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1
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0036139314
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A neural network classifier capable of recognizing the patterns of all major subcellular structures in fluorescence microscope images of HeLa cells
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M. V. Boland and R. F. Murphy, "A neural network classifier capable of recognizing the patterns of all major subcellular structures in fluorescence microscope images of HeLa cells," Bioinformatics, vol. 17, pp. 1213-1223, 2001.
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(2001)
Bioinformatics
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Boland, M.V.1
Murphy, R.F.2
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2
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3042565868
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Automatic identification of subcellular phenotypes on human cell arrays
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C. Conrad, H. Erfle, P. Warnat, N. Daigle, T. Lorch, J. Ellenberg, R. Pepperkok, and R. Eils, "Automatic identification of subcellular phenotypes on human cell arrays," Genome Research, vol. 14, pp. 1130-1136, 2004.
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Genome Research
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Conrad, C.1
Erfle, H.2
Warnat, P.3
Daigle, N.4
Lorch, T.5
Ellenberg, J.6
Pepperkok, R.7
Eils, R.8
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3
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34147187876
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Fast automated cell phenotype image classification
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N. Hamilton, R. Pantelic, K. Hanson, and R. Teasdale, "Fast automated cell phenotype image classification," BMC Bioinformatics, vol. 8, pp. 110, 2007.
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(2007)
BMC Bioinformatics
, vol.8
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Hamilton, N.1
Pantelic, R.2
Hanson, K.3
Teasdale, R.4
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4
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0141921564
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Robust numerical features for description and classification of subcellular location patterns in fluorescence microscope images
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R. F. Murphy, M. Velliste, and G. Porreca, "Robust numerical features for description and classification of subcellular location patterns in fluorescence microscope images," J VLSI Sig Proc, vol. 35, pp. 311-321, 2003.
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(2003)
J VLSI Sig Proc
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Murphy, R.F.1
Velliste, M.2
Porreca, G.3
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5
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33845760114
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Automated Subcellular Location Determination and High Throughput Microscopy
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E. Glory and R. F. Murphy, "Automated Subcellular Location Determination and High Throughput Microscopy," Developmental Cell vol. 12, pp. 7-16, 2007.
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(2007)
Developmental Cell
, vol.12
, pp. 7-16
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Glory, E.1
Murphy, R.F.2
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6
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34249666037
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Large-Scale Automated Analysis of Location Patterns in Randomly Tagged 3T3 Cells
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E. Garcia Osuna, J. Hua, N. Bateman, T. Zhao, P. Berget, and R. Murphy, "Large-Scale Automated Analysis of Location Patterns in Randomly Tagged 3T3 Cells," Annals Biomed. Eng, vol. 35, pp. 1081-1087, 2007.
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(2007)
Annals Biomed. Eng
, vol.35
, pp. 1081-1087
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Garcia Osuna, E.1
Hua, J.2
Bateman, N.3
Zhao, T.4
Berget, P.5
Murphy, R.6
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7
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0142184341
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Global analysis of protein localization in budding yeast
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W.-K. Huh, J. V. Falvo, L. C. Gerke, A. S. Carroll, R. W. Howson, J. S. Weissman, and E. K. O'Shea, "Global analysis of protein localization in budding yeast," Nature, vol. 425, pp. 686-691, 2003.
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(2003)
Nature
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Huh, W.-K.1
Falvo, J.V.2
Gerke, L.C.3
Carroll, A.S.4
Howson, R.W.5
Weissman, J.S.6
O'Shea, E.K.7
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8
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50249090921
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A novel graphical model approach to segmenting cell images
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S.-C. Chen, T. Zhao, G. J. Gordon, and R. F. Murphy, "A novel graphical model approach to segmenting cell images," Proceedings of the IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, pp. 1-8, 2006.
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(2006)
Proceedings of the IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology
, pp. 1-8
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Chen, S.-C.1
Zhao, T.2
Gordon, G.J.3
Murphy, R.F.4
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9
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34547830883
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Automated Image Analysis of Protein Localization in Budding Yeast
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S.-C. Chen, T. Zhao, G. J. Gordon, and R. F. Murphy, "Automated Image Analysis of Protein Localization in Budding Yeast," Bioinformatics vol. 23, pp. i66-i71, 2007.
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(2007)
Bioinformatics
, vol.23
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Chen, S.-C.1
Zhao, T.2
Gordon, G.J.3
Murphy, R.F.4
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10
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29244477844
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A human protein atlas for normal and cancer tissues based on antibody proteomics
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M. Uhlen, E. Bjorling, C. Agaton, C. A.-K. Szigyarto, B. Amini, E. Andersen, A.-C. Andersson, P. Angelidou, A. Asplund, D. Cerjan, M. Ekstrom, A. Elobeid, and C. Eriksson, "A human protein atlas for normal and cancer tissues based on antibody proteomics," Amer Soc Biochem Mol Biol, vol. 4, pp. 1920-1932, 2005.
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(2005)
Amer Soc Biochem Mol Biol
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Uhlen, M.1
Bjorling, E.2
Agaton, C.3
Szigyarto, C.A.-K.4
Amini, B.5
Andersen, E.6
Andersson, A.-C.7
Angelidou, P.8
Asplund, A.9
Cerjan, D.10
Ekstrom, M.11
Elobeid, A.12
Eriksson, C.13
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11
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49849090542
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A Framework for the Automated Analysis of Subcellular Patterns in Human Protein Atlas Images, J. Proteome Res.,
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in press
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J. Newberg and R. Murphy, "A Framework for the Automated Analysis of Subcellular Patterns in Human Protein Atlas Images," J. Proteome Res., pp. in press, 2008.
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(2008)
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Newberg, J.1
Murphy, R.2
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12
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0036795576
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In vivo functional proteomics: Mammalian genome annotation using CD-tagging
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J. W. Jarvik, G. W. Fisher, C. Shi, L. Hennen, C. Hauser, S. Adler, and P. B. Berget, "In vivo functional proteomics: Mammalian genome annotation using CD-tagging," BioTechniques, vol. 33, pp. 852-867, 2002.
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BioTechniques
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Jarvik, J.W.1
Fisher, G.W.2
Shi, C.3
Hennen, L.4
Hauser, C.5
Adler, S.6
Berget, P.B.7
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13
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0242410975
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Location proteomics - Building subcellular location trees from high resolution 3D fluorescence microscope images of randomly-tagged proteins
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X. Chen, M. Velliste, S. Weinstein, J. W. Jarvik, and R. F. Murphy, "Location proteomics - Building subcellular location trees from high resolution 3D fluorescence microscope images of randomly-tagged proteins," Proceedings of SPIE, vol. 4962, pp. 298-306, 2003.
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(2003)
Proceedings of SPIE
, vol.4962
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Chen, X.1
Velliste, M.2
Weinstein, S.3
Jarvik, J.W.4
Murphy, R.F.5
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14
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15844414198
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Objective clustering of proteins based on subcellular location patterns
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X. Chen and R. F. Murphy, "Objective clustering of proteins based on subcellular location patterns," J Biomed Biotechnol, vol. 2005, pp. 87-95, 2005.
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(2005)
J Biomed Biotechnol
, vol.2005
, pp. 87-95
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Chen, X.1
Murphy, R.F.2
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15
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33749867157
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Analyzing proteome topology and function by automated multi-dimensional fluorescence microscopy
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W. Schubert, B. Bonnekoh, A. J. Pmmer, L. Philipsen, R. Bockelmann, Y. Malykh, H. Gollnick, M. Friedenberger, M. Bode, and A. W. M. Dress, "Analyzing proteome topology and function by automated multi-dimensional fluorescence microscopy," Nat Biotechnol, vol. 24, pp. 1270-1278, 2006.
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(2006)
Nat Biotechnol
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Schubert, W.1
Bonnekoh, B.2
Pmmer, A.J.3
Philipsen, L.4
Bockelmann, R.5
Malykh, Y.6
Gollnick, H.7
Friedenberger, M.8
Bode, M.9
Dress, A.W.M.10
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16
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36849013487
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Automated learning of generative models for subcellular location: Building blocks for systems biology
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T. Zhao and R. F. Murphy, "Automated learning of generative models for subcellular location: building blocks for systems biology," Cytometry A, vol. 71, pp. 978-90, 2007.
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(2007)
Cytometry A
, vol.71
, pp. 978-990
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Zhao, T.1
Murphy, R.F.2
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17
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0037024592
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The virtual cell: An integrated modeling environment for experimental and computational cell biology
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Moraru, II, J. C. Schaff, B. M. Slepchenko, and L. M. Loew, "The virtual cell: an integrated modeling environment for experimental and computational cell biology," Ann N Y Acad Sci, vol. 971, pp. 595-6, 2002.
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Ann N Y Acad Sci
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Moraru II, J.1
Schaff, C.2
Slepchenko, B.M.3
Loew, L.M.4
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18
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22244450050
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Evidence for Ectopic Neurotransmission at a Neuronal synapse
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J. S. Coggan, T. M. Bartol, E. Esquenazi, J. R. Stiles, S. Lamont, M. E. Martone, D. K. Berg, M. H. Ellisman, and T. J. Sejnowski, "Evidence for Ectopic Neurotransmission at a Neuronal synapse," Science, vol. 309, pp. 446-451, 2005.
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Science
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, pp. 446-451
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Coggan, J.S.1
Bartol, T.M.2
Esquenazi, E.3
Stiles, J.R.4
Lamont, S.5
Martone, M.E.6
Berg, D.K.7
Ellisman, M.H.8
Sejnowski, T.J.9
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