Circulation of 3 lineages of a novel saffold cardiovirus in humans

Emerging Infectious Diseases

Volumn 14, Issue 9, 2008, Pages 1398-1405

  Drexler, Jan Felix ^a,b   De Souza Luna, Luciano Kleber ^b   Stöcker, Andreas ^a   Silva Almeida, Patrícia ^a   Medrado Ribeiro, Tereza Cristina ^a   Petersen, Nadine ^b   Herzog, Petra ^b   Pedroso, Célia ^a   Huppertz, Hans Iko ^c   Da Costa Ribeiro Jr , Hugo ^a   Baumgarte, Sigrid ^d   Drosten, Christian ^e  

^a FEDERAL UNIVERSITY OF BAHIA   (Brazil)

^b BERNHARD NOCHT INSTITUTE FOR TROPICAL MEDICINE   (Germany)

^c Prof Hess Kinderklinik   (Germany)

^d Dr Brill Partner GmbH Institute for Hygiene and Microbiology   (Germany)

^e UNIVERSITY OF BONN   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CARDIOVIRUS; CONTROLLED STUDY; DISEASE ASSOCIATION; FEMALE; GENE SEQUENCE; GENETIC LINKAGE; HUMAN; INFANT; MAJOR CLINICAL STUDY; MALE; NEWBORN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRESCHOOL CHILD; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SYMPTOMATOLOGY; VIRUS CLASSIFICATION; VIRUS IDENTIFICATION; VIRUS INFECTION; VIRUS LOAD;

ADOLESCENT; ADULT; AGED; AGED, 80 AND OVER; BASE SEQUENCE; BRAZIL; CARDIOVIRUS; CARDIOVIRUS INFECTIONS; CHILD; CHILD, PRESCHOOL; FECES; GASTROENTERITIS; GERMANY; HUMANS; INFANT; INFANT, NEWBORN; MIDDLE AGED; OLIGONUCLEOTIDES; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, VIRAL;

EID: 50849087373     PISSN: 10806040     EISSN: 10806059     Source Type: Journal    
DOI: 10.3201/eid1409.080570     Document Type: Article

References (38)

1. Stanway G, Brown F, Christian P, Hovi T, Hyypiä T, King AMQ, et al. Family Picornaviridae. In: Fauquet CM, Mayo MA, Maniloff J, Desselberger U, Ball LA, editors. Virus taxonomy: eighth report of the International Committee on Taxonomy of Viruses. London: Elsevier/Academic Press; 2005. p. 757-78.
2. Yoon JW, Jun HS. Viruses in type 1 diabetes: brief review. ILAR J. 2004;45:343-8.
3. Craighead JE, Huber SA, Haynes MK. Diverse patterns of immune and non-immune-mediated disease in EMC M-variant-infected mice. J Autoimmun. 1990;3(Suppl 1):27-9. DOI: 10.1016/0896-8411(90)90033-O
4. Oleszak EL, Chang JR, Friedman H, Katsetos CD, Platsoucas CD. Theiler's virus infection: a model for multiple sclerosis. Clin Microbiol Rev. 2004;17:174-207. DOI: 10.1128/CMR.17.1.174-207.2004
5. Brahic M, Bureau JF, Michiels T. The genetics of the persistent infection and demyelinating disease caused by Theiler's virus. Annu Rev Microbiol. 2005;59:279-98. DOI: 10.1146/annurev. micro.59.030804.121242
6. LaRue R, Myers S, Brewer L, Shaw DP, Brown C, Seal BS, et al. A wild-type porcine encephalomyocarditis virus containing a short poly(C) tract is pathogenic to mice, pigs, and cynomolgus macaques. J Virol. 2003;77:9136-46. DOI: 10.1128/JVI.77.17.9136-9146.2003
7. Knowles NJ, Dickinson ND, Wilsden G, Carra E, Brocchi E, De Simone F. Molecular analysis of encephalomyocarditis viruses isolated from pigs and rodents in Italy. Virus Res. 1998;57:53-62. DOI: 10.1016/S0168-1702(98)00081-1
8. Kirkland PD, Gleeson AB, Hawkes RA, Naim HM, Boughton CR. Human infection with encephalomyocarditis virus in New South Wales. Med J Aust. 1989;151:176, 178.
9. Grobler DG, Raath JP, Braack LE, Keet DF, Gerdes GH, Barnard BJ, et al. An outbreak of encephalomyocarditis-virus infection in free-ranging African elephants in the Kruger National Park. Onderstepoort J Vet Res. 1995;62:97-108.
10. Vladimirtsev VA, Nikitina RS, Renwick N, Ivanova AA, Danilova AP, Platonov FA, et al. Family clustering of Viliuisk encephalomyelitis in traditional and new geographic regions. Emerg Infect Dis. 2007;13:1321-6.
11. Pritchard AE, Strom T, Lipton HL. Nucleotide sequence identifies Vilyuisk virus as a divergent Theiler's virus. Virology. 1992;191:469-72. DOI: 10.1016/0042-6822(92)90212-8
12. Lipton HL, Friedmann A, Sethi P, Crowther JR. Characterization of Vilyuisk virus as a picornavirus. J Med Virol. 1983;12:195-203. DOI: 10.1002/jmv.1890120305
13. Goldfarb LG, Gajdusek DC. Viliuisk encephalomyelitis in the Iakut people of Siberia. Brain. 1992;115:961-78. DOI: 10.1093/brain/115.4.961
14. Petrov PA. V. Vilyuisk encephalitis in the Yakut Republic (U.S.S.R). Am J Trop Med Hyg. 1970;19:146-50.
15. Sarmanova ES, Chumachenko GG. Etiologic studies of Viliuisk encephalomyelitis. 3. Serologic studies. Current Problems in Medical Virology. 1960;1:216-9.
16. Jones MS, Lukashov VV, Ganac RD, Schnurr DP. Discovery of a novel human picornavirus in a stool sample from a pediatric patient presenting with fever of unknown origin. J Clin Microbiol. 2007;45:2144-50. DOI: 10.1128/JCM.00174-07
17. Abed Y, Boivin G. New Saffold cardioviruses in 3 children, Canada. Emerg Infect Dis. 2008;14:834-6.
18. Zhang Z, Mitchell DK, Afflerbach C, Jakab F, Walter J, Zhang YJ, et al. Quantitation of human astrovirus by real-time reverse-transcription-polymerase chain reaction to examine correlation with clinical illness. J Virol Methods. 2006;134:190-6. DOI: 10.1016/j.jviromet.2006.01.009
19. Verstrepen WA, Kuhn S, Kockx MM, Van De Vyvere ME, Mertens AH. Rapid detection of enterovirus RNA in cerebrospinal fluid specimens with a novel single-tube real-time reverse transcription-PCR assay. J Clin Microbiol. 2001;39:4093-6. DOI: 10.1128/JCM.39.11.4093-4096.2001
20. Logan C, O'Leary JJ, O'Sullivan N. Real-time reverse transcription-PCR for detection of rotavirus and adenovirus as causative agents of acute viral gastroenteritis in children. J Clin Microbiol. 2006;44:3189-95. DOI: 10.1128/JCM.00915-06
21. Hoehne M, Schreier E. Detection of Norovirus genogroup I and II by multiplex real-time RT- PCR using a 3?-minor groove binder-DNA probe. BMC Infect Dis. 2006;6:69. DOI: 10.1186/1471-2334-6-69
22. Chmielewicz B, Nitsche A, Schweiger B, Ellerbrok H. Development of a PCR-based assay for detection, quantification, and genotyping of human adenoviruses. Clin Chem. 2005;51:1365-73. DOI: 10.1373/clinchem.2004.045088
23. Baumgarte S, de Souza Luna LK, Grywna K, Panning M, Drexler JF, Karsten C, et al. Prevalence, types, and RNA concentrations of human parechoviruses, including a sixth parechovirus type, in stool samples from patients with acute enteritis. J Clin Microbiol. 2008;46:242-8. DOI: 10.1128/JCM.01468-07
24. Tamura K, Dudley J, Nei M, Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol. 2007;24:1596-9. DOI: 10.1093/molbev/msm092
25. Stanway G, Joki-Korpela P, Hyypia T. Human parechoviruses - biology and clinical significance. Rev Med Virol. 2000;10:57-69. DOI: 10.1002/(SICI)1099- 1654(200001/02)10:1〈57::AID-RMV266〉3.0.CO;2-H
26. Stanway G, Kalkkinen N, Roivainen M, Ghazi F, Khan M, Smyth M, et al. Molecular and biological characteristics of echovirus 22, a representative of a new picornavirus group. J Virol. 1994;68:8232-8.
27. Brahic M, Bureau JF, McAllister A. Genetic determinants of the demyelinating disease caused by Theiler's virus. Microb Pathog. 1991;11:77-84. DOI: 10.1016/0882-4010(91)90001-Q
28. Zoecklein LJ, Pavelko KD, Gamez J, Papke L, McGavern DB, Ure DR, et al. Direct comparison of demyelinating disease induced by the Daniel's strain and BeAn strain of Theiler's murine encephalomyelitis virus. Brain Pathol. 2003;13:291-308.
29. Rozengurt N, Sanchez S. A spontaneous outbreak of Theiler's encephalomyelitis in a colony of severe combined immunodefi cient mice in the UK. Lab Anim. 1993;27:229-34. DOI: 10.1258/002367793780745507
30. Rodriguez M, Roos RP. Pathogenesis of early and late disease in mice infected with Theiler's virus, using intratypic recombinant GDVII/DA viruses. J Virol. 1992;66:217-25.
31. Adami C, Pritchard AE, Knauf T, Luo M, Lipton HL. A determinant for central nervous system persistence localized in the capsid of Theiler's murine encephalomyelitis virus by using recombinant viruses. J Virol. 1998;72:1662-5.
32. Jnaoui K, Michiels T. Adaptation of Theiler's virus to L929 cells: mutations in the putative receptor binding site on the capsid map to neutralization sites and modulate viral persistence. Virology. 1998;244:397-404. DOI: 10.1006/viro.1998.9134
33. McCright IJ, Tsunoda I, Whitby FG, Fujinami RS. Theiler's viruses with mutations in loop I of VP1 lead to altered tropism and pathogenesis. J Virol. 1999;73:2814-24.
34. Al-Sunaidi M, Williams CH, Hughes PJ, Schnurr DP, Stanway G. Analysis of a new human parechovirus allows the definition of parechovirus types and the identification of RNA structural domains. J Virol. 2007;81:1013-21. DOI: 10.1128/JVI.00584-06
35. Muir P, Kammerer U, Korn K, Mulders MN, Poyry T, Weissbrich B, et al. Molecular typing of enteroviruses: current status and future requirements. The European Union Concerted Action on Virus Meningitis and Encephalitis. Clin Microbiol Rev. 1998;11:202-27.
36. Allander T, Tammi MT, Eriksson M, Bjerkner A, Tiveljung-Lindell A, Andersson B. Cloning of a human parvovirus by molecular screening of respiratory tract samples. Proc Natl Acad Sci U S A. 2005;102:12891-6. DOI: 10.1073/pnas.0504666102
37. Allander T, Andreasson K, Gupta S, Bjerkner A, Bogdanovic G, Persson MA, et al. Identification of a third human polyomavirus. J Virol. 2007;81:4130-6. DOI: 10.1128/JVI.00028-07
38. Gaynor AM, Nissen MD, Whiley DM, Mackay IM, Lambert SB, Wu G, et al. Identification of a novel polyomavirus from patients with acute respiratory tract infections. PLoS Pathog. 2007;3:e64. DOI: 10.1371/journal.ppat.0030064