Identification of differentially expressed genes in soybean seeds differing in oil content

Plant Science

Volumn 175, Issue 5, 2008, Pages 663-673

  Wei, Wen Hui ^a   Chen, Bo ^a   Yan, Xiao Hong ^a   Wang, Li Jun ^a   Zhang, Hui Fang ^a   Cheng, Jin Peng ^a   Zhou, Xin An ^a   Sha, Ai Hua ^a   Shen, Hong ^b  

^a INSTITUTE OF PLANT PROTECTION   (China)

^b SOUTH CHINA AGRICULTURAL UNIVERSITY   (China)

Author keywords

Differentially expressed gene; Oil synthesis; Seed development; Suppression subtractive hybridization

Indexed keywords

GLYCINE MAX;

EID: 51649083954     PISSN: 01689452     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plantsci.2008.06.018     Document Type: Article

References (50)

1. Zhou S., Zhang D., Luan H., Yu F., Xin X., and Hu G. Primary study on protein and lipid accumulation in high oil content soybean varieties. Chin. J. Oil Crop Sci. 28 (2006) 214-216
2. Clough R.C., Matthis A.L., Barnum S.R., and Jaworski J.G. Purification and characterization of 3-ketoacyl-acyl carrier protein synthase III from spinach. A condensing enzyme utilizing acetyl-coenzyme A to initiate fatty acid synthesis. J. Biol. Chem. 267 (1992) 20992-20998
3. Jaworski J.G., Post-Beittenmiller D., and Ohlrogge J.B. Acetyl-acyl carrier protein is not a major intermediate in fatty acid biosynthesis in spinach. Eur. J. Biochem. 213 (1993) 981-987
4. Jaworski J.G., Clough R.C., and Barnum S.R. A cerulenin insensitive short chain 3-ketoacyl-acyl carrier protein synthase in Spinacia oleracea leaves. Plant Physiol. 90 (1989) 41-44
5. Dehesh K., Tai H., and Edwards P. Overexpression of 3-ketoacyl-acyl-carrier protein synthase IIIs in plants reduced the rate of lipid synthesis. Plant Physiol. 125 (2001) 1103-1114
6. Roesler K., Shintani D., Savage L., Boddupalli S., and Ohlrogge J. Targeting of the Arabidopsis hormomeric acetyl-coenzyme A carboxylase to plastids of rapeseeds. Plant Physiol. 113 (1997) 75-81
7. Van de Loo F.J., Turner S., and Somerville C. Expressed sequence tags from developing caster seeds. Plant Physiol. 108 (1995) 1441-1150
8. Shanklin J., and Somerville C.R. Stearoyl-ACP desaturase from higher plants is structurally unrelated to the animal homolog. Proc. Natl. Acad. Sci. U.S.A. 88 (1991) 2510-2514
9. Cahoon E.B., Carlson T.J., Ripp K.G., Schweiger B.J., Cook G.A., Hall S.E., and Kinney A.J. Biosynthetic origin of conjugated double bonds: production of fatty acid components of high-value drying oils in transgenic soybean embryos. Proc. Natl. Acad. Sci. U.S.A. 96 (1999) 12935-12940
10. Wang H.W., Zhang B., Hao Y.J., Huang J., Tian A.G., Liao Y., Zhang J.S., and Chen S.Y. The soybean Dof-type transcription factor genes, GmDof4 and GmDof11, enhance lipid content in the seeds of transgenic Arabidopsis plants. Plant J. 52 (2007) 716-729
11. Kang F., and Rawsthorne S. Metabolism of glucose 6-phosphate and utilization of multiple metabolites for oil synthesis by plastids from developing oils seed rape embryos. Planta 199 (1996) 321-327
12. Schwender J., and Ohlrogge J. Probing in vivo metabolism by stable isotope labeling of storage lipids and proteins in developing Brassica napus embryos. Plant Physiol. 130 (2002) 347-361
13. Murphy D.J. The biogenesis and functions of lipid bodies in animals, plants and microorganisms. Plant J. 13 (2001) 1-16
14. Hsieh K., and Huang A.H.C. Endoplasmic reticulum, oleosins, and oils in seeds and tapetum cells. Plant Physiol. 136 (2004) 3427-3434
15. Li R.J., Wang H.Z., Mao H., Lu Y.T., and Hua W. Identification of differentially expressed genes in seeds of two near-isogenic Brassica napus lines with different oil content. Planta 224 (2006) 952-962
16. Voelker T.A., Hayes T.R., Cranmer A.M., Turner J.C., and Davies H.M. Genetic engineering of a quantitative trait-metabolic and genetic parameters influencing the accumulation of laurate in rapeseed. Plant J. 9 (1996) 229-241
17. Eccleston V.S., and Ohlrogge J.B. Expression of lauroyl-acyl carrier protein thioesterase in Brassica napus seeds induces pathways for both fatty acid oxidation and biosynthesis and implies a set point for triacylglycerol accumulation. Plant Cell 10 (1998) 613-622
18. Upton C., and Buckley J.T. A new family of lipolytic enzymes. Trends Biochem. Sci. 20 (1995) 178-179
19. Akoh C.C., Lee G.C., and Liaw Y.C. GDSL family of serine esterases/lipases. Prog. Lipid Res. 43 (2004) 534-552
20. Hildebrand D.F., Hamilton-Kemp T.R., and Legg C.S. Plant lipoxygenases: occurrences, properties and possible functions. Curr. Top Plant Biochem. Physiol. 7 (1988) 201-219
21. Bell E., and Mulle J.E. Characterization of an Arabidopsis thaliana lipoxygenase gene responsive to methyl jasmonate and wounding. Plant Physiol. 103 (1993) 1133-1137
22. Croft K.P.C., Jutter F., and Slusarenko A.J. Volatile products of the lipoxygenase pathway evolved from Phaseolus vulgaris (L.) leaves inoculated with Pseudomonas syringae pv. phaseolicola. Plant Physiol. 101 (1993) 13-24
23. Eiben H.G., and Slusarenko A.J. Complex spatial and temporal expression of lipoxygenase genes during Phaseolus vulgaris (L) development. Plant J. 5 (1994) 123-135
24. Creelman R.A., Bell E., and Mullet J. Involvement of a lipoxygenase-like enzyme in abscisic acid biosynthesis. Plant Physiol. 99 (1992) 1258-1265
25. Tranbarger T.J., Franceschi V.R., and Hildebrand D.F. The Soybean 94-kilodalton vegetative storage protein is a lipoxygenase that is localized in paraveinal mesophyll cell vacuoles. Plant Cell 3 (1991) 973-987
26. Minor W., Steczko J., and Bolin J.T. Crystallographic determination of the active site iron and its ligands in soybean lipoxygenase. Biochemistry 32 (1993) 6320-6323
27. Jensen A.B., Pocal E., and Rigaud M. Molecular characterization of L2 lipoxygenase from maize embryos. Plant Mol. Biol. 33 (1997) 605-614
28. Kanofsky J.R., and Axelrodll B. Singlet oxygen production by soybean lipoxygenase isozymes. J. Biol. Chem. 261 (1986) 1099-1104
29. Watanabel T., Shirai N., and Okadal H. Production and chemiluminescent free radical reactions of glyoxal in lipid peroxidation of linoleic acid by the ligninolytic enzyme, manganese peroxidase. Eur. J. Biochem. 268 (2001) 6114-6122
30. Whittaker M.M., Kersten P.J., and Cullen D. Identification of catalytic residues in glyoxal oxidase by targeted mutagenesis. J. Biol. Chem. 274 (1999) 36226-36232
31. Doehlert D.C., and Kuo T.M. Sugar metabolism in developing kernels of starch-deficient endosperm mutants of maize. Plant Physiol. 92 (1992) 990-994
32. Li B., Geiger D.R., and Shieh W.J. Evidence for circadian regulation of starch and sucrose synthesis in sugar beet leaves. Plant Physiol. 99 (1992) 1393-1399
33. Mathlouthi N., Saulnier L., and Quemener B. Xylanase, beta-glucanase, and other side enzymatic activities have greater effects on the viscosity of several feedstuffs than xylanase and beta-glucanase used alone or in combination. J. Agric. Food Chem. 50 (2002) 5121-5127
34. Falk A., and Rask L. Expression of a zeatin-O-glucoside-degrading β-glucosidase in Brassica napus. Plant Physiol. 108 (1995) 1369-1377
35. Duroux L., Delmotte F.M., and Lancelin J.M. Insight into naphthoquinone metabolism: β-glucosidase-catalysed hydrolysis of hydrojuglone β-d-glucopyranoside. Biochem. J. 333 (1998) 275-283
36. Xu Z., Escamilla-Treviño L.L., and Zeng L. Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 1. Plant Mol. Biol. 55 (2004) 343-367
37. Lu H., and McKnight T.D. Tissue-specific expression of the β-subunit of tryptophan synthase in Camptotheca acuminata, an indole alkaloid-producing plant. Plant Physiol. 120 (1999) 43-51
38. Pruitt K.D., and Last R.L. Expression patterns of duplicate tryptophan synthase-6 genes in Arabidopsis thaliana. Plant Physiol. 102 (1993) 1019-1026
39. Roden L.T., Miflin B.J., and Freedman R.B. Protein disulfide-isomerase is located in the endoplasmic reticulum of developing wheat endosperm. FEBS Lett. 138 (1982) 121-124
40. Dunwell J.M., Purvis A., and Khuri S. Cupins: the most functionally diverse protein superfamily. Phytochemistry 65 (2004) 7-17
41. Grimes H.D., Overvoorde P.J., and Ripp K. A 62-kDa sucrose binding protein is expressed and localized in tissues actively engaged in sucrose transport. Plant Cell 4 (1992) 1561-1574
42. Zhou Y.C., Qu H.X., and Dibley K.E. A suite of sucrose transporters expressed in coats of developing legume seeds includes novel pH-independent facilitators. Plant J. 49 (2007) 750-764
43. +-ATPase is involved in the adaptation to phosphorus starvation in soybean seedlings. J. Exp. Bot. 57 (2006) 1353-1362
44. Gommel D.U., Memon A.R., and Lottspeich A.H.F. Recruitment to Golgi membranes of ADP-ribosylation factor1 is mediated by the cytoplasmic domain of p23. EMBO J. 20 (2001) 6751-6760
45. Memon A.R. The role of ADP-ribosylation factor and SAR1 in vesicular trafficking in plants. Biochim. Biophys. Acta 1664 (2004) 9-30
46. Malsam J., Gommel D., and Wieland F.T. A role of for ADP ribosylation factor in the control of cargo uptake during COPI-coated vesicle biogenesis. FEBS Lett. 462 (1999) 267-272
47. Wakana Y., Koyama S., and Nakajima K. Reticulon 3 is involved in membrane trafficking between the endoplasmic reticulum and Golgi. Biochem. Biophys. Res. 334 (2005) 1198-1205
48. Kalinski A., Loer D.S., and Weisemann J.M. Isoforms of soybean seed oils body membrane protein 24 kDa oleosin are encoded by closely related cDNAs. Plant Mol. Biol. 17 (1991) 1095-1098
49. Keddie J., Hubner G., and Slocombe S.P. Cloning and characterization of an oleosin gene from Brassica napus L. Plant Mol. Biol. 19 (1992) 443-453
50. Paris N., Rogers S.W., and Jiang L.W. Molecular cloning and further characterization of a probable plant vacuolar sorting receptor. Plant Physiol. 115 (1997) 29-39