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Volumn 73, Issue 9, 2008, Pages 825-833

Optimization of yeast cell cycle analysis and morphological characterization by multispectral imaging flow cytometry

Author keywords

Budding yeast; Cell cycle; MIFC; Multipectral imaging flow cytometry; Nap1

Indexed keywords

ALGORITHM; ANALYTIC METHOD; ARTICLE; CELL CYCLE G2 PHASE; CELL CYCLE M PHASE; CELL CYCLE REGULATION; CELL STRUCTURE; EUKARYOTIC CELL; FLOW CYTOMETRY; FUNGAL GENE; FUNGAL STRAIN; GENE OVEREXPRESSION; MULTISPECTRAL IMAGING FLOW CYTOMETRY; NAP1 GENE; NONHUMAN; PHENOTYPE; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; SACCHAROMYCES CEREVISIAE; THICKNESS; WILD TYPE; YEAST CELL;

EID: 51449087351     PISSN: 15524922     EISSN: 15524930     Source Type: Journal    
DOI: 10.1002/cyto.a.20609     Document Type: Article
Times cited : (54)

References (33)
  • 1
    • 34548566142 scopus 로고    scopus 로고
    • Niemisto A, Nykter M, Aho T, Jalovaara H, Marjanen K, Ahdesmaki M, Ruusuvuori P, Tiainen M, Linne ML, Yli-Harja O. Computational methods for estimation of cell cycle phase distributions of yeast cells. EURASIP J Bioinform Syst Biol 2007:46150.
    • Niemisto A, Nykter M, Aho T, Jalovaara H, Marjanen K, Ahdesmaki M, Ruusuvuori P, Tiainen M, Linne ML, Yli-Harja O. Computational methods for estimation of cell cycle phase distributions of yeast cells. EURASIP J Bioinform Syst Biol 2007:46150.
  • 2
    • 33846073419 scopus 로고    scopus 로고
    • Towards understanding of the complex structure of growing yeast populations
    • Cipollina C, Vai M, Porro D, Hatzis C. Towards understanding of the complex structure of growing yeast populations. J Biotechnol 2007;128:393-402.
    • (2007) J Biotechnol , vol.128 , pp. 393-402
    • Cipollina, C.1    Vai, M.2    Porro, D.3    Hatzis, C.4
  • 3
    • 33745184700 scopus 로고    scopus 로고
    • Morphologically-structured models of growing budding yeast populations
    • Hatzis C, Porro D. Morphologically-structured models of growing budding yeast populations. J Biotechnol 2006;124:420-438.
    • (2006) J Biotechnol , vol.124 , pp. 420-438
    • Hatzis, C.1    Porro, D.2
  • 4
    • 0004185006 scopus 로고    scopus 로고
    • Fantes P, Beggs J, editors, Oxford: Oxford University Press;
    • Fantes P, Beggs J, editors. The Yeast Nucleus. Oxford: Oxford University Press; 2000.
    • (2000) The Yeast Nucleus
  • 6
    • 0017527790 scopus 로고
    • Cell cycle of Saccharomyces cerevisiae in populations growing at different rates
    • Slater ML, Sharrow SO, Gart JJ. Cell cycle of Saccharomyces cerevisiae in populations growing at different rates. Proc Natl Acad Sci USA 1977;74:3850-3854.
    • (1977) Proc Natl Acad Sci USA , vol.74 , pp. 3850-3854
    • Slater, M.L.1    Sharrow, S.O.2    Gart, J.J.3
  • 7
    • 0029082391 scopus 로고
    • Cdc6 is an unstable protein whose de novo synthesis in G1 is important for the onset of S phase and for preventing a 'reductional' anaphase in the budding yeast Saccharomyces cerevisiae
    • Piatti S, Lengauer C, Nasmyth K. Cdc6 is an unstable protein whose de novo synthesis in G1 is important for the onset of S phase and for preventing a 'reductional' anaphase in the budding yeast Saccharomyces cerevisiae. EMBO J 1995;14:3788-3799.
    • (1995) EMBO J , vol.14 , pp. 3788-3799
    • Piatti, S.1    Lengauer, C.2    Nasmyth, K.3
  • 8
    • 0027220020 scopus 로고
    • CLB5 and CLB6, a new pair of B cyclins involved in DNA replication in Saccharomyces cerevisiae
    • Schwob E, Nasmyth K. CLB5 and CLB6, a new pair of B cyclins involved in DNA replication in Saccharomyces cerevisiae. Genes Dev 1993;7(7A):1160-1175.
    • (1993) Genes Dev , vol.7 , Issue.7 A , pp. 1160-1175
    • Schwob, E.1    Nasmyth, K.2
  • 9
    • 0018836879 scopus 로고
    • Cell cycle phase expansion in nitrogen-limited cultures of Saccharomyces cerevisiae
    • Rivin CJ, Fangman WL. Cell cycle phase expansion in nitrogen-limited cultures of Saccharomyces cerevisiae. J Cell Biol 1980;85:96-107.
    • (1980) J Cell Biol , vol.85 , pp. 96-107
    • Rivin, C.J.1    Fangman, W.L.2
  • 10
    • 0018222124 scopus 로고
    • Flow cytometric determinations of cellular substances in algae, bacteria, moulds and yeasts
    • Hutter KJ, Eipel HE. Flow cytometric determinations of cellular substances in algae, bacteria, moulds and yeasts. Antonie Van Leeuwenhoek 1978;44(3/4):269-282.
    • (1978) Antonie Van Leeuwenhoek , vol.44 , Issue.3-4 , pp. 269-282
    • Hutter, K.J.1    Eipel, H.E.2
  • 11
    • 0019032544 scopus 로고
    • A model for the computer analysis of synchronous DNA distributions obtained by flow cytometry
    • Fox MH. A model for the computer analysis of synchronous DNA distributions obtained by flow cytometry. Cytometry 1980;1:71-77.
    • (1980) Cytometry , vol.1 , pp. 71-77
    • Fox, M.H.1
  • 12
    • 0014393653 scopus 로고
    • Thymidine kinase: Evidence for its absence from Neurospora crassa and some other micro-organisms, and the relevance of this to the specific labelling of deoxyribonucleic acid
    • Grivell AR, Jackson JF. Thymidine kinase: Evidence for its absence from Neurospora crassa and some other micro-organisms, and the relevance of this to the specific labelling of deoxyribonucleic acid. J Gen Microbiol 1968;54:301-317.
    • (1968) J Gen Microbiol , vol.54 , pp. 301-317
    • Grivell, A.R.1    Jackson, J.F.2
  • 13
    • 1542504068 scopus 로고    scopus 로고
    • Analysis of the budding yeast Saccharomyces cerevisiae cell cycle by morphological criteria and flow cytometry
    • Zhang H, Siede W. Analysis of the budding yeast Saccharomyces cerevisiae cell cycle by morphological criteria and flow cytometry. Methods Mol Biol 2004;241:77-91.
    • (2004) Methods Mol Biol , vol.241 , pp. 77-91
    • Zhang, H.1    Siede, W.2
  • 14
    • 0028991340 scopus 로고
    • NAP1 acts with Clb1 to perform mitotic functions and to suppress polar bud growth in budding yeast
    • Kellogg DR, Murray AW. NAP1 acts with Clb1 to perform mitotic functions and to suppress polar bud growth in budding yeast. J Cell Biol 1995;130:675-685.
    • (1995) J Cell Biol , vol.130 , pp. 675-685
    • Kellogg, D.R.1    Murray, A.W.2
  • 20
    • 0023205561 scopus 로고
    • A pragmatic approach to the analysis of DNA histograms with a definable G1 peak
    • Watson JV, Chambers SH, Smith PJ. A pragmatic approach to the analysis of DNA histograms with a definable G1 peak. Cytometry 1987;8:1-8.
    • (1987) Cytometry , vol.8 , pp. 1-8
    • Watson, J.V.1    Chambers, S.H.2    Smith, P.J.3
  • 21
    • 2542447339 scopus 로고    scopus 로고
    • Ybr267w is a new cytoplasmic protein belonging to the mitotic signaling network of Saccharomyces cerevisiae
    • Iwase M, Toh-e A. Ybr267w is a new cytoplasmic protein belonging to the mitotic signaling network of Saccharomyces cerevisiae. Cell Struct Funct 2004;29:1-15.
    • (2004) Cell Struct Funct , vol.29 , pp. 1-15
    • Iwase, M.1    Toh-e, A.2
  • 22
    • 33845308211 scopus 로고    scopus 로고
    • Cytoplasmic Clb2 is required for timely inactivation of the mitotic inhibitor Swe1 and normal bud morphogenesis in Saccharomyces cerevisiae
    • Hood-DeGrenier JK, Boulton CN, Lyo V. Cytoplasmic Clb2 is required for timely inactivation of the mitotic inhibitor Swe1 and normal bud morphogenesis in Saccharomyces cerevisiae. Curr Genet 2007;51:1-18.
    • (2007) Curr Genet , vol.51 , pp. 1-18
    • Hood-DeGrenier, J.K.1    Boulton, C.N.2    Lyo, V.3
  • 23
    • 0036628541 scopus 로고    scopus 로고
    • Analysis of cell-cycle gene expression in Saccharomyces cerevisiae using microarrays and multiple synchronization methods
    • Shedden K, Cooper S. Analysis of cell-cycle gene expression in Saccharomyces cerevisiae using microarrays and multiple synchronization methods. Nucleic Acids Res 2002;30:2920-2929.
    • (2002) Nucleic Acids Res , vol.30 , pp. 2920-2929
    • Shedden, K.1    Cooper, S.2
  • 24
    • 0037007033 scopus 로고    scopus 로고
    • Analysis of cell-cycle-specific gene expression in human cells as determined by microarrays and double-thymidine block synchronization
    • Shedden K, Cooper S. Analysis of cell-cycle-specific gene expression in human cells as determined by microarrays and double-thymidine block synchronization. Proc Natl Acad Sci USA 2002;99:4379-4384.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 4379-4384
    • Shedden, K.1    Cooper, S.2
  • 25
    • 2442555885 scopus 로고    scopus 로고
    • Microarray analysis of gene expression during the cell cycle
    • Cooper S, Shedden K. Microarray analysis of gene expression during the cell cycle. Cell Chromosome 2003;2:1.
    • (2003) Cell Chromosome , vol.2 , pp. 1
    • Cooper, S.1    Shedden, K.2
  • 26
    • 0020039329 scopus 로고
    • Physiological characterization of Saccharomyces cerevisiae mutants supersensitive to G1 arrest by a factor and alpha factor pheromones
    • Chan RK, Otte CA. Physiological characterization of Saccharomyces cerevisiae mutants supersensitive to G1 arrest by a factor and alpha factor pheromones. Mol Cell Biol 1982;2:21-29.
    • (1982) Mol Cell Biol , vol.2 , pp. 21-29
    • Chan, R.K.1    Otte, C.A.2
  • 27
    • 0030453208 scopus 로고    scopus 로고
    • CDP1, a novel Saccharomyces cerevisiae gene required for proper nuclear division and chromosome segregation
    • Foreman PK, Davis RW. CDP1, a novel Saccharomyces cerevisiae gene required for proper nuclear division and chromosome segregation. Genetics 1996;144:1387-1397.
    • (1996) Genetics , vol.144 , pp. 1387-1397
    • Foreman, P.K.1    Davis, R.W.2
  • 28
    • 51449114063 scopus 로고    scopus 로고
    • Haase H. Current Protocols in Cytometry, 7.23: Cell Cycle Analysis of Budding Yeast Using SYTOX Green. New York: Wiley; 2003.
    • Haase H. Current Protocols in Cytometry, Vol. 7.23: Cell Cycle Analysis of Budding Yeast Using SYTOX Green. New York: Wiley; 2003.
  • 29
    • 85078505418 scopus 로고    scopus 로고
    • Improved flow cytometric analysis of the budding yeast cell cycle
    • Haase SB, Reed SI. Improved flow cytometric analysis of the budding yeast cell cycle. Cell Cycle 2002;1:132-136.
    • (2002) Cell Cycle , vol.1 , pp. 132-136
    • Haase, S.B.1    Reed, S.I.2
  • 30
    • 0030970040 scopus 로고    scopus 로고
    • Identification of different daughter and parent subpopulations in an asynchronously growing Saccharomyces cerevisiae population
    • Porro D, Martegani E, Ranzi BM, Alberghina L. Identification of different daughter and parent subpopulations in an asynchronously growing Saccharomyces cerevisiae population. Res Microbiol 1997;148:205-215.
    • (1997) Res Microbiol , vol.148 , pp. 205-215
    • Porro, D.1    Martegani, E.2    Ranzi, B.M.3    Alberghina, L.4
  • 31
    • 0029094875 scopus 로고
    • A double flow cytometric tag allows tracking of the dynamics of cell cycle progression of newborn Saccharomyces cerevisiae cells during balanced exponential growth
    • Porro D, Ranzi BM, Smeraldi C, Martegani E, Alberghina L. A double flow cytometric tag allows tracking of the dynamics of cell cycle progression of newborn Saccharomyces cerevisiae cells during balanced exponential growth. Yeast 1995;11:1157-1169.
    • (1995) Yeast , vol.11 , pp. 1157-1169
    • Porro, D.1    Ranzi, B.M.2    Smeraldi, C.3    Martegani, E.4    Alberghina, L.5
  • 32
    • 0029080942 scopus 로고
    • Members of the NAP/SET family of proteins interact specifically with B-type cyclins
    • Kellogg DR, Kikuchi A, Fujii-Nakata T, Turck CW, Murray AW. Members of the NAP/SET family of proteins interact specifically with B-type cyclins. J Cell Biol 1995;130:661-673.
    • (1995) J Cell Biol , vol.130 , pp. 661-673
    • Kellogg, D.R.1    Kikuchi, A.2    Fujii-Nakata, T.3    Turck, C.W.4    Murray, A.W.5
  • 33
    • 0030742542 scopus 로고    scopus 로고
    • Control of mitotic events by Nap1 and the Gin4 kinase
    • Altman R, Kellogg D. Control of mitotic events by Nap1 and the Gin4 kinase. J Cell Biol 1997;138:119-130.
    • (1997) J Cell Biol , vol.138 , pp. 119-130
    • Altman, R.1    Kellogg, D.2


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