-
1
-
-
0024358426
-
Mapping the transition state and pathway of protein folding by protein engineering
-
Matouschek A, Kellis JT Jr, Serrano L, Fersht AR, Mapping the transition state and pathway of protein folding by protein engineering, Nature 340(6229): 122-126, 1989.
-
(1989)
Nature
, vol.340
, Issue.6229
, pp. 122-126
-
-
Matouschek, A.1
Kellis Jr, J.T.2
Serrano, L.3
Fersht, A.R.4
-
2
-
-
0025698613
-
Transient folding intermediates characterized by protein engineering
-
Matouschek A, Kellis JT Jr, Serrano L, Bycroft M, Fersht AR, Transient folding intermediates characterized by protein engineering, Nature 346(6283):440-445, 1990.
-
(1990)
Nature
, vol.346
, Issue.6283
, pp. 440-445
-
-
Matouschek, A.1
Kellis Jr, J.T.2
Serrano, L.3
Bycroft, M.4
Fersht, A.R.5
-
3
-
-
0037818986
-
The proteins of the mammalian epidermis
-
Rudall KM, The proteins of the mammalian epidermis, Adv Protein Chem 7:253-290, 1952.
-
(1952)
Adv Protein Chem
, vol.7
, pp. 253-290
-
-
Rudall, K.M.1
-
4
-
-
20444440728
-
Structure of the cross-beta spine of amyloid-like fibrils
-
Nelson R, Sawaya MR, Balbirnie M, Madsen AO, Riekel C, Grothe R, Eisenberg D, Structure of the cross-beta spine of amyloid-like fibrils, Nature 435(7043):747-749, 2005.
-
(2005)
Nature
, vol.435
, Issue.7043
, pp. 747-749
-
-
Nelson, R.1
Sawaya, M.R.2
Balbirnie, M.3
Madsen, A.O.4
Riekel, C.5
Grothe, R.6
Eisenberg, D.7
-
5
-
-
0242668337
-
Common structure of soluble amyloid oligomers implies common mechanism of pathogenesis
-
Kayed R, Head E, Thompson JL, McIntire TM, Milton SC, Cotman CW, Glabe CG, Common structure of soluble amyloid oligomers implies common mechanism of pathogenesis, Science 300(5641):486-489, 2003.
-
(2003)
Science
, vol.300
, Issue.5641
, pp. 486-489
-
-
Kayed, R.1
Head, E.2
Thompson, J.L.3
McIntire, T.M.4
Milton, S.C.5
Cotman, C.W.6
Glabe, C.G.7
-
6
-
-
13144259646
-
Amyloid fibril formation by an SH3 domain
-
Guijarro JI, Sunde M, Jones JA, Campbell ID, Dobson CM, Amyloid fibril formation by an SH3 domain, Proc Natl Acad Sci USA 95 (8):4224-4228, 1998.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, Issue.8
, pp. 4224-4228
-
-
Guijarro, J.I.1
Sunde, M.2
Jones, J.A.3
Campbell, I.D.4
Dobson, C.M.5
-
7
-
-
0033616575
-
Designing conditions for in vitro formation of amyloid protofilaments and fibrils
-
Chiti F,Webster P, Taddei N, Clark A, Stefani M, Ramponi G, Dobson CM, Designing conditions for in vitro formation of amyloid protofilaments and fibrils, Proc Natl Acad Sci USA 96 (7):3590-3594, 1999.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, Issue.7
, pp. 3590-3594
-
-
Chiti, F.1
Webster, P.2
Taddei, N.3
Clark, A.4
Stefani, M.5
Ramponi, G.6
Dobson, C.M.7
-
8
-
-
0035826234
-
Amyloid fibrils from muscle myoglobin
-
FandrichM, Fletcher MA, Dobson CM, Amyloid fibrils from muscle myoglobin, Nature 410(6825):165-166, 2001.
-
(2001)
Nature
, vol.410
, Issue.6825
, pp. 165-166
-
-
Fandrich, M.1
Fletcher, M.A.2
Dobson, C.M.3
-
9
-
-
0028958601
-
Characterizing transition states in protein folding: An essential step in the puzzle
-
Fersht AR, Characterizing transition states in protein folding: An essential step in the puzzle, Curr Opin Struct Biol 5 (1):79-84, 1995.
-
(1995)
Curr Opin Struct Biol
, vol.5
, Issue.1
, pp. 79-84
-
-
Fersht, A.R.1
-
10
-
-
0031043161
-
Nucleation mechanisms in protein folding
-
Fersht AR, Nucleation mechanisms in protein folding, Curr Opin Struct Biol 7(1):3-9, 1997.
-
(1997)
Curr Opin Struct Biol
, vol.7
, Issue.1
, pp. 3-9
-
-
Fersht, A.R.1
-
11
-
-
0029670994
-
Conserved residues and the mechanism of protein folding
-
Shakhnovich E, Abkevich V, Ptitsyn O, Conserved residues and the mechanism of protein folding, Nature 379(6560):96-98, 1996.
-
(1996)
Nature
, vol.379
, Issue.6560
, pp. 96-98
-
-
Shakhnovich, E.1
Abkevich, V.2
Ptitsyn, O.3
-
12
-
-
0031867090
-
A strategy for detecting the conservation of folding-nucleus residues in protein superfamilies
-
Michnick SW, Shakhnovich E, A strategy for detecting the conservation of folding-nucleus residues in protein superfamilies, Fold Des 3 (4):239-251, 1998.
-
(1998)
Fold Des
, vol.3
, Issue.4
, pp. 239-251
-
-
Michnick, S.W.1
Shakhnovich, E.2
-
13
-
-
0029981188
-
Structure of the transition state for folding of a protein derived from experiment and simulation
-
Daggett V, Li A, Itzhaki LS, Otzen DE, Fersht AR, Structure of the transition state for folding of a protein derived from experiment and simulation, J Mol Biol 257(2):430-440, 1996.
-
(1996)
J Mol Biol
, vol.257
, Issue.2
, pp. 430-440
-
-
Daggett, V.1
Li, A.2
Itzhaki, L.S.3
Otzen, D.E.4
Fersht, A.R.5
-
14
-
-
0029124153
-
Acid and thermal denaturation of barnase investigated by molecular dynamics simulations
-
Caflisch A, Karplus M, Acid and thermal denaturation of barnase investigated by molecular dynamics simulations, J Mol Biol 252 (5):672-708, 1995.
-
(1995)
J Mol Biol
, vol.252
, Issue.5
, pp. 672-708
-
-
Caflisch, A.1
Karplus, M.2
-
15
-
-
0037456298
-
The complete folding pathway of a protein from nanoseconds to microseconds
-
Mayor U, Guydosh NR, Johnson CM, Grossman JG, Sato S, Jas GS, Freund SMV, Alonso DOV, Daggett V, Fersht AR, The complete folding pathway of a protein from nanoseconds to microseconds, Nature 421 (6925):863-867, 2003.
-
(2003)
Nature
, vol.421
, Issue.6925
, pp. 863-867
-
-
Mayor, U.1
Guydosh, N.R.2
Johnson, C.M.3
Grossman, J.G.4
Sato, S.5
Jas, G.S.6
Freund, S.M.V.7
Alonso, D.O.V.8
Daggett, V.9
Fersht, A.R.10
-
16
-
-
0033613131
-
A theoretical search for folding/ unfolding nuclei in three-dimensional protein structures
-
Galzitskaya OV, Finkelstein AV, A theoretical search for folding/ unfolding nuclei in three-dimensional protein structures, Proc Natl Acad Sci USA 96(20):11299-11304, 1999.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, Issue.20
, pp. 11299-11304
-
-
Galzitskaya, O.V.1
Finkelstein, A.V.2
-
17
-
-
0033613255
-
Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures
-
Alm E, Baker D, Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures, Proc Natl Acad Sci USA 96(20):11305-11310, 1999.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, Issue.20
, pp. 11305-11310
-
-
Alm, E.1
Baker, D.2
-
18
-
-
0033613165
-
A simple model for calculating the kinetics of protein folding from three-dimensional structures
-
Munoz V, Eaton WA, A simple model for calculating the kinetics of protein folding from three-dimensional structures, Proc Natl Acad Sci USA 96(20):11311-11316, 1999.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, Issue.20
, pp. 11311-11316
-
-
Munoz, V.1
Eaton, W.A.2
-
19
-
-
33644829060
-
On the prediction of folding nuclei in globular proteins
-
Garbuzynskiy SO, Finkelstein AV, Galzitskaya OV, On the prediction of folding nuclei in globular proteins, Mol Biol (Moscow) 39 (6):906-914, 2005.
-
(2005)
Mol Biol (Moscow)
, vol.39
, Issue.6
, pp. 906-914
-
-
Garbuzynskiy, S.O.1
Finkelstein, A.V.2
Galzitskaya, O.V.3
-
20
-
-
0036295640
-
Sensitivity of folding pathway to the details of amino-acid sequence
-
Galzitskaya OV, Sensitivity of folding pathway to the details of amino-acid sequence, Mol Biol (Mosk) 36(3):386-390, 2002.
-
(2002)
Mol Biol (Mosk)
, vol.36
, Issue.3
, pp. 386-390
-
-
Galzitskaya, O.V.1
-
21
-
-
14644435825
-
Intrinsically unstructured proteins and their functions
-
Dyson HJ, Wright PE, Intrinsically unstructured proteins and their functions, Nat Rev Mol Cell Biol 6(3):197-208, 2005.
-
(2005)
Nat Rev Mol Cell Biol
, vol.6
, Issue.3
, pp. 197-208
-
-
Dyson, H.J.1
Wright, P.E.2
-
22
-
-
0345304461
-
Origin of unusual φ-values in protein folding: Evidence against specific nucleation sites
-
Sánchez IE, Kiefhaber T, Origin of unusual φ-values in protein folding: Evidence against specific nucleation sites, J Mol Biol 334(5):1077-1085, 2003.
-
(2003)
J Mol Biol
, vol.334
, Issue.5
, pp. 1077-1085
-
-
Sánchez, I.E.1
Kiefhaber, T.2
-
23
-
-
33748349224
-
The role of hydrophobic interactions in initiation and propagation of protein folding
-
Dyson HJ, Wright PE, Scheraga HA, The role of hydrophobic interactions in initiation and propagation of protein folding, Proc Natl Acad Sci USA 103(35):13057-13061, 2006.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.35
, pp. 13057-13061
-
-
Dyson, H.J.1
Wright, P.E.2
Scheraga, H.A.3
-
24
-
-
33748314477
-
High polar content of long buried blocks of sequence in protein domains suggests selection against amyloidogenic non-polar sequences
-
Patki AU, Hausrath AC, Cordes MH, High polar content of long buried blocks of sequence in protein domains suggests selection against amyloidogenic non-polar sequences, J Mol Biol 362 (4):800-809, 2006.
-
(2006)
J Mol Biol
, vol.362
, Issue.4
, pp. 800-809
-
-
Patki, A.U.1
Hausrath, A.C.2
Cordes, M.H.3
-
25
-
-
33845990277
-
Prediction of amyloidogenic and disordered regions in protein chains
-
Galzitskaya OV, Garbuzynskiy SO, Lobanov MY, Prediction of amyloidogenic and disordered regions in protein chains, PLoS Comput Biol 2 (12):e177, 2006.
-
(2006)
PLoS Comput Biol
, vol.2
, Issue.12
-
-
Galzitskaya, O.V.1
Garbuzynskiy, S.O.2
Lobanov, M.Y.3
-
26
-
-
33747845657
-
Entropic criteria for protein folding derived from recurrences: Six residues patch as the basic protein word
-
Zbilut JP, Chua GH, Krishnan A, Bossa C, Colafranceschi M, Giuliani A, Entropic criteria for protein folding derived from recurrences: Six residues patch as the basic protein word, FEBS Lett 580 (20):4861-4864, 2006.
-
(2006)
FEBS Lett
, vol.580
, Issue.20
, pp. 4861-4864
-
-
Zbilut, J.P.1
Chua, G.H.2
Krishnan, A.3
Bossa, C.4
Colafranceschi, M.5
Giuliani, A.6
-
28
-
-
33749871677
-
A search for amyloidogenic regions in protein chains
-
Galzitskaya OV, Garbuzynskiy SO, Lobanov MY, A search for amyloidogenic regions in protein chains, Mol Biol (Moscow) 40(5):821-828, 2006.
-
(2006)
Mol Biol (Moscow)
, vol.40
, Issue.5
, pp. 821-828
-
-
Galzitskaya, O.V.1
Garbuzynskiy, S.O.2
Lobanov, M.Y.3
-
29
-
-
33745712610
-
-
Galzitskaya OV, Garbuzynskiy SO, Lobanov MY, is it possible to predict amyloidogenic regions from sequence alone?, J Bioinform Comput Biol 4(2):373-388, 2006.
-
Galzitskaya OV, Garbuzynskiy SO, Lobanov MY, is it possible to predict amyloidogenic regions from sequence alone?, J Bioinform Comput Biol 4(2):373-388, 2006.
-
-
-
-
31
-
-
0024293204
-
Conformation of peptide fragments of proteins in aqueous solution: Implications for initiation of protein folding
-
Wright PE, Dyson HJ, Lerner RA, Conformation of peptide fragments of proteins in aqueous solution: Implications for initiation of protein folding, Biochemistry 27(19):7167-7175, 1988.
-
(1988)
Biochemistry
, vol.27
, Issue.19
, pp. 7167-7175
-
-
Wright, P.E.1
Dyson, H.J.2
Lerner, R.A.3
-
32
-
-
0025370815
-
Dominant forces on protein folding
-
Dill KA, Dominant forces on protein folding, Biochemistry 29 (31):7133-7155, 1990.
-
(1990)
Biochemistry
, vol.29
, Issue.31
, pp. 7133-7155
-
-
Dill, K.A.1
-
33
-
-
0242321015
-
Role of the B helix in early folding events in apomyoglobin: Evidence from site-directed mutagenesis for native-like long range interactions
-
Nishimura C, Wright PE, Dyson HJ, Role of the B helix in early folding events in apomyoglobin: Evidence from site-directed mutagenesis for native-like long range interactions, J Mol Biol 334 (2):293-307, 2003.
-
(2003)
J Mol Biol
, vol.334
, Issue.2
, pp. 293-307
-
-
Nishimura, C.1
Wright, P.E.2
Dyson, H.J.3
-
34
-
-
22444443996
-
Sequence determinants of a protein folding pathway
-
Nishimura C, Lietzow MA, Dyson HJ, Wright PE, Sequence determinants of a protein folding pathway, J Mol Biol 351(2):383-392, 2005.
-
(2005)
J Mol Biol
, vol.351
, Issue.2
, pp. 383-392
-
-
Nishimura, C.1
Lietzow, M.A.2
Dyson, H.J.3
Wright, P.E.4
-
35
-
-
33947091990
-
A method for predicting nucleation sites for protein folding based on hydrophobic contacts
-
Matheson RR Jr, Scheraga HA, A method for predicting nucleation sites for protein folding based on hydrophobic contacts, Macromolecules 11:819-829, 1978.
-
(1978)
Macromolecules
, vol.11
, pp. 819-829
-
-
Matheson Jr, R.R.1
Scheraga, H.A.2
-
36
-
-
0019052221
-
Hydrophobic basis of packing in globular proteins
-
Rose GD, Roy S, Hydrophobic basis of packing in globular proteins, Proc Natl Acad Sci USA 77(8):4643-4647, 1980.
-
(1980)
Proc Natl Acad Sci USA
, vol.77
, Issue.8
, pp. 4643-4647
-
-
Rose, G.D.1
Roy, S.2
-
37
-
-
0017474001
-
Hypothesis about the mechanism of protein folding
-
Tanaka S, Scheraga HA, Hypothesis about the mechanism of protein folding, Macromolecules 10(2):291-304, 1977.
-
(1977)
Macromolecules
, vol.10
, Issue.2
, pp. 291-304
-
-
Tanaka, S.1
Scheraga, H.A.2
-
38
-
-
0018589605
-
A possible folding pathway of bovine pancreatic RNase
-
Nemethy G, Scheraga HA, A possible folding pathway of bovine pancreatic RNase, Proc Natl Acad Sci USA 76(12):6050-6054, 1979.
-
(1979)
Proc Natl Acad Sci USA
, vol.76
, Issue.12
, pp. 6050-6054
-
-
Nemethy, G.1
Scheraga, H.A.2
-
39
-
-
0022092307
-
-
Gerritsen M, Chou KC, Nemethy G, Scheraga HA, Energetics of multihelix interactions in protein folding: Application to myoglobin, Biopolymers 24(7):1271-1291, 1985. Erraturn 24:2177, 2005.
-
Gerritsen M, Chou KC, Nemethy G, Scheraga HA, Energetics of multihelix interactions in protein folding: Application to myoglobin, Biopolymers 24(7):1271-1291, 1985. Erraturn 24:2177, 2005.
-
-
-
-
40
-
-
0025186451
-
Structural characterization of a partly folded apomyoglobin intermediate
-
Hughson FM, Wright PE, Baldwin RL, Structural characterization of a partly folded apomyoglobin intermediate, Science 249 (4976):1544-1548, 1990.
-
(1990)
Science
, vol.249
, Issue.4976
, pp. 1544-1548
-
-
Hughson, F.M.1
Wright, P.E.2
Baldwin, R.L.3
-
41
-
-
0027749370
-
Formation of a molten globule intermediate early in the kinetic folding pathway of apomyoglobin
-
Jennings PA, Wright PE, Formation of a molten globule intermediate early in the kinetic folding pathway of apomyoglobin, Science 262 (5135):892-896, 1993.
-
(1993)
Science
, vol.262
, Issue.5135
, pp. 892-896
-
-
Jennings, P.A.1
Wright, P.E.2
|