Integrated profiling of cell surface protein and nuclear marker for discriminant analysis

2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI

Volumn , Issue , 2008, Pages 1343-1346

  Han, Ju ^a   Chang, Hang ^a   Andarawewa, Kumari ^a   Yaswen, Paul ^a   Barcellos Hoff, Mary Helen ^a   Parvin, Bahram ^a  

^a LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

Author keywords

Cadherin; Irradiation; Multivariate analysis of imaging assay; Segmentation

Indexed keywords

CELLS; DISCRIMINANT ANALYSIS; DNA; GENES; MEMBRANES; NUCLEIC ACIDS; ORGANIC ACIDS; PROTEINS; SENSITIVITY ANALYSIS; TECHNICAL PRESENTATIONS;

CADHERIN; IRRADIATION; MEMBRANE PROTEINS; MULTIVARIATE ANALYSIS OF IMAGING ASSAY; SEGMENTATION;

CELL MEMBRANES;

EID: 51249104275     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ISBI.2008.4541253     Document Type: Conference Paper

References (9)

1. U. Cavallaro and G. Christofori, "Cell adhesion and signalling: implications for tumour progression," Nat Rev Cancer, vol. 11, no. 12, pp. 118-32, 2004.
2. N.L. Prigozhina and L. Zhong et al., "Plasma membrane assays and three-compartment image cytometry for high content screening," Assay Drug Dev Technol, vol. 11, no. 12, pp. 29-48, 2007.
3. L.H. Loo, L.F. Wu, and S.J. Altschuler, "Image-based multivariate profiling of drug responses from single cells," Nature Method, vol. 4, no. 5, pp. 445-453, 2007.
4. M.R. Lamprecht, D.M. Sabatini, and A.E. Capenter, "Cellprofiler: free, versatile software for automated biological image analysis," Biotechniques, vol. 42, pp. 71-75, 2007.
5. S. Raman and C.A. Maxwell et al., "Geometric approach to segmentation and protein localization in cell culture assays," J Microscopy, vol. 225, no. 1, pp. 22-30, 2007.
6. H. Chang and K.L. Andarawewa et.al, "Perceptual grouping of membrane signals in cell-based assays," in Proc IEEE Int Symp on Biomedical Imaging, 2007, pp. 532-535.
7. C. Xu and J.L. Prince, "Gradient vector flow: A new external force for snakes," in Proc CVPR, 1997, pp. 66-71.
8. R.A. Young, R.M. Lesperance, and W.W. Meyer, "The gaussian derivative model for spatial-temporal vision: I. cortical model," Spatial Vision, vol. 14, pp. 261-319, 2001.
9. M.H. Barcellos-Hoff, "Radiation-induced changes in transforming growth factor e1 and subsequent extracellular matrix reorganization in irradiated murine mammary gland," Cancer Res, vol. 53, pp. 3880-3886, 1993.