry, S. C., and Nishitani, K. (2002) Plant Cell Physiol. 43, 1421-1435
16. Campbell, P., and Braam, J. (1999) Trends Plant Sci. 4, 361-366
17. Baumann, M. J., Eklöf, J. M., Michel, G., Kallas, A. M., Teeri, T. T., Czjzek, M., and Brumer, H., III (2007) Plant Cell 19, 1947-1963
18. Henrissat, B., and Davies, G. J. (1997) Curr. Opin. Struct. Biol. 7, 637-644
19. Coutinho, P. M., and Henrissat, B. (1999) in Recent Advances in Carbohydrate Bioengineering (Gilbert, H. J., Davies, G. J., Henrissat, B., and Svensson, B., eds) pp. 3-12, Royal Society of Chemistry, Cambridge
20. Sinnott, M. L. (1990) Chem. Rev. 90, 1171-1202
21. Planas, A. (2000) Biochim. Biophys. Acta 1543, 361-382
22. Sulová, Z., Takacova, M., Steele, N. M., Fry, S. C., and Farkaš, V. (1998) Biochem. J. 330, 1475-1480
23. Piens, K., Fauré, R., Sundqvist, G., Baumann, M. J, Saura-Valls, M., Teeri, T. T., Planas, A., Driguez, H., and Brumer, H. (2008) J. Biol. Chem. 283, 21864-21872
24. Nishitani, K. (1992) Plant Cell Physiol. 33, 1159-1164
25. Maclachlan, G., and Brady, C. (1994) Plant Physiol. 105, 965-974
26. Fry, S. C. (1997) Plant J. 11, 1141-1150
27. Farkaš, V., Ait-Mohand, F., and Stratilova, E. (2005) Plant Physiol. Biochem. 43, 431-435
28. Fanutti, C., Gidley, M. J., and Reid, J. S. G. (1993) Plant J. 3, 691-700
29. Fanutti, C., Gidley, M. J., and Reid, J. S. G. (1996) Planta 200, 221-228
30. Johansson, P., Brumer, H., III, Baumann, M. J., Kallas, A. M., Henriksson, H., Denman, S. E., Teeri, T. T., and Jones, T. A. (2004) Plant Cell 16, 874-886
31. Piens, K., Henriksson, A. M., Gullfot, F., Lopez, M., Fauré, R., Ibatullin, F. M., Teeri, T. T., Driguez, H., and Brumer, H. (2007) Org. Biomol. Chem. 5, 3971-3978
32. Juncosa, M., Pons, J., Dot, T., Querol, E., and Planas, A. (1994) J. Biol. Chem. 269, 14530-14535
33. Malet, C., and Planas, A. (1998) FEBS Lett. 440, 208-212
34. Fauré, R., Saura-Valls, M., Brumer, H., III, Planas, A., Cottaz, S., and Driguez, H. (2006) J. Org. Chem. 71, 5151-5161
35. Saura-Valls, M., Fauré, R., Ragás, S., Piens, K., Brumer, H., Teeri, T. T., Cottaz, S., Driguez, H., and Planas, A. (2006) Biochem. J. 395, 99-106
36. Kallas, A. M., Piens, K., Denman, S., Henriksson, H., Fäldt, E. J., Johansson, P., Brumer, H., III, and Teeri, T. T. (2005) Biochem. J. 390, 105-113
37. Allen, J. D. (1980) Methods Enzymol. 64, 248-277
38. Hiromi, K. (1970) Biochem. Biophys. Res. Commun. 40, 1-14
39. Malet, C., and Planas, A. (1997) Biochemistry 36, 13838-13848
40. Fauré, R., Cavalier, D., Keegstra, K., Cottaz, S., and Driguez, H. (2008) Eur. J. Org. Chem. 26, 4313-4319
41. Fairweather, J. K., Faijes, M., Driguez, H., and Planas, A. (2002) ChemBioChem. 3, 866-873
42. Lorences, E. P., and Fry, S. C. (1993) Physiol. Plant. 88, 105-112
43. Mohand, F. A., and Farkaš, V. (2006) Carbohydr. Res. 341, 577-581
44. Hrmova, M., Farkaš, V., Lahnstein, J., and Fincher, G. B. (2007) J. Biol. Chem. 282, 12951-12962
45. Alkazaz, M., Desseaux, V., Marchismouren, G., Payan, F., Forest, E., and Santimone, M. (1996) Eur. J. Biochem. 241, 787-796
46. Takeda, T., Miller, J. G., and Fry, S. C. (2008) Planta 227, 893-905
47. Tabuchi, A., Kamisaka, S., and Hoson, T. (1997) Plant Cell Physiol. 38, 653-658
48. Baran, R., Sulová, Z., Stratilova, E., and Farkaš, V. (2000) Gen. Physiol. Biophys. 19, 427-440